Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_J12
(1207 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026214-5|AAB71310.1| 525|Caenorhabditis elegans Hypothetical ... 188 9e-48
AL034489-1|CAA22461.1| 538|Caenorhabditis elegans Hypothetical ... 133 3e-31
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 32 0.93
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z74031-13|CAE54903.1| 383|Caenorhabditis elegans Hypothetical p... 31 1.6
Z74031-12|CAE54902.1| 460|Caenorhabditis elegans Hypothetical p... 31 1.6
Z74031-11|CAD54138.1| 474|Caenorhabditis elegans Hypothetical p... 31 1.6
U88179-4|AAU05547.1| 576|Caenorhabditis elegans Hypothetical pr... 30 3.8
U88179-3|AAX88809.1| 751|Caenorhabditis elegans Hypothetical pr... 30 3.8
U88179-2|AAU05546.1| 770|Caenorhabditis elegans Hypothetical pr... 30 3.8
Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical p... 29 5.0
Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr... 29 6.6
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr... 29 6.6
>AF026214-5|AAB71310.1| 525|Caenorhabditis elegans Hypothetical
protein F52H2.6 protein.
Length = 525
Score = 188 bits (457), Expect = 9e-48
Identities = 100/270 (37%), Positives = 149/270 (55%), Gaps = 12/270 (4%)
Frame = +2
Query: 248 RHSVVFKLXXAPKXHXXKVKXVQXQIKAWLSGDKSTHLCTARPTWQTMSFRHSMYKXTFT 427
R+ +V + AP H KVK +Q Q+K W + + L ARP W TMSFR +YK T
Sbjct: 48 RNRIVHAVNSAPNAHVRKVKHIQEQLKEWNDNGRKSKLVNARPGWLTMSFRFPLYKENAT 107
Query: 428 NIQIN-LVDVLEVDKENMTVRCEPLVTMGQLSRTXXXXXXXXXXXXXXDQLXXXXXXXXX 604
I + L D+L++D E MTV+ EP VTMGQLS+ D L
Sbjct: 108 KIATDKLFDILDLDVEKMTVKAEPGVTMGQLSQYLISRGYTLPVLPELDDLTVGGLINGC 167
Query: 605 XXXXXSHVHGLFQHVCLEYELVLADGSVVN-----CSKDENA----DLFYAVPWSYGTLG 757
S +G+FQH+C YE+V++DG + N +K E A LF+A+PWS GT+
Sbjct: 168 GVESGSFKYGMFQHICTGYEVVMSDGELKNVYPDSAAKTEQAKQDNSLFFAIPWSQGTIC 227
Query: 758 FLTSVVIKVIPAKKYVRIHYYPFNNLSDLAKRFSQESLKPNPH-QFVEALLYTXDSGVLM 934
FL + IK+IP KKYV++ Y LS++ ++ +++S + + + FVEAL++ + G +M
Sbjct: 228 FLVAATIKIIPCKKYVKLTYKKTETLSEMCEQLTEDSDRNSENVDFVEALMFNKEKGCIM 287
Query: 935 LGDMVDEVGRXGK-LNPIGVWHAEWFFKQV 1021
LG+ D + +NPIG W+ +WF+ V
Sbjct: 288 LGEFSDGPDTHDEVVNPIGRWYKKWFYTHV 317
>AL034489-1|CAA22461.1| 538|Caenorhabditis elegans Hypothetical
protein Y7A5A.1 protein.
Length = 538
Score = 133 bits (321), Expect = 3e-31
Identities = 74/261 (28%), Positives = 129/261 (49%), Gaps = 8/261 (3%)
Frame = +2
Query: 278 APKXHXXKVKXVQXQIKAW--LSGDKSTHLCTARPTWQTMSFRHSMYKXTFTNIQINLVD 451
A H +V+ +Q Q+ W L + LCTARP W ++S K + I+L D
Sbjct: 49 ATTSHQQRVQKIQDQVTEWSKLPDSEQKPLCTARPNWLSLSTTF-FDKRKCHQVPIDLHD 107
Query: 452 VLEVDKENMTVRCEPLVTMGQLSRTXXXXXXXXXXXXXXDQLXXXXXXXXXXXXXXSHVH 631
VL +D++N+TV EP +T+ ++ + SH
Sbjct: 108 VLSLDEKNLTVTVEPNITVREICKFLIPKGYTLAVTLEIGDATLGGLAFGVGMTTYSHKV 167
Query: 632 GLFQHVCLEYELVLADGSVVNCS-KDENADLFYAVPWSYGTLGFLTSVVIKVIPAKKYVR 808
GL+Q + YE+V ADG+V+ + +E++DLFY +PWS+GTLGFL + ++++ K YV
Sbjct: 168 GLYQEAIVSYEVVTADGNVITVTDSNEHSDLFYCLPWSHGTLGFLVGLTLRIVKVKPYVH 227
Query: 809 IHYYPFNNLSDLAKRFSQESLKPNPH----QFVEALLYTXDSGVLMLGDMVD-EVGRXGK 973
+ Y P ++ + K+ + S + + ++E +Y + V+M+G+ D + K
Sbjct: 228 MEYIPCHSQDEYCKKIMELSGATDKNTKVADYLEVTIYDKNEAVIMVGNFADVDSKSNAK 287
Query: 974 LNPIGVWHAEWFFKQVXXHXK 1036
+N + ++ WF+K V K
Sbjct: 288 VNDVCWFYKPWFYKHVETFLK 308
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 31.9 bits (69), Expect = 0.93
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = -2
Query: 690 TTEPSARTSSYSRHTC*KSPWTCDVVSTPVPITRPPTVSWSNSGTTGSAKPSGANVRDS* 511
TT+P+ T++ + T + T +TP T PT + + S TT + + +
Sbjct: 259 TTKPTTTTTTPTTTTTTPTTTTTTPTTTPTTTTTTPTTTTTESTTTETTSTTTPTTTTTA 318
Query: 510 PIVTRGSQRTVIFSLSTSKTSTR 442
P T + T F +T T+T+
Sbjct: 319 PTTTT-TASTTTFKTTTITTTTQ 340
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 31.5 bits (68), Expect = 1.2
Identities = 25/97 (25%), Positives = 41/97 (42%)
Frame = -2
Query: 732 TA*NRSAFSSLLQLTTEPSARTSSYSRHTC*KSPWTCDVVSTPVPITRPPTVSWSNSGTT 553
T + + SS LTTE R SS + T +P T + P+ + TVS T
Sbjct: 289 TTSSSTMLSSTTLLTTETETRESSSTGSTQTTTPSTEPSTTITTPMEQSSTVSSVQKTRT 348
Query: 552 GSAKPSGANVRDS*PIVTRGSQRTVIFSLSTSKTSTR 442
KPS + + + S + + S+S T+++
Sbjct: 349 SEDKPSSSTTVPTSASTSESSTSSPMAETSSSSTTSQ 385
>Z74031-13|CAE54903.1| 383|Caenorhabditis elegans Hypothetical
protein F32D8.12c protein.
Length = 383
Score = 31.1 bits (67), Expect = 1.6
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Frame = +2
Query: 629 HGLFQHVCLEYELVLADGSVVN------CSKDENADLFYAVPW--SYGTLGFLTSVVIKV 784
+G + + E+VLADG++++ C + +A + + S GTLG +T +KV
Sbjct: 75 YGTMKENVVNLEVVLADGTIIDTKGKGRCPRKSSAGFNFTELFVGSEGTLGIITEATVKV 134
Query: 785 IPAKKYVRIHYYPFNNLSDLA 847
P +++ F + + A
Sbjct: 135 HPRPQFLSAAVCSFPTVHEAA 155
>Z74031-12|CAE54902.1| 460|Caenorhabditis elegans Hypothetical
protein F32D8.12b protein.
Length = 460
Score = 31.1 bits (67), Expect = 1.6
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Frame = +2
Query: 629 HGLFQHVCLEYELVLADGSVVN------CSKDENADLFYAVPW--SYGTLGFLTSVVIKV 784
+G + + E+VLADG++++ C + +A + + S GTLG +T +KV
Sbjct: 152 YGTMKENVVNLEVVLADGTIIDTKGKGRCPRKSSAGFNFTELFVGSEGTLGIITEATVKV 211
Query: 785 IPAKKYVRIHYYPFNNLSDLA 847
P +++ F + + A
Sbjct: 212 HPRPQFLSAAVCSFPTVHEAA 232
>Z74031-11|CAD54138.1| 474|Caenorhabditis elegans Hypothetical
protein F32D8.12a protein.
Length = 474
Score = 31.1 bits (67), Expect = 1.6
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Frame = +2
Query: 629 HGLFQHVCLEYELVLADGSVVN------CSKDENADLFYAVPW--SYGTLGFLTSVVIKV 784
+G + + E+VLADG++++ C + +A + + S GTLG +T +KV
Sbjct: 166 YGTMKENVVNLEVVLADGTIIDTKGKGRCPRKSSAGFNFTELFVGSEGTLGIITEATVKV 225
Query: 785 IPAKKYVRIHYYPFNNLSDLA 847
P +++ F + + A
Sbjct: 226 HPRPQFLSAAVCSFPTVHEAA 246
>U88179-4|AAU05547.1| 576|Caenorhabditis elegans Hypothetical
protein R57.1b protein.
Length = 576
Score = 29.9 bits (64), Expect = 3.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 377 TWQTMSFRHSMYKXTFTNIQINLVDVLEVDK 469
TW T H+MY+ F+NI + D L V K
Sbjct: 535 TWDTYPLYHTMYETPFSNIHLLDTDNLSVHK 565
>U88179-3|AAX88809.1| 751|Caenorhabditis elegans Hypothetical
protein R57.1c protein.
Length = 751
Score = 29.9 bits (64), Expect = 3.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 377 TWQTMSFRHSMYKXTFTNIQINLVDVLEVDK 469
TW T H+MY+ F+NI + D L V K
Sbjct: 535 TWDTYPLYHTMYETPFSNIHLLDTDNLSVHK 565
>U88179-2|AAU05546.1| 770|Caenorhabditis elegans Hypothetical
protein R57.1a protein.
Length = 770
Score = 29.9 bits (64), Expect = 3.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 377 TWQTMSFRHSMYKXTFTNIQINLVDVLEVDK 469
TW T H+MY+ F+NI + D L V K
Sbjct: 554 TWDTYPLYHTMYETPFSNIHLLDTDNLSVHK 584
>Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical
protein D1086.6 protein.
Length = 282
Score = 29.5 bits (63), Expect = 5.0
Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 3/116 (2%)
Frame = -2
Query: 708 SSLLQLTTEPSARTSSYSRHTC*KSPWTCDVVSTPVPITRPPTVSWSNSGTTG-SAKPSG 532
SS Q TT PS T+ T +P T +TP T + + + GTT A PS
Sbjct: 144 SSTSQSTTTPSTTTTIIVSSTTTTNPTTSTTPTTPTTTTPTTSTTTTARGTTDIPAPPSV 203
Query: 531 ANVRDS*PIVTRGSQRTVIF--SLSTSKTSTRLICMLVNVXLYMLCRKDIVCHVGR 370
+ +Q T+ F + + + +C+ +N + L +D+ + G+
Sbjct: 204 VEKWCMKKLQKNNAQFTIDFIEEAESDEGTNAELCIYLNRAGFKLRLEDLTEYCGK 259
>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 29.1 bits (62), Expect = 6.6
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 112 LFRSKXKWPSQQQRFWXPSXVXSRWVLVILALXASVSGMEVMVDNQ 249
+F +W SQ + +W V R V V G++ M+DNQ
Sbjct: 1104 IFIDDYRWTSQLRYYWHLENVFIRVGTVSTRYDYEVQGVDCMIDNQ 1149
>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 29.1 bits (62), Expect = 6.6
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 112 LFRSKXKWPSQQQRFWXPSXVXSRWVLVILALXASVSGMEVMVDNQ 249
+F +W SQ + +W V R V V G++ M+DNQ
Sbjct: 1104 IFIDDYRWTSQLRYYWHLENVFIRVGTVSTRYDYEVQGVDCMIDNQ 1149
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,475,483
Number of Sequences: 27780
Number of extensions: 412598
Number of successful extensions: 1012
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3318157644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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