Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_J04
         (1215 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   0.80 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    27   0.84 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   1.1  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect(2) = 0.80
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -1

Query: 582 PPPPPPXP 559
           PPPPPP P
Sbjct: 784 PPPPPPPP 791



 Score = 22.2 bits (45), Expect(2) = 0.80
 Identities = 8/22 (36%), Positives = 9/22 (40%)
 Frame = -1

Query: 630 PTPXXXXXXXXFXPXKPPPPPP 565
           P+P             PPPPPP
Sbjct: 769 PSPSRSAFADGIGSPPPPPPPP 790


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 27.5 bits (58), Expect = 0.84
 Identities = 23/75 (30%), Positives = 25/75 (33%), Gaps = 5/75 (6%)
 Frame = +2

Query: 629 GXWGXXXXPXXXXRGPXXXGXGKGXXXXXG-----GXXGXPXXRGXPXXKXXNQRAXKGP 793
           G  G    P    RGP       G     G     G  G P   G P  +   QR   GP
Sbjct: 568 GEKGEPGLPVWKDRGPSGPSGPLGPQGEKGDRGDSGLMGRPGNDGLPGPQ--GQRGLPGP 625

Query: 794 EXEKGXXGXXFPKGP 838
           + EKG  G     GP
Sbjct: 626 QGEKGDQGPPGFIGP 640


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.1 bits (57), Expect = 1.1
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = -3

Query: 1078 PPPXGXXPXPXXGXPPXXXXXXXPPXP 998
            PPP G  P P  G P        PP P
Sbjct: 588  PPPMGPPPSPLAGGPLGGPAGSRPPLP 614


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 583,901
Number of Sequences: 2352
Number of extensions: 8158
Number of successful extensions: 124
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 95
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 138156486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)