Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_I24
         (1217 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0790 - 21214282-21214369,21214455-21214564,21215478-212155...   125   6e-29
08_01_0372 + 3286861-3286939,3287220-3287299,3289041-3289150,328...   125   6e-29
09_04_0106 - 14636773-14636863,14636948-14637057,14638107-146381...   124   1e-28

>08_02_0790 -
           21214282-21214369,21214455-21214564,21215478-21215557,
           21215659-21215737
          Length = 118

 Score =  125 bits (302), Expect = 6e-29
 Identities = 63/104 (60%), Positives = 76/104 (73%), Gaps = 2/104 (1%)
 Frame = +2

Query: 80  MVQRLTFRRRLSYNTKSNQRXIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 259
           MVQRLT+R+R SY TKSNQ  +V+TPGGRLVYQY KK    P+C     K++GI   RPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 60

Query: 260 E--RSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVK 385
           E  RSRL   ++TV R YGGVL    V++RI+RAFL+EEQKIVK
Sbjct: 61  EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEEQKIVK 104


>08_01_0372 +
           3286861-3286939,3287220-3287299,3289041-3289150,
           3289224-3289311
          Length = 118

 Score =  125 bits (302), Expect = 6e-29
 Identities = 63/104 (60%), Positives = 76/104 (73%), Gaps = 2/104 (1%)
 Frame = +2

Query: 80  MVQRLTFRRRLSYNTKSNQRXIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 259
           MVQRLT+R+R SY TKSNQ  +V+TPGGRLVYQY KK    P+C     K++GI   RPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 60

Query: 260 E--RSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVK 385
           E  RSRL   ++TV R YGGVL    V++RI+RAFL+EEQKIVK
Sbjct: 61  EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEEQKIVK 104


>09_04_0106 -
           14636773-14636863,14636948-14637057,14638107-14638186,
           14638302-14638380
          Length = 119

 Score =  124 bits (299), Expect = 1e-28
 Identities = 62/104 (59%), Positives = 76/104 (73%), Gaps = 2/104 (1%)
 Frame = +2

Query: 80  MVQRLTFRRRLSYNTKSNQRXIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 259
           MVQRLT+R+R SY TKSNQ  +V+TPGG+LVYQY KK    P+C     K++GI   RPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 60

Query: 260 E--RSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVK 385
           E  RSRL   ++TV R YGGVL    V++RI+RAFL+EEQKIVK
Sbjct: 61  EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAFLVEEQKIVK 104


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,430,642
Number of Sequences: 37544
Number of extensions: 189341
Number of successful extensions: 393
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 390
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3736328292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)