Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_J06
         (1196 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    26   0.57 
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      24   2.3  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    24   3.0  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   7.0  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   7.0  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   7.0  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   9.3  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 26.2 bits (55), Expect = 0.57
 Identities = 21/102 (20%), Positives = 46/102 (45%)
 Frame = +2

Query: 521 KQTYNISIENNTKQGSNINAIKIIPHNQHKKSRYLVTASYQLSLWRLHNKDVTLIKSLGY 700
           K    +  E   ++  +++ +KI+ +++    +  +    + S ++ + ++V L    GY
Sbjct: 113 KSNVCLKFEEQKRRKKSLDDVKILRNDRIDSYKSNLKCD-KCSTYQSNGEEVCLENCTGY 171

Query: 701 STSQTAILSLVSFNDAYYIVEGSENERLLSFWDVTVTDESTQ 826
                 +L +   N  +   EGS  + L S WD   TD+S +
Sbjct: 172 Q-QYLRLLEVPQINLEWG--EGSSGDDLSSEWDSDYTDKSNE 210


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 116 TGNTIRQLLKMADLRYGIRRPTYSNRNTHLXLHLTSPP 229
           T  T++QLL+ A +R   RR    +  T     + SPP
Sbjct: 163 TPTTVQQLLRRAQIRRNERRTPDPHDETAKKPRVLSPP 200


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 182 YSNRNTHLXLHLTSPPTCLQWTTVSQSV 265
           Y ++ +H  LH+ S P+ +Q     QSV
Sbjct: 804 YGHQQSHHGLHINSSPSSVQSGQQQQSV 831


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 15/56 (26%), Positives = 24/56 (42%)
 Frame = +2

Query: 326 CIVLGTTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWSRKYGLYSCTKDSRVY 493
           C+ +  +    L+   S    I ++ P K+   KVT  D S+K G  + T     Y
Sbjct: 741 CVAISLSATVTLVCLYSPKIYIILFQPDKNIRRKVTMGDKSKKQGSSAGTSSITKY 796


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 9/29 (31%), Positives = 15/29 (51%), Gaps = 4/29 (13%)
 Frame = -1

Query: 887 PAPHCAFSCDVC----LVSAHRCCFECFH 813
           P   C+  C+V      V+  +CC+ CF+
Sbjct: 583 PESVCSLPCEVGQAKKYVAGEQCCWHCFN 611


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 15/56 (26%), Positives = 24/56 (42%)
 Frame = +2

Query: 326 CIVLGTTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWSRKYGLYSCTKDSRVY 493
           C+ +  +    L+   S    I ++ P K+   KVT  D S+K G  + T     Y
Sbjct: 831 CVAISLSATVTLVCLYSPKIYIILFQPDKNIRRKVTMGDKSKKQGSSAGTSSITKY 886


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 9.3
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +3

Query: 402 CPPNILALK*PPWIGVENTVYTAVLRTV 485
           C P + A     W+G  N+    V+ TV
Sbjct: 652 CQPGVTAFIVTSWLGYMNSFVNPVIYTV 679


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 294,687
Number of Sequences: 438
Number of extensions: 6578
Number of successful extensions: 20
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 40849839
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)