Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_J07
         (1237 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_03_0210 + 15470680-15470715,15473088-15473342,15473417-154734...    83   6e-16
07_03_1305 - 25638531-25638584,25638909-25638990,25639087-256391...    82   8e-16
04_04_0390 - 24882572-24882577,24882928-24883009,24883089-248832...    61   2e-09
02_05_1031 - 33626527-33626580,33627482-33627563,33628892-33628911     54   2e-07
09_06_0272 - 21962495-21962524,21962742-21962918                       31   2.5  
11_04_0415 - 17395988-17396161,17397349-17397444,17397489-173980...    29   10.0 
04_02_0017 - 8572400-8572732,8572818-8572919,8573138-8573230,857...    29   10.0 

>03_03_0210 +
           15470680-15470715,15473088-15473342,15473417-15473499,
           15473617-15473698,15474886-15474939
          Length = 169

 Score = 82.6 bits (195), Expect = 6e-16
 Identities = 31/61 (50%), Positives = 39/61 (63%)
 Frame = +2

Query: 194 FPXQNQXRHCYQSYVDFHRCQXVRGXKYXPCYXFKRVYRSLCPNEWVDKWDNQRAEGTFA 373
           FP  NQ RHC+  YV++HRC   +G     C  F + YRSLCP EWV++W+ QR  GTF 
Sbjct: 107 FPTTNQTRHCFTRYVEYHRCVAAKGEDAPECDKFAKYYRSLCPGEWVERWNEQRENGTFP 166

Query: 374 G 376
           G
Sbjct: 167 G 167


>07_03_1305 -
           25638531-25638584,25638909-25638990,25639087-25639169,
           25639252-25639515,25639984-25640060,25640183-25640277,
           25640953-25641065
          Length = 255

 Score = 82.2 bits (194), Expect = 8e-16
 Identities = 29/61 (47%), Positives = 40/61 (65%)
 Frame = +2

Query: 194 FPXQNQXRHCYQSYVDFHRCQXVRGXKYXPCYXFKRVYRSLCPNEWVDKWDNQRAEGTFA 373
           FP  NQ RHC+  Y+++HRC   +G     C  F + YRSLCP+EW+++W+ QR  GTF 
Sbjct: 193 FPTTNQTRHCFTRYIEYHRCVAAKGEGAPECEKFAKYYRSLCPSEWIERWNEQRENGTFP 252

Query: 374 G 376
           G
Sbjct: 253 G 253


>04_04_0390 -
           24882572-24882577,24882928-24883009,24883089-24883200,
           24883411-24883441
          Length = 76

 Score = 61.3 bits (142), Expect = 2e-09
 Identities = 22/46 (47%), Positives = 28/46 (60%)
 Frame = +2

Query: 194 FPXQNQXRHCYQSYVDFHRCQXVRGXKYXPCYXFKRVYRSLCPNEW 331
           FP  NQ RHC+  Y+++HRC   +G     C  F + YRSLCP EW
Sbjct: 30  FPTTNQTRHCFTRYIEYHRCVNAKGEATADCEKFAKYYRSLCPAEW 75


>02_05_1031 - 33626527-33626580,33627482-33627563,33628892-33628911
          Length = 51

 Score = 54.4 bits (125), Expect = 2e-07
 Identities = 20/42 (47%), Positives = 26/42 (61%)
 Frame = +2

Query: 251 CQXVRGXKYXPCYXFKRVYRSLCPNEWVDKWDNQRAEGTFAG 376
           C   +G     C  + + YRSLCP EW+++W  QRA GTFAG
Sbjct: 8   CIEAKGEGSDECTKYAKCYRSLCPGEWIERWKEQRANGTFAG 49


>09_06_0272 - 21962495-21962524,21962742-21962918
          Length = 68

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 389 GSKSYRRRCLRRAGCPTCRPTHWGRET 309
           G   +R++     G P CRP HW R T
Sbjct: 11  GGGDFRQKVWSMTGGPYCRPVHWRRNT 37


>11_04_0415 -
           17395988-17396161,17397349-17397444,17397489-17398026,
           17398106-17398422
          Length = 374

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
 Frame = -3

Query: 254 GNGGSPRNFGSSAAXDF-GXGXRGXKGAVLRSAG 156
           G GG PR FG      F G G RG  G   R  G
Sbjct: 11  GGGGGPRGFGGGGPRGFGGGGPRGFGGGGPRGFG 44


>04_02_0017 -
           8572400-8572732,8572818-8572919,8573138-8573230,
           8573391-8573519,8573781-8574025,8574184-8574453,
           8574590-8574752,8575965-8576063
          Length = 477

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = -3

Query: 437 DLIKTNRNKLKHRERLGSKSYR 372
           +L KTNR+K+K+    GS+SY+
Sbjct: 306 ELNKTNRSKVKYHHTTGSRSYK 327


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,447,706
Number of Sequences: 37544
Number of extensions: 322165
Number of successful extensions: 727
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3806166204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)