Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_J07
(1237 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X54473-1|CAA38352.1| 86|Homo sapiens cytochrome oxidase subuni... 89 3e-17
X13923-1|CAA32114.1| 86|Homo sapiens protein ( Human mRNA for ... 89 3e-17
CR542137-1|CAG46934.1| 86|Homo sapiens COX6B protein. 89 3e-17
CR456789-1|CAG33070.1| 86|Homo sapiens COX6B protein. 89 3e-17
BT006945-1|AAP35591.1| 86|Homo sapiens cytochrome c oxidase su... 89 3e-17
BC002478-1|AAH02478.1| 86|Homo sapiens cytochrome c oxidase su... 89 3e-17
BC001015-1|AAH01015.1| 86|Homo sapiens cytochrome c oxidase su... 89 3e-17
AC002115-3|AAB57628.1| 86|Homo sapiens COXG protein. 89 3e-17
BC100902-1|AAI00903.1| 88|Homo sapiens COX6B2 protein protein. 79 3e-14
BC100901-1|AAI00902.1| 88|Homo sapiens cytochrome c oxidase su... 79 3e-14
BC100900-1|AAI00901.1| 88|Homo sapiens cytochrome c oxidase su... 79 3e-14
BC100899-1|AAI00900.1| 88|Homo sapiens cytochrome c oxidase su... 79 3e-14
BC064548-1|AAH64548.1| 88|Homo sapiens cytochrome c oxidase su... 79 3e-14
BC026123-1|AAH26123.3| 88|Homo sapiens cytochrome c oxidase su... 79 3e-14
AY152398-1|AAN46751.1| 88|Homo sapiens cytochrome c oxidase su... 79 3e-14
AL031594-1|CAI21907.1| 108|Homo sapiens protein ( Human DNA seq... 53 2e-06
AJ291390-1|CAC19572.1| 901|Homo sapiens MUC3B mucin protein. 34 0.92
AK057427-1|BAB71481.1| 123|Homo sapiens protein ( Homo sapiens ... 31 6.5
BC030645-1|AAH30645.1| 364|Homo sapiens platelet derived growth... 31 8.6
AY359116-1|AAQ89474.1| 364|Homo sapiens SCDGF-B protein. 31 8.6
AY027518-1|AAK20082.1| 364|Homo sapiens iris-expressed growth f... 31 8.6
AY027517-1|AAK20081.1| 370|Homo sapiens iris-expressed growth f... 31 8.6
AK127688-1|BAC87085.1| 129|Homo sapiens protein ( Homo sapiens ... 31 8.6
AF336376-1|AAK56136.1| 370|Homo sapiens platelet-derived growth... 31 8.6
AF335584-1|AAK38840.1| 370|Homo sapiens platelet-derived growth... 31 8.6
AB033832-1|BAB18903.1| 370|Homo sapiens spinal cord-derived gro... 31 8.6
>X54473-1|CAA38352.1| 86|Homo sapiens cytochrome oxidase subunit
VIb protein.
Length = 86
Score = 89.0 bits (211), Expect = 3e-17
Identities = 37/66 (56%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
Frame = +2
Query: 194 FPXQNQXRHCYQSYVDFHRCQXV---RGXKYXPCYXFKRVYRSLCPNEWVDKWDNQRAEG 364
FP QNQ R+C+Q+Y+DFHRCQ +G C ++RVY+SLCP WV WD QRAEG
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEG 80
Query: 365 TFAGRI 382
TF G+I
Sbjct: 81 TFPGKI 86
>X13923-1|CAA32114.1| 86|Homo sapiens protein ( Human mRNA for
cytochrome c oxidase subunit VIb (EC 1.9.3.1). ).
Length = 86
Score = 89.0 bits (211), Expect = 3e-17
Identities = 37/66 (56%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
Frame = +2
Query: 194 FPXQNQXRHCYQSYVDFHRCQXV---RGXKYXPCYXFKRVYRSLCPNEWVDKWDNQRAEG 364
FP QNQ R+C+Q+Y+DFHRCQ +G C ++RVY+SLCP WV WD QRAEG
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEG 80
Query: 365 TFAGRI 382
TF G+I
Sbjct: 81 TFPGKI 86
>CR542137-1|CAG46934.1| 86|Homo sapiens COX6B protein.
Length = 86
Score = 89.0 bits (211), Expect = 3e-17
Identities = 37/66 (56%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
Frame = +2
Query: 194 FPXQNQXRHCYQSYVDFHRCQXV---RGXKYXPCYXFKRVYRSLCPNEWVDKWDNQRAEG 364
FP QNQ R+C+Q+Y+DFHRCQ +G C ++RVY+SLCP WV WD QRAEG
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEG 80
Query: 365 TFAGRI 382
TF G+I
Sbjct: 81 TFPGKI 86
>CR456789-1|CAG33070.1| 86|Homo sapiens COX6B protein.
Length = 86
Score = 89.0 bits (211), Expect = 3e-17
Identities = 37/66 (56%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
Frame = +2
Query: 194 FPXQNQXRHCYQSYVDFHRCQXV---RGXKYXPCYXFKRVYRSLCPNEWVDKWDNQRAEG 364
FP QNQ R+C+Q+Y+DFHRCQ +G C ++RVY+SLCP WV WD QRAEG
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEG 80
Query: 365 TFAGRI 382
TF G+I
Sbjct: 81 TFPGKI 86
>BT006945-1|AAP35591.1| 86|Homo sapiens cytochrome c oxidase
subunit VIb protein.
Length = 86
Score = 89.0 bits (211), Expect = 3e-17
Identities = 37/66 (56%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
Frame = +2
Query: 194 FPXQNQXRHCYQSYVDFHRCQXV---RGXKYXPCYXFKRVYRSLCPNEWVDKWDNQRAEG 364
FP QNQ R+C+Q+Y+DFHRCQ +G C ++RVY+SLCP WV WD QRAEG
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEG 80
Query: 365 TFAGRI 382
TF G+I
Sbjct: 81 TFPGKI 86
>BC002478-1|AAH02478.1| 86|Homo sapiens cytochrome c oxidase
subunit Vib polypeptide 1 (ubiquitous) protein.
Length = 86
Score = 89.0 bits (211), Expect = 3e-17
Identities = 37/66 (56%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
Frame = +2
Query: 194 FPXQNQXRHCYQSYVDFHRCQXV---RGXKYXPCYXFKRVYRSLCPNEWVDKWDNQRAEG 364
FP QNQ R+C+Q+Y+DFHRCQ +G C ++RVY+SLCP WV WD QRAEG
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEG 80
Query: 365 TFAGRI 382
TF G+I
Sbjct: 81 TFPGKI 86
>BC001015-1|AAH01015.1| 86|Homo sapiens cytochrome c oxidase
subunit Vib polypeptide 1 (ubiquitous) protein.
Length = 86
Score = 89.0 bits (211), Expect = 3e-17
Identities = 37/66 (56%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
Frame = +2
Query: 194 FPXQNQXRHCYQSYVDFHRCQXV---RGXKYXPCYXFKRVYRSLCPNEWVDKWDNQRAEG 364
FP QNQ R+C+Q+Y+DFHRCQ +G C ++RVY+SLCP WV WD QRAEG
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEG 80
Query: 365 TFAGRI 382
TF G+I
Sbjct: 81 TFPGKI 86
>AC002115-3|AAB57628.1| 86|Homo sapiens COXG protein.
Length = 86
Score = 89.0 bits (211), Expect = 3e-17
Identities = 37/66 (56%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
Frame = +2
Query: 194 FPXQNQXRHCYQSYVDFHRCQXV---RGXKYXPCYXFKRVYRSLCPNEWVDKWDNQRAEG 364
FP QNQ R+C+Q+Y+DFHRCQ +G C ++RVY+SLCP WV WD QRAEG
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEG 80
Query: 365 TFAGRI 382
TF G+I
Sbjct: 81 TFPGKI 86
>BC100902-1|AAI00903.1| 88|Homo sapiens COX6B2 protein protein.
Length = 88
Score = 79.0 bits (186), Expect = 3e-14
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Frame = +2
Query: 194 FPXQNQXRHCYQSYVDFHRCQXVR---GXKYXPCYXFKRVYRSLCPNEWVDKWDNQRAEG 364
FP QNQ R+CYQ+++D+HRC R G PC + RVY SLCP WV+ W+ Q G
Sbjct: 23 FPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNG 82
Query: 365 TFAGRI 382
FAG+I
Sbjct: 83 IFAGKI 88
>BC100901-1|AAI00902.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 79.0 bits (186), Expect = 3e-14
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Frame = +2
Query: 194 FPXQNQXRHCYQSYVDFHRCQXVR---GXKYXPCYXFKRVYRSLCPNEWVDKWDNQRAEG 364
FP QNQ R+CYQ+++D+HRC R G PC + RVY SLCP WV+ W+ Q G
Sbjct: 23 FPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNG 82
Query: 365 TFAGRI 382
FAG+I
Sbjct: 83 IFAGKI 88
>BC100900-1|AAI00901.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 79.0 bits (186), Expect = 3e-14
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Frame = +2
Query: 194 FPXQNQXRHCYQSYVDFHRCQXVR---GXKYXPCYXFKRVYRSLCPNEWVDKWDNQRAEG 364
FP QNQ R+CYQ+++D+HRC R G PC + RVY SLCP WV+ W+ Q G
Sbjct: 23 FPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNG 82
Query: 365 TFAGRI 382
FAG+I
Sbjct: 83 IFAGKI 88
>BC100899-1|AAI00900.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 79.0 bits (186), Expect = 3e-14
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Frame = +2
Query: 194 FPXQNQXRHCYQSYVDFHRCQXVR---GXKYXPCYXFKRVYRSLCPNEWVDKWDNQRAEG 364
FP QNQ R+CYQ+++D+HRC R G PC + RVY SLCP WV+ W+ Q G
Sbjct: 23 FPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNG 82
Query: 365 TFAGRI 382
FAG+I
Sbjct: 83 IFAGKI 88
>BC064548-1|AAH64548.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 79.0 bits (186), Expect = 3e-14
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Frame = +2
Query: 194 FPXQNQXRHCYQSYVDFHRCQXVR---GXKYXPCYXFKRVYRSLCPNEWVDKWDNQRAEG 364
FP QNQ R+CYQ+++D+HRC R G PC + RVY SLCP WV+ W+ Q G
Sbjct: 23 FPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNG 82
Query: 365 TFAGRI 382
FAG+I
Sbjct: 83 IFAGKI 88
>BC026123-1|AAH26123.3| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 79.0 bits (186), Expect = 3e-14
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Frame = +2
Query: 194 FPXQNQXRHCYQSYVDFHRCQXVR---GXKYXPCYXFKRVYRSLCPNEWVDKWDNQRAEG 364
FP QNQ R+CYQ+++D+HRC R G PC + RVY SLCP WV+ W+ Q G
Sbjct: 23 FPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNG 82
Query: 365 TFAGRI 382
FAG+I
Sbjct: 83 IFAGKI 88
>AY152398-1|AAN46751.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb testes-specific isoform precursor protein.
Length = 88
Score = 79.0 bits (186), Expect = 3e-14
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Frame = +2
Query: 194 FPXQNQXRHCYQSYVDFHRCQXVR---GXKYXPCYXFKRVYRSLCPNEWVDKWDNQRAEG 364
FP QNQ R+CYQ+++D+HRC R G PC + RVY SLCP WV+ W+ Q G
Sbjct: 23 FPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNG 82
Query: 365 TFAGRI 382
FAG+I
Sbjct: 83 IFAGKI 88
>AL031594-1|CAI21907.1| 108|Homo sapiens protein ( Human DNA
sequence from clone RP4-591N18 on chromosome
22q13.1-13.2.33 Contains the C22orf34 gene for
chromosome 22 open reading frame 34. ).
Length = 108
Score = 53.2 bits (122), Expect = 2e-06
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +2
Query: 194 FPXQNQXRHCYQSYVDFHRCQXVR----GXKYXPCYXFKRVYRSLCPNEWVDKWDNQRAE 361
FP QNQ R+ +Q Y+D H + G C ++ VY+SLCP W WD+ +
Sbjct: 21 FPNQNQTRNGWQKYLDLHHFKKAMTAKGGGDVSVCEWYQHVYKSLCPIPWASAWDDHGQK 80
Query: 362 GTFAGR 379
F GR
Sbjct: 81 AHFLGR 86
>AJ291390-1|CAC19572.1| 901|Homo sapiens MUC3B mucin protein.
Length = 901
Score = 34.3 bits (75), Expect = 0.92
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +3
Query: 240 TSTVAXKFAAXNTXHATXSSXCTGLSAPMSGSTSGTTSAPKAPS 371
TS F++ +T H+T SS T +++P + + +G TS P +PS
Sbjct: 13 TSHSTPSFSS-STIHSTVSSSTTAITSPFTTAETGVTSTPSSPS 55
>AK057427-1|BAB71481.1| 123|Homo sapiens protein ( Homo sapiens
cDNA FLJ32865 fis, clone TESTI2003649, weakly similar to
GLYCOPROTEIN X PRECURSOR. ).
Length = 123
Score = 31.5 bits (68), Expect = 6.5
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +3
Query: 219 TATKVTWTSTVAXK---FAAXNTXHATXSSXCTGLSAPMSGSTSGTTSAPKAPSP 374
TAT+ +WT+T A + A A+ S CT AP +G +GT+ + SP
Sbjct: 29 TATRTSWTTTAASRPGPAAGRARSPASTISACTTRCAPSAGWRAGTSRSRTGFSP 83
>BC030645-1|AAH30645.1| 364|Homo sapiens platelet derived growth
factor D protein.
Length = 364
Score = 31.1 bits (67), Expect = 8.6
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +2
Query: 113 RLNHHQQSACVCSNRPP 163
+L+HH++ C+CS+RPP
Sbjct: 347 QLDHHERCDCICSSRPP 363
>AY359116-1|AAQ89474.1| 364|Homo sapiens SCDGF-B protein.
Length = 364
Score = 31.1 bits (67), Expect = 8.6
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +2
Query: 113 RLNHHQQSACVCSNRPP 163
+L+HH++ C+CS+RPP
Sbjct: 347 QLDHHERCDCICSSRPP 363
>AY027518-1|AAK20082.1| 364|Homo sapiens iris-expressed growth
factor short form protein.
Length = 364
Score = 31.1 bits (67), Expect = 8.6
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +2
Query: 113 RLNHHQQSACVCSNRPP 163
+L+HH++ C+CS+RPP
Sbjct: 347 QLDHHERCDCICSSRPP 363
>AY027517-1|AAK20081.1| 370|Homo sapiens iris-expressed growth
factor long form protein.
Length = 370
Score = 31.1 bits (67), Expect = 8.6
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +2
Query: 113 RLNHHQQSACVCSNRPP 163
+L+HH++ C+CS+RPP
Sbjct: 353 QLDHHERCDCICSSRPP 369
>AK127688-1|BAC87085.1| 129|Homo sapiens protein ( Homo sapiens
cDNA FLJ45786 fis, clone NETRP2008488. ).
Length = 129
Score = 31.1 bits (67), Expect = 8.6
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -3
Query: 407 KHRERLG-SKSYRRRCLRRAGCPTCRPTHWGRET 309
K R++ G K RR+ LR+A CP+ RP G +T
Sbjct: 58 KGRQKAGLEKGNRRKELRQANCPSLRPQRKGADT 91
>AF336376-1|AAK56136.1| 370|Homo sapiens platelet-derived growth
factor D protein.
Length = 370
Score = 31.1 bits (67), Expect = 8.6
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +2
Query: 113 RLNHHQQSACVCSNRPP 163
+L+HH++ C+CS+RPP
Sbjct: 353 QLDHHERCDCICSSRPP 369
>AF335584-1|AAK38840.1| 370|Homo sapiens platelet-derived growth
factor D protein.
Length = 370
Score = 31.1 bits (67), Expect = 8.6
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +2
Query: 113 RLNHHQQSACVCSNRPP 163
+L+HH++ C+CS+RPP
Sbjct: 353 QLDHHERCDCICSSRPP 369
>AB033832-1|BAB18903.1| 370|Homo sapiens spinal cord-derived growth
factor-B protein.
Length = 370
Score = 31.1 bits (67), Expect = 8.6
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +2
Query: 113 RLNHHQQSACVCSNRPP 163
+L+HH++ C+CS+RPP
Sbjct: 353 QLDHHERCDCICSSRPP 369
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,339,780
Number of Sequences: 237096
Number of extensions: 1724268
Number of successful extensions: 4349
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 4187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4330
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17559747370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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