Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_J10
(1197 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132876-15|CAD21668.2| 722|Caenorhabditis elegans Hypothetical... 324 6e-89
AB096636-1|BAC76736.1| 722|Caenorhabditis elegans tyrosyl-tRNA ... 324 6e-89
AL132853-10|CAB60439.2| 417|Caenorhabditis elegans Hypothetical... 38 0.019
AL021470-5|CAE17953.1| 417|Caenorhabditis elegans Hypothetical ... 38 0.019
AB096635-1|BAC76735.1| 417|Caenorhabditis elegans tryptophanyl-... 38 0.019
U23510-6|AAC46784.2| 236|Caenorhabditis elegans Hypothetical pr... 33 0.40
Z48717-5|CAA88610.1| 519|Caenorhabditis elegans Hypothetical pr... 30 3.7
>AL132876-15|CAD21668.2| 722|Caenorhabditis elegans Hypothetical
protein Y105E8A.19 protein.
Length = 722
Score = 324 bits (797), Expect = 6e-89
Identities = 162/232 (69%), Positives = 187/232 (80%), Gaps = 2/232 (0%)
Frame = +3
Query: 225 LITRNLQXVLGDDKLTEILKQ--RDLKIYWGTATTGRPHVAYFVPMLKIADFLKAGCEVT 398
LI RNLQ LG DKLT+ L+ + +YWGTATTG+PHV Y VPM KIADFL+AG +VT
Sbjct: 22 LILRNLQESLGVDKLTKQLETPGKVPHVYWGTATTGKPHVGYLVPMRKIADFLQAGLKVT 81
Query: 399 ILFADLHAYLDNMKAPWELLALRTQYYEAAIKAMLTSIGVPLEKLKFVRGTEYQLSKEYT 578
ILFADLHAYLDNMK+ WELL R YYE IKA+L S+ VP+E+L F +GTEYQLS+EYT
Sbjct: 82 ILFADLHAYLDNMKSSWELLKCRVIYYENVIKALLQSLDVPIEQLYFKKGTEYQLSREYT 141
Query: 579 LDVYRLSSVVTEHDAKKAGAEVVKQVEHPLLSGLLYPNLQALDEEYLKVDAQFGGVDQRK 758
DV RLS+ V++ DA KAGAEVVKQVE PLLSGLLYP LQALDE+YLKVD QFGGVDQRK
Sbjct: 142 DDVLRLSAQVSQRDALKAGAEVVKQVESPLLSGLLYPLLQALDEQYLKVDGQFGGVDQRK 201
Query: 759 IFTMSEKFLPQLGYAKRIHLMNPMVPGLTGGKMSASEADSKIDLLDTPTNVK 914
IF ++E+ LP+L KR HLMNPMVPGLTG KMS+SE DSKID+LD P V+
Sbjct: 202 IFILAEEQLPKLKLGKRWHLMNPMVPGLTGTKMSSSEEDSKIDVLDEPEKVR 253
Score = 101 bits (243), Expect = 8e-22
Identities = 69/242 (28%), Positives = 114/242 (47%), Gaps = 7/242 (2%)
Frame = +3
Query: 210 QXKXHLITRNLQXVLGDDK---LTEILKQRDLKIYWGTATTGRPHVAYFVPMLKIADFLK 380
Q K L+ N + ++G++ L ++ Q+ L + + GR H+ + P+LKI +
Sbjct: 374 QWKDQLLNGN-EILIGEELDRVLADVSPQKPLHLMFIAPGKGRFHLGFIAPLLKIKEISD 432
Query: 381 AG---CEVTILFADLHAYLDNMKAPWELLALRTQYYEAAIKAMLTSIGVP-LEKLKFVRG 548
AG TIL + L A+LDN K W + R Y+ +++ + + L K++
Sbjct: 433 AGGVPVIATILVSPLEAFLDNEKVAWAAIQSRAVYFREMFISLIKHLKLDGLVKVEIAGE 492
Query: 549 TEYQLSKEYTLDVYRLSSVVTEHDAKKAGAEVVKQVEHPLLSGLLYPNLQALDEEYLKVD 728
+ L +EY LD Y+++S V+ ++ LSG L P + AL+ + + D
Sbjct: 493 HDKYLDREYVLDFYKMASAVSRDESTVCDGNS--------LSGNLVPLIYALNAQMTRPD 544
Query: 729 AQFGGVDQRKIFTMSEKFLPQLGYAKRIHLMNPMVPGLTGGKMSASEADSKIDLLDTPTN 908
G D + + + L GY HL+ P +PG G KMS S D +D LDTP
Sbjct: 545 ILIIGADSQVFADLCSRLLRSFGYPAIAHLLIPTIPGCNGQKMSCSIPDFLLDPLDTPKQ 604
Query: 909 VK 914
+K
Sbjct: 605 LK 606
Score = 33.5 bits (73), Expect = 0.30
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 895 THQQMLKKAKKAFCEPGNISDNGVXSXTKHVVXPLM 1002
T +Q+ K ++FCEP N+ N +H+V P++
Sbjct: 601 TPKQLKTKIARSFCEPQNLDGNVAMQLAEHIVFPIL 636
>AB096636-1|BAC76736.1| 722|Caenorhabditis elegans tyrosyl-tRNA
synthetase (cytoplasmic)protein.
Length = 722
Score = 324 bits (797), Expect = 6e-89
Identities = 162/232 (69%), Positives = 187/232 (80%), Gaps = 2/232 (0%)
Frame = +3
Query: 225 LITRNLQXVLGDDKLTEILKQ--RDLKIYWGTATTGRPHVAYFVPMLKIADFLKAGCEVT 398
LI RNLQ LG DKLT+ L+ + +YWGTATTG+PHV Y VPM KIADFL+AG +VT
Sbjct: 22 LILRNLQESLGVDKLTKQLETPGKVPHVYWGTATTGKPHVGYLVPMRKIADFLQAGLKVT 81
Query: 399 ILFADLHAYLDNMKAPWELLALRTQYYEAAIKAMLTSIGVPLEKLKFVRGTEYQLSKEYT 578
ILFADLHAYLDNMK+ WELL R YYE IKA+L S+ VP+E+L F +GTEYQLS+EYT
Sbjct: 82 ILFADLHAYLDNMKSSWELLKCRVIYYENVIKALLQSLDVPIEQLYFKKGTEYQLSREYT 141
Query: 579 LDVYRLSSVVTEHDAKKAGAEVVKQVEHPLLSGLLYPNLQALDEEYLKVDAQFGGVDQRK 758
DV RLS+ V++ DA KAGAEVVKQVE PLLSGLLYP LQALDE+YLKVD QFGGVDQRK
Sbjct: 142 DDVLRLSAQVSQRDALKAGAEVVKQVESPLLSGLLYPLLQALDEQYLKVDGQFGGVDQRK 201
Query: 759 IFTMSEKFLPQLGYAKRIHLMNPMVPGLTGGKMSASEADSKIDLLDTPTNVK 914
IF ++E+ LP+L KR HLMNPMVPGLTG KMS+SE DSKID+LD P V+
Sbjct: 202 IFILAEEQLPKLKLGKRWHLMNPMVPGLTGTKMSSSEEDSKIDVLDEPEKVR 253
Score = 101 bits (243), Expect = 8e-22
Identities = 69/242 (28%), Positives = 114/242 (47%), Gaps = 7/242 (2%)
Frame = +3
Query: 210 QXKXHLITRNLQXVLGDDK---LTEILKQRDLKIYWGTATTGRPHVAYFVPMLKIADFLK 380
Q K L+ N + ++G++ L ++ Q+ L + + GR H+ + P+LKI +
Sbjct: 374 QWKDQLLNGN-EILIGEELDRVLADVSPQKPLHLMFIAPGKGRFHLGFIAPLLKIKEISD 432
Query: 381 AG---CEVTILFADLHAYLDNMKAPWELLALRTQYYEAAIKAMLTSIGVP-LEKLKFVRG 548
AG TIL + L A+LDN K W + R Y+ +++ + + L K++
Sbjct: 433 AGGVPVIATILVSPLEAFLDNEKVAWAAIQSRAVYFREMFISLIKHLKLDGLVKVEIAGE 492
Query: 549 TEYQLSKEYTLDVYRLSSVVTEHDAKKAGAEVVKQVEHPLLSGLLYPNLQALDEEYLKVD 728
+ L +EY LD Y+++S V+ ++ LSG L P + AL+ + + D
Sbjct: 493 HDKYLDREYVLDFYKMASAVSRDESTVCDGNS--------LSGNLVPLIYALNAQMTRPD 544
Query: 729 AQFGGVDQRKIFTMSEKFLPQLGYAKRIHLMNPMVPGLTGGKMSASEADSKIDLLDTPTN 908
G D + + + L GY HL+ P +PG G KMS S D +D LDTP
Sbjct: 545 ILIIGADSQVFADLCSRLLRSFGYPAIAHLLIPTIPGCNGQKMSCSIPDFLLDPLDTPKQ 604
Query: 909 VK 914
+K
Sbjct: 605 LK 606
Score = 33.5 bits (73), Expect = 0.30
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 895 THQQMLKKAKKAFCEPGNISDNGVXSXTKHVVXPLM 1002
T +Q+ K ++FCEP N+ N +H+V P++
Sbjct: 601 TPKQLKTKIARSFCEPQNLDGNVAMQLAEHIVFPIL 636
>AL132853-10|CAB60439.2| 417|Caenorhabditis elegans Hypothetical
protein Y80D3A.1 protein.
Length = 417
Score = 37.5 bits (83), Expect = 0.019
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +3
Query: 744 VDQRKIFTMSEKFLPQLGYAKRIHLMNPMVPGLTGG--KMSASEADSKIDLLDTPTNVK 914
+DQ F M+ P+L +K + + +P LTG KMSASE ++ I L DT +K
Sbjct: 258 IDQDPFFRMTRDVAPRLKASKPSLIFSTFLPALTGAQTKMSASEPNTCIFLSDTAKQIK 316
>AL021470-5|CAE17953.1| 417|Caenorhabditis elegans Hypothetical
protein Y80D3A.1 protein.
Length = 417
Score = 37.5 bits (83), Expect = 0.019
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +3
Query: 744 VDQRKIFTMSEKFLPQLGYAKRIHLMNPMVPGLTGG--KMSASEADSKIDLLDTPTNVK 914
+DQ F M+ P+L +K + + +P LTG KMSASE ++ I L DT +K
Sbjct: 258 IDQDPFFRMTRDVAPRLKASKPSLIFSTFLPALTGAQTKMSASEPNTCIFLSDTAKQIK 316
>AB096635-1|BAC76735.1| 417|Caenorhabditis elegans
tryptophanyl-tRNA synthetase (cytosolic)protein.
Length = 417
Score = 37.5 bits (83), Expect = 0.019
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +3
Query: 744 VDQRKIFTMSEKFLPQLGYAKRIHLMNPMVPGLTGG--KMSASEADSKIDLLDTPTNVK 914
+DQ F M+ P+L +K + + +P LTG KMSASE ++ I L DT +K
Sbjct: 258 IDQDPFFRMTRDVAPRLKASKPSLIFSTFLPALTGAQTKMSASEPNTCIFLSDTAKQIK 316
>U23510-6|AAC46784.2| 236|Caenorhabditis elegans Hypothetical
protein R12C12.5 protein.
Length = 236
Score = 33.1 bits (72), Expect = 0.40
Identities = 23/101 (22%), Positives = 49/101 (48%)
Frame = +3
Query: 426 LDNMKAPWELLALRTQYYEAAIKAMLTSIGVPLEKLKFVRGTEYQLSKEYTLDVYRLSSV 605
+ N++ ELL + +Y+E I+ + S ++ K + + K Y ++ R+ V
Sbjct: 40 IGNLRDAEELLIKKQEYFELRIEQEVESAKKYMKTNKKMALAALRKKKHYEQELSRIDGV 99
Query: 606 VTEHDAKKAGAEVVKQVEHPLLSGLLYPNLQALDEEYLKVD 728
+T+ +A++ E V H + +L + L +E+ K+D
Sbjct: 100 LTKLEAQRTALENVGM--HNEVIDVLGKTTETLKKEHAKMD 138
>Z48717-5|CAA88610.1| 519|Caenorhabditis elegans Hypothetical
protein T10B9.8 protein.
Length = 519
Score = 29.9 bits (64), Expect = 3.7
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +1
Query: 82 LVSICLQLVLKINLKISHFKITSIIQLDAINXRI 183
LV I Q++LK NLK+ F+ + I LDAI+ RI
Sbjct: 227 LVEIIRQILLK-NLKVGSFRKINEITLDAIHNRI 259
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,664,733
Number of Sequences: 27780
Number of extensions: 413608
Number of successful extensions: 965
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3286854270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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