Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_I22
(1181 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000195-7|AAC24270.1| 676|Caenorhabditis elegans Oxysterol bin... 57 3e-08
Z79754-5|CAB02094.2| 573|Caenorhabditis elegans Hypothetical pr... 48 2e-05
AL117202-14|CAB57894.2| 766|Caenorhabditis elegans Hypothetical... 44 3e-04
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 29 4.8
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 29 4.8
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 29 4.8
Z73969-16|CAD44085.1| 254|Caenorhabditis elegans Hypothetical p... 29 6.4
Z73969-15|CAA98238.1| 546|Caenorhabditis elegans Hypothetical p... 29 6.4
Z73969-14|CAA98240.1| 541|Caenorhabditis elegans Hypothetical p... 29 6.4
AF072380-1|AAC62467.1| 546|Caenorhabditis elegans Akt/PKB serin... 29 6.4
AF072379-1|AAC62466.1| 541|Caenorhabditis elegans Akt/PKB serin... 29 6.4
AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical... 29 6.4
Z81074-2|CAB03038.2| 671|Caenorhabditis elegans Hypothetical pr... 29 8.5
>AF000195-7|AAC24270.1| 676|Caenorhabditis elegans Oxysterol
binding protein (osbp)related protein 4, isoform a
protein.
Length = 676
Score = 56.8 bits (131), Expect = 3e-08
Identities = 33/92 (35%), Positives = 48/92 (52%)
Frame = +1
Query: 142 LSGQLYKYTNVVKGWQQRWFAVDPETGVLSYYLYDGPGDTIQPGQPARGEAHLAAAVICP 321
+ G L K+TN+V GWQ RWF ++ +T L YY + + GQ RG+ L AV+
Sbjct: 1 MEGPLSKWTNMVHGWQYRWFKIENDT--LLYYT---SREKMLKGQ-QRGQIRLTGAVVGI 54
Query: 322 SDEDSKTFTINCASGDMLKLRATDARARQEWV 417
E++ FTI G ++ D R R +WV
Sbjct: 55 DGENNSLFTIT-VEGKTFHMQGRDLRERNQWV 85
>Z79754-5|CAB02094.2| 573|Caenorhabditis elegans Hypothetical
protein F25H2.6 protein.
Length = 573
Score = 47.6 bits (108), Expect = 2e-05
Identities = 27/93 (29%), Positives = 46/93 (49%)
Frame = +1
Query: 139 PLSGQLYKYTNVVKGWQQRWFAVDPETGVLSYYLYDGPGDTIQPGQPARGEAHLAAAVIC 318
P +G + K+TN V GWQ R+F + G L YYL + RG L +A+I
Sbjct: 8 PTNGVMKKWTNYVNGWQDRYFEI--TEGNLVYYL-----SKAEKSHGCRGSIFLKSAIIA 60
Query: 319 PSDEDSKTFTINCASGDMLKLRATDARARQEWV 417
+ D F+I+ + L+A +++++ W+
Sbjct: 61 AHEFDENEFSISMGENVVWYLKAENSQSKLLWM 93
>AL117202-14|CAB57894.2| 766|Caenorhabditis elegans Hypothetical
protein Y47D3A.17a protein.
Length = 766
Score = 43.6 bits (98), Expect = 3e-04
Identities = 34/125 (27%), Positives = 56/125 (44%)
Frame = +1
Query: 145 SGQLYKYTNVVKGWQQRWFAVDPETGVLSYYLYDGPGDTIQPGQPARGEAHLAAAVICPS 324
+G L K+TN +KG++QRWF +D LSY Y P + G RG +L A + +
Sbjct: 64 AGWLNKWTNYLKGYRQRWFVLD-SNATLSY--YRNPSEV---GHTCRGSINLQEARV-HT 116
Query: 325 DEDSKTFTINCASGDMLKLRATDARARQEWVDGLRAIAEIHTKVMGANPPLQPREQLAVH 504
D+ + I+ ++ + RQ+W + L + H + A Q+A
Sbjct: 117 DKTTSCIVIS-GQSQTFHVKPQNEMDRQQWTNSLEYMR--HKAITRAESEEDEDAQMAKT 173
Query: 505 DAMAS 519
D+ S
Sbjct: 174 DSNRS 178
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 29.5 bits (63), Expect = 4.8
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 383 ELPTPARARSGSTGSGPLLRYTP 451
E P PA+ R G+ G GP Y P
Sbjct: 487 ECPNPAKPREGAEGEGPKATYVP 509
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 29.5 bits (63), Expect = 4.8
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 383 ELPTPARARSGSTGSGPLLRYTP 451
E P PA+ R G+ G GP Y P
Sbjct: 487 ECPNPAKPREGAEGEGPKATYVP 509
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 29.5 bits (63), Expect = 4.8
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 383 ELPTPARARSGSTGSGPLLRYTP 451
E P PA+ R G+ G GP Y P
Sbjct: 487 ECPNPAKPREGAEGEGPKATYVP 509
>Z73969-16|CAD44085.1| 254|Caenorhabditis elegans Hypothetical
protein C12D8.10c protein.
Length = 254
Score = 29.1 bits (62), Expect = 6.4
Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 3/113 (2%)
Frame = +1
Query: 142 LSGQLYKYTNVVKGWQQRWFAVDPETGVLSYYLYDGPGDTIQPGQPARGEAHLAAAVICP 321
+ G L+K ++ W+ R+F + + +L + G +P AA +
Sbjct: 18 IEGWLHKKGEHIRNWRPRYFMIFNDGALLGFRAKPKEGQPFP--EPLNDFMIKDAATMLF 75
Query: 322 SDEDSKTFTINCASGDMLKLR---ATDARARQEWVDGLRAIAEIHTKVMGANP 471
F + C + R A A RQ W+ + +I++ + K ANP
Sbjct: 76 EKPRPNMFMVRCLQWTTVIERTFYAESAEVRQRWIHAIESISKKY-KGTNANP 127
>Z73969-15|CAA98238.1| 546|Caenorhabditis elegans Hypothetical
protein C12D8.10b protein.
Length = 546
Score = 29.1 bits (62), Expect = 6.4
Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 3/113 (2%)
Frame = +1
Query: 142 LSGQLYKYTNVVKGWQQRWFAVDPETGVLSYYLYDGPGDTIQPGQPARGEAHLAAAVICP 321
+ G L+K ++ W+ R+F + + +L + G +P AA +
Sbjct: 18 IEGWLHKKGEHIRNWRPRYFMIFNDGALLGFRAKPKEGQPFP--EPLNDFMIKDAATMLF 75
Query: 322 SDEDSKTFTINCASGDMLKLR---ATDARARQEWVDGLRAIAEIHTKVMGANP 471
F + C + R A A RQ W+ + +I++ + K ANP
Sbjct: 76 EKPRPNMFMVRCLQWTTVIERTFYAESAEVRQRWIHAIESISKKY-KGTNANP 127
>Z73969-14|CAA98240.1| 541|Caenorhabditis elegans Hypothetical
protein C12D8.10a protein.
Length = 541
Score = 29.1 bits (62), Expect = 6.4
Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 3/113 (2%)
Frame = +1
Query: 142 LSGQLYKYTNVVKGWQQRWFAVDPETGVLSYYLYDGPGDTIQPGQPARGEAHLAAAVICP 321
+ G L+K ++ W+ R+F + + +L + G +P AA +
Sbjct: 18 IEGWLHKKGEHIRNWRPRYFMIFNDGALLGFRAKPKEGQPFP--EPLNDFMIKDAATMLF 75
Query: 322 SDEDSKTFTINCASGDMLKLR---ATDARARQEWVDGLRAIAEIHTKVMGANP 471
F + C + R A A RQ W+ + +I++ + K ANP
Sbjct: 76 EKPRPNMFMVRCLQWTTVIERTFYAESAEVRQRWIHAIESISKKY-KGTNANP 127
>AF072380-1|AAC62467.1| 546|Caenorhabditis elegans Akt/PKB
serine/threonine kinase protein.
Length = 546
Score = 29.1 bits (62), Expect = 6.4
Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 3/113 (2%)
Frame = +1
Query: 142 LSGQLYKYTNVVKGWQQRWFAVDPETGVLSYYLYDGPGDTIQPGQPARGEAHLAAAVICP 321
+ G L+K ++ W+ R+F + + +L + G +P AA +
Sbjct: 18 IEGWLHKKGEHIRNWRPRYFMIFNDGALLGFRAKPKEGQPFP--EPLNDFMIKDAATMLF 75
Query: 322 SDEDSKTFTINCASGDMLKLR---ATDARARQEWVDGLRAIAEIHTKVMGANP 471
F + C + R A A RQ W+ + +I++ + K ANP
Sbjct: 76 EKPRPNMFMVRCLQWTTVIERTFYAESAEVRQRWIHAIESISKKY-KGTNANP 127
>AF072379-1|AAC62466.1| 541|Caenorhabditis elegans Akt/PKB
serine/threonine kinase protein.
Length = 541
Score = 29.1 bits (62), Expect = 6.4
Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 3/113 (2%)
Frame = +1
Query: 142 LSGQLYKYTNVVKGWQQRWFAVDPETGVLSYYLYDGPGDTIQPGQPARGEAHLAAAVICP 321
+ G L+K ++ W+ R+F + + +L + G +P AA +
Sbjct: 18 IEGWLHKKGEHIRNWRPRYFMIFNDGALLGFRAKPKEGQPFP--EPLNDFMIKDAATMLF 75
Query: 322 SDEDSKTFTINCASGDMLKLR---ATDARARQEWVDGLRAIAEIHTKVMGANP 471
F + C + R A A RQ W+ + +I++ + K ANP
Sbjct: 76 EKPRPNMFMVRCLQWTTVIERTFYAESAEVRQRWIHAIESISKKY-KGTNANP 127
>AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical
protein Y110A7A.8 protein.
Length = 504
Score = 29.1 bits (62), Expect = 6.4
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = -1
Query: 512 MASWTASCSLGCRGGLAPITLVCI-SAMALSPSTHSWRARASVALSFNMSPDAQFMVKVL 336
+ S T S + G + L P L + A L+ H R + + M+ A +V +L
Sbjct: 175 VVSVTVSTTQGVK--LEPNELETVMDACNLAAQLHVNRLEMHQLVEWRMALIAPNLVALL 232
Query: 335 ESSSLGHITAAAK*ASPLAGCPGCIV 258
S++ H+ + A SPLA P C V
Sbjct: 233 GSTTTAHLVSQAGGLSPLATMPSCNV 258
>Z81074-2|CAB03038.2| 671|Caenorhabditis elegans Hypothetical
protein F32B6.2 protein.
Length = 671
Score = 28.7 bits (61), Expect = 8.5
Identities = 21/89 (23%), Positives = 37/89 (41%)
Frame = +1
Query: 100 GMKMMKTGLTSHRPLSGQLYKYTNVVKGWQQRWFAVDPETGVLSYYLYDGPGDTIQPGQP 279
G +M G+ + + Q+++ + + G AV P G++ L PG+ + GQ
Sbjct: 571 GNSLMVNGVGQNEYETPQIHETFDSLSGGAASHSAVAPMPGIIEKILVK-PGEQVTTGQA 629
Query: 280 ARGEAHLAAAVICPSDEDSKTFTINCASG 366
+ I + EDS I C +G
Sbjct: 630 LVVMTAMKMEYIIRAPEDSTVEHIKCQAG 658
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,086,830
Number of Sequences: 27780
Number of extensions: 357610
Number of successful extensions: 1048
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3234681980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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