Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_J04
(1215 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 0.40
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.41
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.41
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 33 0.54
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.94
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.94
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.94
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.94
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.94
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.94
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 1.2
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 31 2.2
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 27 3.2
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 25 3.4
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 5.0
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 5.0
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 29 6.6
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 8.8
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 8.8
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 23 9.0
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 23 9.1
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 23 9.7
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 23 9.8
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 24 9.9
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect(2) = 0.40
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = -1
Query: 720 PPXXXXXPXPXPXXXGPRXXXXGNXXXPXXPTPXXXXXXXXFXPXKPPPPP 568
PP P P P G N P P P P PPPPP
Sbjct: 535 PPPVSSIPPPPPIA-GLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPP 584
Score = 23.4 bits (48), Expect(2) = 0.40
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 582 PPPPPPXP 559
PPPPPP P
Sbjct: 589 PPPPPPPP 596
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.1 bits (72), Expect = 0.41
Identities = 29/124 (23%), Positives = 30/124 (24%), Gaps = 7/124 (5%)
Frame = -1
Query: 729 PXFPPXXXXXPXPXPXXXG----PRXXXXGNXXXPXXPTPXXXXXXXXFXPXKPPPPPP- 565
P PP P P P G P P P P P PPPPPP
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 323
Query: 564 --XPXXXXXSXXXXLXXFXXXXXXPXXPXPXXFSXXNXFXPXXXXXVXPXXPXXXXXLXP 391
P P P P S P P P + P
Sbjct: 324 RFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 383
Query: 390 XXPP 379
PP
Sbjct: 384 PPPP 387
Score = 32.3 bits (70), Expect = 0.71
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = -1
Query: 753 GXPRXXGKPXFPPXXXXXPXPXPXXXGPRXXXXGNXXXPXXPTPXXXXXXXXFXPXKPPP 574
G P G P PP P P PR G P P P PPP
Sbjct: 326 GPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYP-PPPPSRPPAPPSGHGMIPPP 384
Query: 573 PPP 565
PPP
Sbjct: 385 PPP 387
Score = 31.1 bits (67), Expect = 1.6
Identities = 21/81 (25%), Positives = 21/81 (25%)
Frame = -3
Query: 1123 PXXXPXXXXXGXFXXPPPXGXXPXPXXGXPPXXXXXXXPPXPXGXXXXXXPXXAXXXXGX 944
P P G PPP P PP P P G P
Sbjct: 272 PMPPPMPPTPGMTPRPPPP---PSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP 328
Query: 943 XXGGXPGXXPGXFXXPXGFPP 881
GG P P P G PP
Sbjct: 329 GMGGMPPPPPPGMRYPGGMPP 349
Score = 30.3 bits (65), Expect = 2.9
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = -1
Query: 747 PRXXGKPXFPPXXXXXPXPXPXXXGPRXXXXGNXXXPXXPTPXXXXXXXXFXPXKPPPPP 568
P +P PP P P P G G P P P PPPPP
Sbjct: 281 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPG--MGGMPPPPP 338
Query: 567 P 565
P
Sbjct: 339 P 339
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.1 bits (72), Expect = 0.41
Identities = 29/124 (23%), Positives = 30/124 (24%), Gaps = 7/124 (5%)
Frame = -1
Query: 729 PXFPPXXXXXPXPXPXXXG----PRXXXXGNXXXPXXPTPXXXXXXXXFXPXKPPPPPP- 565
P PP P P P G P P P P P PPPPPP
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 333
Query: 564 --XPXXXXXSXXXXLXXFXXXXXXPXXPXPXXFSXXNXFXPXXXXXVXPXXPXXXXXLXP 391
P P P P S P P P + P
Sbjct: 334 RFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 393
Query: 390 XXPP 379
PP
Sbjct: 394 PPPP 397
Score = 32.3 bits (70), Expect = 0.71
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = -1
Query: 753 GXPRXXGKPXFPPXXXXXPXPXPXXXGPRXXXXGNXXXPXXPTPXXXXXXXXFXPXKPPP 574
G P G P PP P P PR G P P P PPP
Sbjct: 336 GPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYP-PPPPSRPPAPPSGHGMIPPP 394
Query: 573 PPP 565
PPP
Sbjct: 395 PPP 397
Score = 31.1 bits (67), Expect = 1.6
Identities = 21/81 (25%), Positives = 21/81 (25%)
Frame = -3
Query: 1123 PXXXPXXXXXGXFXXPPPXGXXPXPXXGXPPXXXXXXXPPXPXGXXXXXXPXXAXXXXGX 944
P P G PPP P PP P P G P
Sbjct: 282 PMPPPMPPTPGMTPRPPPP---PSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP 338
Query: 943 XXGGXPGXXPGXFXXPXGFPP 881
GG P P P G PP
Sbjct: 339 GMGGMPPPPPPGMRYPGGMPP 359
Score = 30.3 bits (65), Expect = 2.9
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = -1
Query: 747 PRXXGKPXFPPXXXXXPXPXPXXXGPRXXXXGNXXXPXXPTPXXXXXXXXFXPXKPPPPP 568
P +P PP P P P G G P P P PPPPP
Sbjct: 291 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPG--MGGMPPPPP 348
Query: 567 P 565
P
Sbjct: 349 P 349
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 32.7 bits (71), Expect = 0.54
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +2
Query: 560 GXGGGGGGFXGXXXXXXXXXXGVGXWGXXXXPXXXXRGPXXXGXGKGXXXXXGGXXG 730
G GGGG G+ G G G WG G G G G GG G
Sbjct: 56 GRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRG 112
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.94
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 1092 GXXXPPPXXGXXPXPXXXXXPXGXXXXPPPXP 997
G PPP G P P P G PPP P
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 29.9 bits (64), Expect = 3.8
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = -1
Query: 753 GXPRXXGKPXFPPXXXXXPXPXPXXXGPRXXXXGNXXXPXXPTPXXXXXXXXFXPXKPPP 574
G P G P PP P P GP P P P PPP
Sbjct: 718 GLPPITGGPPPPPPPGGLP---PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Query: 573 PPP 565
PPP
Sbjct: 775 PPP 777
Score = 29.5 bits (63), Expect = 5.0
Identities = 21/68 (30%), Positives = 21/68 (30%), Gaps = 3/68 (4%)
Frame = -3
Query: 1075 PPXGXXPXPXXGXPPXXXXXXXPPXPXGXXXXXXPXXAXXXXGXXXGGXP---GXXPGXF 905
PP P P G PP PP P G P GG P G P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGG----LPPITGGPPPPPPPGGLPPISGGPPPPP 762
Query: 904 XXPXGFPP 881
P G PP
Sbjct: 763 PPPGGCPP 770
Score = 29.1 bits (62), Expect = 6.6
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = -1
Query: 753 GXPRXXGKPXFPPXXXXXPXPXPXXXGPRXXXXGNXXXPXXPTPXXXXXXXXFXPXKPPP 574
G P G P PP P P P G P P P F PPP
Sbjct: 734 GLPPITGGPPPPPPPGGLP-PISGGPPPPPPPPGGCPPPPPPPPPGG-----FKGGPPPP 787
Query: 573 PPP 565
PPP
Sbjct: 788 PPP 790
Score = 29.1 bits (62), Expect = 6.6
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -3
Query: 1078 PPPXGXXPXPXXGXPPXXXXXXXPPXPXGXXXXXXPXXAXXXXGXXXGGXPGXXPGXF 905
PPP P P G PP PP P G P G G P PG F
Sbjct: 742 PPP----PPPPGGLPPISGGPPPPPPPPG--GCPPPPPPPPPGGFKGGPPPPPPPGMF 793
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.94
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 1092 GXXXPPPXXGXXPXPXXXXXPXGXXXXPPPXP 997
G PPP G P P P G PPP P
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 29.9 bits (64), Expect = 3.8
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = -1
Query: 753 GXPRXXGKPXFPPXXXXXPXPXPXXXGPRXXXXGNXXXPXXPTPXXXXXXXXFXPXKPPP 574
G P G P PP P P GP P P P PPP
Sbjct: 718 GLPPITGGPPPPPPPGGLP---PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Query: 573 PPP 565
PPP
Sbjct: 775 PPP 777
Score = 29.5 bits (63), Expect = 5.0
Identities = 21/68 (30%), Positives = 21/68 (30%), Gaps = 3/68 (4%)
Frame = -3
Query: 1075 PPXGXXPXPXXGXPPXXXXXXXPPXPXGXXXXXXPXXAXXXXGXXXGGXP---GXXPGXF 905
PP P P G PP PP P G P GG P G P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGG----LPPITGGPPPPPPPGGLPPISGGPPPPP 762
Query: 904 XXPXGFPP 881
P G PP
Sbjct: 763 PPPGGCPP 770
Score = 29.1 bits (62), Expect = 6.6
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = -1
Query: 753 GXPRXXGKPXFPPXXXXXPXPXPXXXGPRXXXXGNXXXPXXPTPXXXXXXXXFXPXKPPP 574
G P G P PP P P P G P P P F PPP
Sbjct: 734 GLPPITGGPPPPPPPGGLP-PISGGPPPPPPPPGGCPPPPPPPPPGG-----FKGGPPPP 787
Query: 573 PPP 565
PPP
Sbjct: 788 PPP 790
Score = 29.1 bits (62), Expect = 6.6
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -3
Query: 1078 PPPXGXXPXPXXGXPPXXXXXXXPPXPXGXXXXXXPXXAXXXXGXXXGGXPGXXPGXF 905
PPP P P G PP PP P G P G G P PG F
Sbjct: 742 PPP----PPPPGGLPPISGGPPPPPPPPG--GCPPPPPPPPPGGFKGGPPPPPPPGMF 793
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.94
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 1092 GXXXPPPXXGXXPXPXXXXXPXGXXXXPPPXP 997
G PPP G P P P G PPP P
Sbjct: 340 GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 29.9 bits (64), Expect = 3.8
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = -1
Query: 753 GXPRXXGKPXFPPXXXXXPXPXPXXXGPRXXXXGNXXXPXXPTPXXXXXXXXFXPXKPPP 574
G P G P PP P P GP P P P PPP
Sbjct: 301 GLPPITGGPPPPPPPGGLP---PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
Query: 573 PPP 565
PPP
Sbjct: 358 PPP 360
Score = 29.5 bits (63), Expect = 5.0
Identities = 21/68 (30%), Positives = 21/68 (30%), Gaps = 3/68 (4%)
Frame = -3
Query: 1075 PPXGXXPXPXXGXPPXXXXXXXPPXPXGXXXXXXPXXAXXXXGXXXGGXP---GXXPGXF 905
PP P P G PP PP P G P GG P G P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGG----LPPITGGPPPPPPPGGLPPISGGPPPPP 345
Query: 904 XXPXGFPP 881
P G PP
Sbjct: 346 PPPGGCPP 353
Score = 29.1 bits (62), Expect = 6.6
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = -1
Query: 753 GXPRXXGKPXFPPXXXXXPXPXPXXXGPRXXXXGNXXXPXXPTPXXXXXXXXFXPXKPPP 574
G P G P PP P P P G P P P F PPP
Sbjct: 317 GLPPITGGPPPPPPPGGLP-PISGGPPPPPPPPGGCPPPPPPPPPGG-----FKGGPPPP 370
Query: 573 PPP 565
PPP
Sbjct: 371 PPP 373
Score = 29.1 bits (62), Expect = 6.6
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -3
Query: 1078 PPPXGXXPXPXXGXPPXXXXXXXPPXPXGXXXXXXPXXAXXXXGXXXGGXPGXXPGXF 905
PPP P P G PP PP P G P G G P PG F
Sbjct: 325 PPP----PPPPGGLPPISGGPPPPPPPPG--GCPPPPPPPPPGGFKGGPPPPPPPGMF 376
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.94
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -3
Query: 1123 PXXXPXXXXXGXFXXPPPXGXXPXPXXGXPPXXXXXXXPPXPXG 992
P P G PP G P P G PP PP P G
Sbjct: 243 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 286
Score = 29.1 bits (62), Expect = 6.6
Identities = 16/60 (26%), Positives = 17/60 (28%)
Frame = -1
Query: 747 PRXXGKPXFPPXXXXXPXPXPXXXGPRXXXXGNXXXPXXPTPXXXXXXXXFXPXKPPPPP 568
P G P PP P P P G+ P P PPPPP
Sbjct: 274 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.94
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -3
Query: 1123 PXXXPXXXXXGXFXXPPPXGXXPXPXXGXPPXXXXXXXPPXPXG 992
P P G PP G P P G PP PP P G
Sbjct: 264 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 307
Score = 29.1 bits (62), Expect = 6.6
Identities = 16/60 (26%), Positives = 17/60 (28%)
Frame = -1
Query: 747 PRXXGKPXFPPXXXXXPXPXPXXXGPRXXXXGNXXXPXXPTPXXXXXXXXFXPXKPPPPP 568
P G P PP P P P G+ P P PPPPP
Sbjct: 295 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.94
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -3
Query: 1123 PXXXPXXXXXGXFXXPPPXGXXPXPXXGXPPXXXXXXXPPXPXG 992
P P G PP G P P G PP PP P G
Sbjct: 249 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 292
Score = 29.1 bits (62), Expect = 6.6
Identities = 16/60 (26%), Positives = 17/60 (28%)
Frame = -1
Query: 747 PRXXGKPXFPPXXXXXPXPXPXXXGPRXXXXGNXXXPXXPTPXXXXXXXXFXPXKPPPPP 568
P G P PP P P P G+ P P PPPPP
Sbjct: 280 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -3
Query: 1111 PXXXXXGXFXXPPPXGXXPXPXXGXPPXXXXXXXPPXP 998
P G PPP G P P G PP PP P
Sbjct: 708 PPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPP 745
Score = 30.7 bits (66), Expect = 2.2
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = -1
Query: 1143 GXXXXFXXXXPPXXXXXGXXXPPPXXGXXPXPXXXXXPXGXXXXPPPXP 997
G F PP G PP G P P P G PP P
Sbjct: 697 GVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPP 745
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 30.7 bits (66), Expect = 2.2
Identities = 20/63 (31%), Positives = 21/63 (33%)
Frame = -1
Query: 747 PRXXGKPXFPPXXXXXPXPXPXXXGPRXXXXGNXXXPXXPTPXXXXXXXXFXPXKPPPPP 568
P KP PP P P P P+ P P P P PPPPP
Sbjct: 466 PPTTPKPA-PPPPSRIPNPSP---SPQPAEVSKSPPPPPPLPPIATPSSV-PPPPPPPPP 520
Query: 567 PXP 559
P P
Sbjct: 521 PPP 523
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.3 bits (65), Expect = 2.9
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = +2
Query: 548 FXXXGXGGGGGGFXGXXXXXXXXXXGVGXWGXXXXPXXXXRGPXXXGXGKGXXXXXGGXX 727
F G GGGGGG G G G G P G G G GG
Sbjct: 20 FPSGGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGC 79
Query: 728 G 730
G
Sbjct: 80 G 80
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 26.6 bits (56), Expect(2) = 3.2
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = -1
Query: 582 PPPPPPXPXXXXXSXXXXLXXFXXXXXXPXXPXPXXF 472
PPPPPP P L P P P F
Sbjct: 551 PPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPPPPSF 587
Score = 21.8 bits (44), Expect(2) = 3.2
Identities = 9/28 (32%), Positives = 9/28 (32%)
Frame = -1
Query: 651 NXXXPXXPTPXXXXXXXXFXPXKPPPPP 568
N P P P PPPPP
Sbjct: 497 NGHAPNPPPPPPLLGIAPMSTNAPPPPP 524
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 25.4 bits (53), Expect(2) = 3.4
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1
Query: 585 KPPPPPPXP 559
KPPPPPP P
Sbjct: 307 KPPPPPPPP 315
Score = 23.0 bits (47), Expect(2) = 3.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 591 PXKPPPPPP 565
P PPPPPP
Sbjct: 306 PKPPPPPPP 314
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 5.0
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = -1
Query: 699 PXPXPXXXGPRXXXXGNXXXPXXPTPXXXXXXXXFXPXKPPPPPP 565
P P P G P P P P PPPPPP
Sbjct: 613 PPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 657
Score = 29.1 bits (62), Expect = 6.6
Identities = 16/59 (27%), Positives = 17/59 (28%)
Frame = -1
Query: 735 GKPXFPPXXXXXPXPXPXXXGPRXXXXGNXXXPXXPTPXXXXXXXXFXPXKPPPPPPXP 559
G P P P P P + P P P PPPPPP P
Sbjct: 599 GTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 5.0
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = -1
Query: 699 PXPXPXXXGPRXXXXGNXXXPXXPTPXXXXXXXXFXPXKPPPPPP 565
P P P G P P P P PPPPPP
Sbjct: 439 PPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 483
Score = 29.1 bits (62), Expect = 6.6
Identities = 16/59 (27%), Positives = 17/59 (28%)
Frame = -1
Query: 735 GKPXFPPXXXXXPXPXPXXXGPRXXXXGNXXXPXXPTPXXXXXXXXFXPXKPPPPPPXP 559
G P P P P P + P P P PPPPPP P
Sbjct: 425 GTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 483
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 29.1 bits (62), Expect = 6.6
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +2
Query: 560 GXGGGGGGFXGXXXXXXXXXXGVGXWGXXXXPXXXXRGPXXXGXGKGXXXXXGGXXG 730
G GGGGGGF G G G G G G G GG G
Sbjct: 58 GGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGGGNQG 114
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.7 bits (61), Expect = 8.8
Identities = 16/61 (26%), Positives = 17/61 (27%)
Frame = -3
Query: 1093 GXFXXPPPXGXXPXPXXGXPPXXXXXXXPPXPXGXXXXXXPXXAXXXXGXXXGGXPGXXP 914
G + PPP G G P PP P G P G G G
Sbjct: 407 GGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPG 466
Query: 913 G 911
G
Sbjct: 467 G 467
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.7 bits (61), Expect = 8.8
Identities = 19/64 (29%), Positives = 20/64 (31%), Gaps = 1/64 (1%)
Frame = +2
Query: 560 GXGGGGGGFXGXXXXXXXXXXGVGXWGXXXXPXXXXRG-PXXXGXGKGXXXXXGGXXGXP 736
G GGGG G G G G WG G G G+G G G P
Sbjct: 90 GNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPP 149
Query: 737 XXRG 748
G
Sbjct: 150 GSNG 153
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 23.4 bits (48), Expect(2) = 9.0
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = -1
Query: 627 TPXXXXXXXXFXPXKPPPPPP 565
TP P PPPPPP
Sbjct: 753 TPQPIQQQQSSIPPPPPPPPP 773
Score = 23.4 bits (48), Expect(2) = 9.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 582 PPPPPPXP 559
PPPPPP P
Sbjct: 794 PPPPPPLP 801
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 23.4 bits (48), Expect(2) = 9.1
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = -1
Query: 627 TPXXXXXXXXFXPXKPPPPPP 565
TP P PPPPPP
Sbjct: 753 TPQPIQQQQSSIPPPPPPPPP 773
Score = 23.4 bits (48), Expect(2) = 9.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 582 PPPPPPXP 559
PPPPPP P
Sbjct: 794 PPPPPPLP 801
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 23.4 bits (48), Expect(2) = 9.7
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -1
Query: 630 PTPXXXXXXXXFXPXKPPPPPP 565
P P P PPPPPP
Sbjct: 234 PPPPPLPPVGAGAPPPPPPPPP 255
Score = 23.4 bits (48), Expect(2) = 9.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 582 PPPPPPXP 559
PPPPPP P
Sbjct: 249 PPPPPPPP 256
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 23.4 bits (48), Expect(2) = 9.8
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -1
Query: 630 PTPXXXXXXXXFXPXKPPPPPP 565
P P P PPPPPP
Sbjct: 220 PPPPPLPPVGAGAPPPPPPPPP 241
Score = 23.4 bits (48), Expect(2) = 9.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 582 PPPPPPXP 559
PPPPPP P
Sbjct: 235 PPPPPPPP 242
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 23.8 bits (49), Expect(2) = 9.9
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 585 KPPPPPPXP 559
+PPPPPP P
Sbjct: 25 QPPPPPPPP 33
Score = 23.0 bits (47), Expect(2) = 9.9
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 591 PXKPPPPPP 565
P PPPPPP
Sbjct: 24 PQPPPPPPP 32
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,191,543
Number of Sequences: 27780
Number of extensions: 250524
Number of successful extensions: 2361
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1749
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3349461018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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