Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_J06
(1196 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical pr... 34 0.17
Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical pr... 33 0.30
AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp (s... 32 0.92
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 31 2.1
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 31 2.1
AJ133597-1|CAC35530.1| 684|Caenorhabditis elegans soluble guany... 30 2.8
Z77652-5|CAB01118.2| 646|Caenorhabditis elegans Hypothetical pr... 30 3.7
AY652942-1|AAT73709.1| 684|Caenorhabditis elegans guanylate cyc... 30 3.7
Z81484-8|CAE11295.1| 325|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 29 4.9
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 4.9
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr... 29 6.5
L16559-6|AAA27931.1| 397|Caenorhabditis elegans Hypothetical pr... 29 6.5
AY028167-1|AAK19023.1| 287|Caenorhabditis elegans EFL-2 protein. 29 6.5
AL117203-19|CAN86631.1| 358|Caenorhabditis elegans Hypothetical... 29 6.5
AL117203-18|CAN86630.1| 332|Caenorhabditis elegans Hypothetical... 29 6.5
AL117203-17|CAN86629.1| 284|Caenorhabditis elegans Hypothetical... 29 6.5
AL117203-16|CAB60421.1| 412|Caenorhabditis elegans Hypothetical... 29 6.5
AF067618-1|AAC19199.2| 1174|Caenorhabditis elegans Hypothetical ... 29 6.5
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 29 8.6
AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin... 29 8.6
>U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical
protein C10H11.8 protein.
Length = 382
Score = 34.3 bits (75), Expect = 0.17
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 97 EAMFSEDGKYYSTITKDGRLKIWDTETN 180
+A+FS +G+Y T D ++KIWD E N
Sbjct: 330 DAIFSSEGRYIFTGGNDNQVKIWDVENN 357
>Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical
protein F28C6.3 protein.
Length = 430
Score = 33.5 bits (73), Expect = 0.30
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 88 NMAEAMFSEDGKYYSTITKDGRLKIWDTETN 180
++ + +SE+ + Y T +KDG +KIWD +N
Sbjct: 261 SVTDVHYSENARLYVTASKDGHVKIWDGVSN 291
Score = 29.9 bits (64), Expect = 3.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 88 NMAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYT 201
++ A F+++GKY T D +K+W+ TN YT
Sbjct: 305 SICSAKFTKNGKYILTSGMDSIVKLWELSTNRCLIVYT 342
>AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 17 protein.
Length = 567
Score = 31.9 bits (69), Expect = 0.92
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 97 EAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEY 198
E F+ +G + + + D +K+WDTET +KQ +
Sbjct: 324 EVAFNNEGTEFLSASFDRYVKLWDTETGQVKQRF 357
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 31.1 bits (67), Expect = 1.6
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +1
Query: 106 FSEDGKYYSTITKDGRLKIWD 168
FSE+G Y +T ++DG +K+WD
Sbjct: 388 FSENGYYLATGSEDGEVKLWD 408
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 30.7 bits (66), Expect = 2.1
Identities = 14/58 (24%), Positives = 32/58 (55%)
Frame = +1
Query: 91 MAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLNITSYVPTVDNRQSIS 264
+++ + S DG++ + + D L++WD V +++ + ++ S + DNRQ +S
Sbjct: 72 VSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTK-DVLSVAFSADNRQIVS 128
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore complex
protein protein11 protein.
Length = 805
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 1002 SXPXSSDDIQLTPSPSLSTESIALGAS-SSTKLYMGVGWTGTAL 874
S P ++ P P+ +T ++ LG +ST L G GWT + L
Sbjct: 525 SLPTTTSTTSTLPKPAEATPTLGLGLGLTSTPLAKGTGWTTSGL 568
>AJ133597-1|CAC35530.1| 684|Caenorhabditis elegans soluble
guanylate cyclase protein.
Length = 684
Score = 30.3 bits (65), Expect = 2.8
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 620 YLVTASYQLSLWRL--HNKDVTLIKSLGYSTSQTAILSLVSFNDA 748
Y +T S + S+W + H++D+ + GY +TAI + V+ A
Sbjct: 625 YFLTRSLKKSIWEIIDHDRDINVSSIEGYEELETAIENAVTIKSA 669
>Z77652-5|CAB01118.2| 646|Caenorhabditis elegans Hypothetical
protein C06B3.8 protein.
Length = 646
Score = 29.9 bits (64), Expect = 3.7
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 620 YLVTASYQLSLWRL--HNKDVTLIKSLGYSTSQTAILSLVSFNDA 748
Y +T S + S+W + H++D+ + GY +TAI + V+ A
Sbjct: 587 YFLTRSLKKSIWEIIDHDRDINVNSIEGYEELETAIENAVTIKSA 631
>AY652942-1|AAT73709.1| 684|Caenorhabditis elegans guanylate
cyclase-like protein protein.
Length = 684
Score = 29.9 bits (64), Expect = 3.7
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 620 YLVTASYQLSLWRL--HNKDVTLIKSLGYSTSQTAILSLVSFNDA 748
Y +T S + S+W + H++D+ + GY +TAI + V+ A
Sbjct: 625 YFLTRSLKKSIWEIIDHDRDINVNSIEGYEELETAIENAVTIKSA 669
>Z81484-8|CAE11295.1| 325|Caenorhabditis elegans Hypothetical
protein C47A10.9 protein.
Length = 325
Score = 29.5 bits (63), Expect = 4.9
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 626 VTASYQLSLWRLHNKDVTLIKSLGYSTSQTAILSLV-SFNDAYYIV 760
V A + L LW D ++ LG++T+ +S++ +F + YYI+
Sbjct: 72 VLAGFPLGLWSWLEVDTGIVMFLGFTTAFLMPISVIKTFENRYYIL 117
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 29.5 bits (63), Expect = 4.9
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 88 NMAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLNITSYVPTVDNRQSIS 264
+++ A FS GKY T + D +KIW+ + + ++ T L + + D+R +S
Sbjct: 89 SISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLT-GHKLGVNDIAWSSDSRCVVS 146
Score = 29.1 bits (62), Expect = 6.5
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 91 MAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYT 201
+A FS +GKY D LK+WD ++YT
Sbjct: 259 VAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYT 295
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 29.5 bits (63), Expect = 4.9
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -3
Query: 1002 SXPXSSDDIQLTPSPSLSTESIALGASSST 913
S P S I +TPSPS STES SS+
Sbjct: 1967 SSPRSLSQITITPSPSQSTESTQTSLPSSS 1996
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 29.5 bits (63), Expect = 4.9
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +1
Query: 100 AMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPXSSLNITSYVPTVDNRQSISFKL 273
A +S DG +T +DG++KIW++ ++ + +S +T+ T R +S L
Sbjct: 366 AEYSPDGSLMATGAEDGKVKIWNSRSSFCTVTFDEHTS-GVTAVKWTQSGRAILSASL 422
>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical protein
ZK287.4 protein.
Length = 1208
Score = 29.1 bits (62), Expect = 6.5
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 858 VTRESTVR-CRSNPPPCTASCSRTHRE-QLTQYSEKVMGSTEYRRC 989
+TR ++ C+S PP ++ CS+ Q QY + S EYR+C
Sbjct: 957 LTRNDCMKTCQSPMPPPSSQCSQPAASGQGDQYLSRYFFSPEYRQC 1002
>L16559-6|AAA27931.1| 397|Caenorhabditis elegans Hypothetical
protein C06E1.8 protein.
Length = 397
Score = 29.1 bits (62), Expect = 6.5
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 485 RVYEWNIEDGSVKQTYNISIENNTKQGSNINAIKIIPHNQHKKSRYLVTASYQL 646
R W D S+ + + NN +N N +IPH +S +L+T +QL
Sbjct: 110 RCCNWAFPDKSLLHIHLQTATNNNDSNNNNN--SVIPHGVINRSCHLITDPFQL 161
>AY028167-1|AAK19023.1| 287|Caenorhabditis elegans EFL-2 protein.
Length = 287
Score = 29.1 bits (62), Expect = 6.5
Identities = 31/121 (25%), Positives = 52/121 (42%)
Frame = +2
Query: 545 ENNTKQGSNINAIKIIPHNQHKKSRYLVTASYQLSLWRLHNKDVTLIKSLGYSTSQTAIL 724
+NN + N ++ Q +K L+ Q ++ LH +D + + Y S+ I
Sbjct: 103 DNNNSEEQNALEARVEMLRQQEKLLELMIRDAQ-AIIELHFED-PIERPYNY-VSKEDIR 159
Query: 725 SLVSFNDAYYIVEGSENERLLSFWDVTVTDESTQNNNDEPTPNKRHKRKHSAVPVQPTPM 904
N IV+ SE + SF ++ VTD ST ++D NK + H+ + P
Sbjct: 160 KTAEPNTKSIIVK-SELDTSSSF-EIQVTDPSTSGSHDMIVRNKNGVKSHALLFTNDPPE 217
Query: 905 Y 907
Y
Sbjct: 218 Y 218
>AL117203-19|CAN86631.1| 358|Caenorhabditis elegans Hypothetical
protein Y48C3A.17d protein.
Length = 358
Score = 29.1 bits (62), Expect = 6.5
Identities = 31/121 (25%), Positives = 52/121 (42%)
Frame = +2
Query: 545 ENNTKQGSNINAIKIIPHNQHKKSRYLVTASYQLSLWRLHNKDVTLIKSLGYSTSQTAIL 724
+NN + N ++ Q +K L+ Q ++ LH +D + + Y S+ I
Sbjct: 100 DNNNSEEQNALEARVEMLRQQEKLLELMIRDAQ-AIIELHFED-PIERPYNY-VSKEDIR 156
Query: 725 SLVSFNDAYYIVEGSENERLLSFWDVTVTDESTQNNNDEPTPNKRHKRKHSAVPVQPTPM 904
N IV+ SE + SF ++ VTD ST ++D NK + H+ + P
Sbjct: 157 KTAEPNTKSIIVK-SELDTSSSF-EIQVTDPSTSGSHDMIVRNKNGVKSHALLFTNDPPE 214
Query: 905 Y 907
Y
Sbjct: 215 Y 215
>AL117203-18|CAN86630.1| 332|Caenorhabditis elegans Hypothetical
protein Y48C3A.17c protein.
Length = 332
Score = 29.1 bits (62), Expect = 6.5
Identities = 31/121 (25%), Positives = 52/121 (42%)
Frame = +2
Query: 545 ENNTKQGSNINAIKIIPHNQHKKSRYLVTASYQLSLWRLHNKDVTLIKSLGYSTSQTAIL 724
+NN + N ++ Q +K L+ Q ++ LH +D + + Y S+ I
Sbjct: 100 DNNNSEEQNALEARVEMLRQQEKLLELMIRDAQ-AIIELHFED-PIERPYNY-VSKEDIR 156
Query: 725 SLVSFNDAYYIVEGSENERLLSFWDVTVTDESTQNNNDEPTPNKRHKRKHSAVPVQPTPM 904
N IV+ SE + SF ++ VTD ST ++D NK + H+ + P
Sbjct: 157 KTAEPNTKSIIVK-SELDTSSSF-EIQVTDPSTSGSHDMIVRNKNGVKSHALLFTNDPPE 214
Query: 905 Y 907
Y
Sbjct: 215 Y 215
>AL117203-17|CAN86629.1| 284|Caenorhabditis elegans Hypothetical
protein Y48C3A.17b protein.
Length = 284
Score = 29.1 bits (62), Expect = 6.5
Identities = 31/121 (25%), Positives = 52/121 (42%)
Frame = +2
Query: 545 ENNTKQGSNINAIKIIPHNQHKKSRYLVTASYQLSLWRLHNKDVTLIKSLGYSTSQTAIL 724
+NN + N ++ Q +K L+ Q ++ LH +D + + Y S+ I
Sbjct: 100 DNNNSEEQNALEARVEMLRQQEKLLELMIRDAQ-AIIELHFED-PIERPYNY-VSKEDIR 156
Query: 725 SLVSFNDAYYIVEGSENERLLSFWDVTVTDESTQNNNDEPTPNKRHKRKHSAVPVQPTPM 904
N IV+ SE + SF ++ VTD ST ++D NK + H+ + P
Sbjct: 157 KTAEPNTKSIIVK-SELDTSSSF-EIQVTDPSTSGSHDMIVRNKNGVKSHALLFTNDPPE 214
Query: 905 Y 907
Y
Sbjct: 215 Y 215
>AL117203-16|CAB60421.1| 412|Caenorhabditis elegans Hypothetical
protein Y48C3A.17a protein.
Length = 412
Score = 29.1 bits (62), Expect = 6.5
Identities = 31/121 (25%), Positives = 52/121 (42%)
Frame = +2
Query: 545 ENNTKQGSNINAIKIIPHNQHKKSRYLVTASYQLSLWRLHNKDVTLIKSLGYSTSQTAIL 724
+NN + N ++ Q +K L+ Q ++ LH +D + + Y S+ I
Sbjct: 100 DNNNSEEQNALEARVEMLRQQEKLLELMIRDAQ-AIIELHFED-PIERPYNY-VSKEDIR 156
Query: 725 SLVSFNDAYYIVEGSENERLLSFWDVTVTDESTQNNNDEPTPNKRHKRKHSAVPVQPTPM 904
N IV+ SE + SF ++ VTD ST ++D NK + H+ + P
Sbjct: 157 KTAEPNTKSIIVK-SELDTSSSF-EIQVTDPSTSGSHDMIVRNKNGVKSHALLFTNDPPE 214
Query: 905 Y 907
Y
Sbjct: 215 Y 215
>AF067618-1|AAC19199.2| 1174|Caenorhabditis elegans Hypothetical
protein F56H1.3 protein.
Length = 1174
Score = 29.1 bits (62), Expect = 6.5
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 635 SYQLSLWRLHNKDVTLIKSLGYSTSQTAILSLVSFNDAYYIV 760
S QL WR HN D +K +G S S + +L S ND Y++
Sbjct: 604 SNQLECWRTHNFDPIKLK-IGASFS-SVLLKFPSENDMKYVI 643
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 28.7 bits (61), Expect = 8.6
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +2
Query: 347 NGKLLIYSISQAKIINVWVPAKHFSAKVTALDWSRKYGLYSCTKDSRVYEWNIEDG 514
+G + I+ Q ++ + H +A VT L W + +YS ++D V W +DG
Sbjct: 216 DGNIFIWDTVQGTVVRCL--SGH-TASVTCLRWGGEGLIYSGSQDRTVKMWRADDG 268
>AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin
related protein 2 protein.
Length = 1335
Score = 28.7 bits (61), Expect = 8.6
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 91 MAEAMFSEDGKYYSTI-TKDGRLKIWDTETNVL 186
+A FSEDGKY +T +DG++ + T + L
Sbjct: 1248 IAAVAFSEDGKYLATYGAEDGKINFFQTSQSFL 1280
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,142,179
Number of Sequences: 27780
Number of extensions: 511834
Number of successful extensions: 1659
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1658
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3286854270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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