Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_J09
         (1245 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    27   1.5  
DQ370046-1|ABD18607.1|  125|Anopheles gambiae putative secreted ...    26   2.0  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            24   8.0  

>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 26.6 bits (56), Expect = 1.5
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +2

Query: 458 NCFTTMLDASKPCFT--VKERDHLNTVYNVSRELA 556
           NC  ++L    P +   +KE+ H NTV  V R+LA
Sbjct: 817 NCAISVLRYGAPVWAHILKEKQHQNTVNKVHRKLA 851


>DQ370046-1|ABD18607.1|  125|Anopheles gambiae putative secreted
           polypeptide protein.
          Length = 125

 Score = 26.2 bits (55), Expect = 2.0
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 413 DEVFKKYCLKKTNFMNCFTTMLDASKPCF 499
           DEVFK  C      +NC+ T+LD +  C+
Sbjct: 58  DEVFK--CCGPCYQLNCYGTVLDCAGRCY 84


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 24.2 bits (50), Expect = 8.0
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -1

Query: 609 PSEMNNAILSPSLKQTKSASSRDT 538
           PS   ++  +P+ +Q+ SASS+DT
Sbjct: 666 PSSNQSSSSTPNAEQSPSASSKDT 689


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 963,080
Number of Sequences: 2352
Number of extensions: 18347
Number of successful extensions: 33
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 142243956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)