Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_J09
         (1245 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0448 - 34005581-34005655,34005735-34005830,34006669-340076...    31   1.4  
02_05_1022 + 33570664-33570976,33572206-33573440,33573873-335740...    29   5.8  
06_03_1283 - 28957729-28959258,28959354-28959550,28959824-289600...    29   7.6  
03_02_0940 + 12583131-12583280,12583805-12583996,12584185-125843...    29   7.6  

>03_06_0448 - 34005581-34005655,34005735-34005830,34006669-34007616,
            34007684-34007851,34007908-34008099,34008164-34008346,
            34008414-34008590,34008667-34012074
          Length = 1748

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = +2

Query: 242  QNKTTEVFKNKCEQNGGPEAFNNAHNAFDQLTSCLQTLVNMEILQQELEEAKPNG 406
            +NK T++F+  C+ + G ++  +      Q T  +Q    ME+ +QE+EE +  G
Sbjct: 1151 ENKGTQMFQEGCKLDSGVKSDIDIMEIETQATEGIQNQETMELDKQEMEEEQNPG 1205


>02_05_1022 +
           33570664-33570976,33572206-33573440,33573873-33574013,
           33574242-33574796,33574914-33575015
          Length = 781

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 19/117 (16%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
 Frame = +2

Query: 266 KNKCEQNGGPEAFNNAHNAFDQLTSCLQ--TLVNMEILQQELEEAKPNGMIDEVFKKYCL 439
           +  C+Q GG     +AH+ FD++++C +  +   + +   ++     + ++ +V+  Y  
Sbjct: 124 QRNCQQLGGGVFGGDAHHLFDEMSTCPRGDSAAVLRVTVSQIIYPVTSEVLHQVYNTYGA 183

Query: 440 KKTNFMNCFTTMLDASKPCFTVKERDHLNTVYNVSRELADFVCFKDGDRIALFISEG 610
                +   T  + A     +  + +   +  +  R++ D  C  D   + +F  +G
Sbjct: 184 VAVQVLAVSTWQVKALVSFMSSHDAERARSATH-GRDIYDGGCLMDVQHVQMFPGDG 239


>06_03_1283 -
           28957729-28959258,28959354-28959550,28959824-28960026,
           28960097-28960424,28960524-28960661,28960765-28961020,
           28961529-28961626,28963104-28963367,28964395-28964584
          Length = 1067

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = -2

Query: 959 HG-PKSHCDSSHFRXXHVGRTRGHSPQLSDTPCR 861
           HG PK  C SSH    H  +  G S   SD PC+
Sbjct: 712 HGSPKKCCSSSH-HGSHAKKNHGVSHHCSDGPCK 744


>03_02_0940 +
           12583131-12583280,12583805-12583996,12584185-12584350,
           12584774-12584801,12585525-12585594,12586399-12586435,
           12587760-12588148
          Length = 343

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +3

Query: 546 GNWLTSFASKTVIELHCSSLKEERNVFKRSSLTCRSATIRQQ 671
           GN++TSFA K +       L E  N+ K  S   +SA ++QQ
Sbjct: 149 GNFVTSFAGKGLSPTDLVVLTEISNLRKNQSWKNKSAVVQQQ 190


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,940,430
Number of Sequences: 37544
Number of extensions: 439746
Number of successful extensions: 1137
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3841085160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)