Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_J09
         (1245 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            24   3.2  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   7.3  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   7.3  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 633 FS*KHSAPPSEMNNAILSPSL 571
           F  K   PP++ N  ILSPS+
Sbjct: 349 FQSKDQGPPNDGNGNILSPSI 369


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 574 FEANEVSQFPGHIVHCVEMISL 509
           F   + S FPG+ + C E  SL
Sbjct: 92  FTTRDCSLFPGNALSCKETFSL 113


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -2

Query: 701 KSSNQS*RSALLSDCSTSASQTASLENIPLL 609
           K ++ S  SA  S CS+  S+   +E++P+L
Sbjct: 591 KPASSSASSAPTSVCSSPRSEDKEVEDMPVL 621


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 246,905
Number of Sequences: 438
Number of extensions: 4397
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 42502302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)