Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_I23
         (1171 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024762-2|AAF59474.3|  384|Caenorhabditis elegans Vacuolar h at...   258   7e-69
AB009567-1|BAA75067.1|  384|Caenorhabditis elegans Vha11 protein...   258   7e-69
AC024762-3|AAO91689.2|  133|Caenorhabditis elegans Vacuolar h at...   117   1e-26
U00048-11|AAB53833.1|  995|Caenorhabditis elegans Hypothetical p...    30   2.7  
Z46242-8|CAA86329.1|  301|Caenorhabditis elegans Hypothetical pr...    29   8.4  

>AC024762-2|AAF59474.3|  384|Caenorhabditis elegans Vacuolar h
           atpase protein 11, isoforma protein.
          Length = 384

 Score =  258 bits (631), Expect = 7e-69
 Identities = 122/230 (53%), Positives = 160/230 (69%)
 Frame = +3

Query: 144 EYWVISAPGDKTCQQTWDTLNNATKSGNLSVNYKFPIPDLKVGTLDQLVGLSDDLGKLDT 323
           EYW+IS PG+K     WD LN +T  GN S N K+ IPDLKVGTLDQLVGLSDDL KLDT
Sbjct: 8   EYWLISVPGEKGANDAWDKLNRST--GNTSTNSKYLIPDLKVGTLDQLVGLSDDLSKLDT 65

Query: 324 FVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQWDMAKYPIKQSLRNIAD 503
             E V RK+ QY  EVLE+ + K+ ENL+  N D+ TY+T+FQW+ AKYP+KQSL+ +++
Sbjct: 66  SAEAVIRKLVQYFTEVLEEDKSKIAENLVIGNKDMKTYVTKFQWEGAKYPLKQSLKVLSE 125

Query: 504 IISKQVGQIDADLKVKSSAYNALKGNLHNLEKKQTGSLLTRNLADLVKKEHFILDSEYLT 683
           II KQ+ QID DLKVKS  YN LK  L ++++K  GSLLT++LADLVK + F+L+SEYL 
Sbjct: 126 IIGKQISQIDNDLKVKSLTYNNLKNALASMDRKTVGSLLTKDLADLVKADDFVLNSEYLQ 185

Query: 684 TLLVIVPXSMFNDWNANYXKITDMIVPXSTXLXHXXXXYGLFXXTLXXXV 833
           T++V+VP     +W   Y  ++ M+VP S+ L      + L+  TL   V
Sbjct: 186 TVIVVVPKISVKEWEQKYATLSSMVVPGSSKLLTEEGEHALYTVTLFKKV 235


>AB009567-1|BAA75067.1|  384|Caenorhabditis elegans Vha11 protein
           protein.
          Length = 384

 Score =  258 bits (631), Expect = 7e-69
 Identities = 122/230 (53%), Positives = 160/230 (69%)
 Frame = +3

Query: 144 EYWVISAPGDKTCQQTWDTLNNATKSGNLSVNYKFPIPDLKVGTLDQLVGLSDDLGKLDT 323
           EYW+IS PG+K     WD LN +T  GN S N K+ IPDLKVGTLDQLVGLSDDL KLDT
Sbjct: 8   EYWLISVPGEKGANDAWDKLNRST--GNTSTNSKYLIPDLKVGTLDQLVGLSDDLSKLDT 65

Query: 324 FVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQWDMAKYPIKQSLRNIAD 503
             E V RK+ QY  EVLE+ + K+ ENL+  N D+ TY+T+FQW+ AKYP+KQSL+ +++
Sbjct: 66  SAEAVIRKLVQYFTEVLEEDKSKIAENLVIGNKDMKTYVTKFQWEGAKYPLKQSLKVLSE 125

Query: 504 IISKQVGQIDADLKVKSSAYNALKGNLHNLEKKQTGSLLTRNLADLVKKEHFILDSEYLT 683
           II KQ+ QID DLKVKS  YN LK  L ++++K  GSLLT++LADLVK + F+L+SEYL 
Sbjct: 126 IIGKQISQIDNDLKVKSLTYNNLKNALASMDRKTVGSLLTKDLADLVKADDFVLNSEYLQ 185

Query: 684 TLLVIVPXSMFNDWNANYXKITDMIVPXSTXLXHXXXXYGLFXXTLXXXV 833
           T++V+VP     +W   Y  ++ M+VP S+ L      + L+  TL   V
Sbjct: 186 TVIVVVPKISVKEWEQKYATLSSMVVPGSSKLLTEEGEHALYTVTLFKKV 235


>AC024762-3|AAO91689.2|  133|Caenorhabditis elegans Vacuolar h
           atpase protein 11, isoformb protein.
          Length = 133

 Score =  117 bits (282), Expect = 1e-26
 Identities = 56/92 (60%), Positives = 65/92 (70%)
 Frame = +3

Query: 144 EYWVISAPGDKTCQQTWDTLNNATKSGNLSVNYKFPIPDLKVGTLDQLVGLSDDLGKLDT 323
           EYW+IS PG+K     WD LN +T  GN S N K+ IPDLKVGTLDQLVGLSDDL KLDT
Sbjct: 8   EYWLISVPGEKGANDAWDKLNRST--GNTSTNSKYLIPDLKVGTLDQLVGLSDDLSKLDT 65

Query: 324 FVEGVTRKVAQYLGEVLEDQRDKLHENLMANN 419
             E V RK+ QY  EVLE+ + K+ ENL+  N
Sbjct: 66  SAEAVIRKLVQYFTEVLEEDKSKIAENLVIGN 97


>U00048-11|AAB53833.1|  995|Caenorhabditis elegans Hypothetical
           protein C05D11.1 protein.
          Length = 995

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = -3

Query: 572 ESVVGGGLDLQIRVDLSDLFAYDVGDIPQTLLYGVLSHVPLEASQISG*VTVIGHQVFM 396
           E+V+ GG+ L +    +      +G++P  +++G +S V  EA    G    + H VFM
Sbjct: 11  ETVLNGGIKLFLYSSKNTKLRVAIGEVPGPMVHGAVSFV-TEADSDDGLPHTLEHLVFM 68


>Z46242-8|CAA86329.1|  301|Caenorhabditis elegans Hypothetical
           protein F35G12.10 protein.
          Length = 301

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +3

Query: 435 YLTRFQWDMAKYPIKQSLRNIADIISKQVGQIDADLKVKSSAYNALKG 578
           YL   +   A++   Q L+ I D + KQV Q D   K   +A   LKG
Sbjct: 251 YLKETEETKARFERDQLLKLINDSVEKQVSQKDFQEKFLQNAIQQLKG 298


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,656,213
Number of Sequences: 27780
Number of extensions: 339397
Number of successful extensions: 995
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3192944148
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)