Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_I18
(1322 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 53 1e-07
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 43 1e-04
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 42 2e-04
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 39 0.002
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 38 0.002
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 35 0.022
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.12
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 31 0.19
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 32 0.20
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 29 1.4
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 29 1.9
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 5.8
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 7.7
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 52.8 bits (121), Expect = 1e-07
Identities = 39/136 (28%), Positives = 43/136 (31%), Gaps = 6/136 (4%)
Frame = -3
Query: 690 PPXXPXXXXXXRGXPPPXXXPPXPPPXXXGPXXPPPXPPXXPXXPXXXGXAPHNXX-PPX 514
PP P R PP PP G PP P P P A ++ PP
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPL 292
Query: 513 PPPXXXX----FXXXKXXXPPPPPPXPQ-KXXPXXXRAXFXPXNXGXLPXXPPXLEQKXX 349
PPP K PPPPPP + + P N P PP
Sbjct: 293 PPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNG---SSNSSLPPPPPPPRSNAAG 349
Query: 348 SFPPXXXGXXPPPPXP 301
S P G PPP P
Sbjct: 350 SIPLPPQGRSAPPPPP 365
Score = 38.3 bits (85), Expect = 0.002
Identities = 26/91 (28%), Positives = 27/91 (29%), Gaps = 2/91 (2%)
Frame = -3
Query: 711 PPPXXX--PPPXXPXXXXXXRGXPPPXXXPPXPPPXXXGPXXPPPXPPXXPXXPXXXGXA 538
PPP P P R PP PP PP P PP PP P
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAP-PSLPPSAPPSLPMGAPAAPPL 449
Query: 537 PHNXXPPXPPPXXXXFXXXKXXXPPPPPPXP 445
P + P P P PPP P
Sbjct: 450 PPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 37.9 bits (84), Expect = 0.003
Identities = 44/179 (24%), Positives = 46/179 (25%), Gaps = 12/179 (6%)
Frame = -3
Query: 801 PXXXPPPXXXXXXXXXXXGGXAPXXXXXXXPPPXXXPPPXXPXXXXXXRGXPPPXXXPP- 625
P PPP G + PPP P PPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 624 ----XPPP-----XXXGPXXPPPXPP--XXPXXPXXXGXAPHNXXPPXPPPXXXXFXXXK 478
PPP P PPP P P P G A PP P P
Sbjct: 371 STGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALP-PLGNASRTSTPPVPTPPSLPPSAPP 429
Query: 477 XXXPPPPPPXPQKXXPXXXRAXFXPXNXGXLPXXPPXLEQKXXSFPPXXXGXXPPPPXP 301
P PP P A P P PP L + PP PPP P
Sbjct: 430 SLPPSAPPSLPM-------GAPAAPPLPPSAPIAPP-LPAGMPAAPPLPPAAPAPPPAP 480
Score = 37.9 bits (84), Expect = 0.003
Identities = 28/93 (30%), Positives = 28/93 (30%)
Frame = -3
Query: 708 PPXXXPPPXXPXXXXXXRGXPPPXXXPPXPPPXXXGPXXPPPXPPXXPXXPXXXGXAPHN 529
PP PP P PP P PP G PP PP P P P
Sbjct: 415 PPVPTPPSLPPSA--------PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMP-- 464
Query: 528 XXPPXPPPXXXXFXXXKXXXPPPPPPXPQKXXP 430
PP PP PPP P P P
Sbjct: 465 AAPPLPP----------AAPAPPPAPAPAPAAP 487
Score = 37.1 bits (82), Expect = 0.005
Identities = 20/61 (32%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Frame = -3
Query: 711 PP--PXXXPPPXXPXXXXXXRGXPPPXXXPPXPPPXXXGPXXPPPXPPXXPXXPXXXGXA 538
PP P PP P PP P PP G PP PP P P A
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPA 483
Query: 537 P 535
P
Sbjct: 484 P 484
Score = 35.1 bits (77), Expect = 0.022
Identities = 34/128 (26%), Positives = 38/128 (29%), Gaps = 10/128 (7%)
Frame = -3
Query: 654 GXPPPXXXPPXPP------PXXXGPXXPPPXPPXXPXXPXXXGXAPHNXXPPXPPPXXXX 493
G P PP PP P P P PP P +P N P P
Sbjct: 222 GTPTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMN 281
Query: 492 FXXXKXXXPPPPPPXPQKXXPXXXRAXFXPXNXGXLPXXPPXLEQKXXSFPPXXXG---- 325
PP PPP + A N P PP ++ PP G
Sbjct: 282 PAINSTSKPPLPPPSSR------VSAAALAANK-KRPPPPPPPSRRNRGKPPIGNGSSNS 334
Query: 324 XXPPPPXP 301
PPPP P
Sbjct: 335 SLPPPPPP 342
Score = 30.3 bits (65), Expect = 0.62
Identities = 17/61 (27%), Positives = 17/61 (27%)
Frame = -3
Query: 738 APXXXXXXXPPPXXXPPPXXPXXXXXXRGXPPPXXXPPXPPPXXXGPXXPPPXPPXXPXX 559
AP PP P P PP P PP PPP P P
Sbjct: 427 APPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAA 486
Query: 558 P 556
P
Sbjct: 487 P 487
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/53 (28%), Positives = 15/53 (28%)
Frame = -2
Query: 688 PXXPXXXXXXPRXAPPPXXPPXPPPXXXXXXXXPPXXXPXPXXPXXXXKXPPQ 530
P P P P P P PP PP P P P PQ
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAPVASIAELPQ 496
Score = 26.6 bits (56), Expect = 7.7
Identities = 19/68 (27%), Positives = 19/68 (27%), Gaps = 1/68 (1%)
Frame = -2
Query: 706 PPXXXXPXXPXXXXXXPRXAPPPXXPPXPPPXXXXXXXXPPXXXPXPXXP-XXXXKXPPQ 530
PP P APPP PP PP P P P
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPI-----PPPSNGTVSSPPNSPPRPIAPVSMNPAINST 287
Query: 529 PXPPXPPP 506
PP PPP
Sbjct: 288 SKPPLPPP 295
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 42.7 bits (96), Expect = 1e-04
Identities = 37/134 (27%), Positives = 38/134 (28%)
Frame = -3
Query: 711 PPPXXXPPPXXPXXXXXXRGXPPPXXXPPXPPPXXXGPXXPPPXPPXXPXXPXXXGXAPH 532
P P PP P P P PP P P P P P P P P AP
Sbjct: 1095 PKPSVAAPPV-PKPSVAVPPVPAPSGAPPVPKPSVAAP--PVPVPSGAPPVPKPSVAAPP 1151
Query: 531 NXXPPXPPPXXXXFXXXKXXXPPPPPPXPQKXXPXXXRAXFXPXNXGXLPXXPPXLEQKX 352
P PP K PP P P P P +P PP E
Sbjct: 1152 VPAPSGAPP------VPKPSVAAPPVPAPSSGIPP------VPKPAAGVPPVPPPSEAPP 1199
Query: 351 XSFPPXXXGXXPPP 310
P PPP
Sbjct: 1200 VPKPSVGVPPVPPP 1213
Score = 41.9 bits (94), Expect = 2e-04
Identities = 37/145 (25%), Positives = 43/145 (29%), Gaps = 9/145 (6%)
Frame = -3
Query: 708 PPXXXPPPXXPXXXXXXRGXPP--PXXXPPXPPPXXXGPXXPPPXP---PXXPXXPXXXG 544
PP P P P P PP P P PPP P P P G
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSG 1081
Query: 543 XAP---HNXXPPXPPPXXXXFXXXKXXXPPPPPPXPQKXXPXXXRAXFXPXNXGXLPXXP 373
P + PP P P K PP P P P + P +P
Sbjct: 1082 APPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAP--PVPVPSGA 1139
Query: 372 PXLEQKXXSFPP-XXXGXXPPPPXP 301
P + + + PP PP P P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKP 1164
Score = 38.3 bits (85), Expect = 0.002
Identities = 29/110 (26%), Positives = 29/110 (26%), Gaps = 5/110 (4%)
Frame = -3
Query: 744 GXAPXXXXXXXPPPXXXPP--PXXPXXXXXXRGXPPPXXXPPXPPPXXXGPXXPPPXPPX 571
G P PP P P P P P PP P P P P P
Sbjct: 1119 GAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP-SSG 1177
Query: 570 XPXXPXXXGXAPHNXXPPXPPPXXXXFXXXKXXXPP---PPPPXPQKXXP 430
P P P P PP PP PP P P P
Sbjct: 1178 IPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLP 1227
Score = 36.7 bits (81), Expect = 0.007
Identities = 19/67 (28%), Positives = 19/67 (28%)
Frame = -2
Query: 709 PPPXXXXPXXPXXXXXXPRXAPPPXXPPXPPPXXXXXXXXPPXXXPXPXXPXXXXKXPPQ 530
P P P P P PP PP P P PP P P P
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPV 1231
Query: 529 PXPPXPP 509
P PP
Sbjct: 1232 PTAKAPP 1238
Score = 35.5 bits (78), Expect = 0.017
Identities = 35/144 (24%), Positives = 39/144 (27%), Gaps = 7/144 (4%)
Frame = -3
Query: 711 PPPXXXPPPXXPXXXXXXRGXPPPXXXPPXPPPXXXGPXXPP--PXPPXXPXXPXXXGXA 538
P P P P PPP P P P P P P P P A
Sbjct: 1042 PVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAA 1101
Query: 537 -----PHNXXPPXPPPXXXXFXXXKXXXPPPPPPXPQKXXPXXXRAXFXPXNXGXLPXXP 373
P PP P P K PP P P P + P P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAP-PVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPA--PSGA 1158
Query: 372 PXLEQKXXSFPPXXXGXXPPPPXP 301
P + + + PP PP P
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVP 1182
Score = 34.3 bits (75), Expect = 0.038
Identities = 35/140 (25%), Positives = 37/140 (26%), Gaps = 3/140 (2%)
Frame = -3
Query: 711 PPPXXXPPPXXPXXXXXXRGXP---PPXXXPPXPPPXXXGPXXPPPXPPXXPXXPXXXGX 541
P P PP P P PP P P P PP P P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV--P 1172
Query: 540 APHNXXPPXPPPXXXXFXXXKXXXPPPPPPXPQKXXPXXXRAXFXPXNXGXLPXXPPXLE 361
AP + PP P P PP PPP P P P P +
Sbjct: 1173 APSSGIPPVPKP--------AAGVPPVPPPSEAPPVP-KPSVGVPPVPP---PSTAPPVP 1220
Query: 360 QKXXSFPPXXXGXXPPPPXP 301
PP PP P
Sbjct: 1221 TPSAGLPPVPVPTAKAPPVP 1240
Score = 34.3 bits (75), Expect = 0.038
Identities = 20/68 (29%), Positives = 20/68 (29%)
Frame = -2
Query: 709 PPPXXXXPXXPXXXXXXPRXAPPPXXPPXPPPXXXXXXXXPPXXXPXPXXPXXXXKXPPQ 530
P P P P P P PP PPP P P P K PP
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAG--LPPVPVPTAKAPPV 1239
Query: 529 PXPPXPPP 506
P P P
Sbjct: 1240 PAPSSEAP 1247
Score = 34.3 bits (75), Expect = 0.038
Identities = 22/69 (31%), Positives = 22/69 (31%)
Frame = -3
Query: 711 PPPXXXPPPXXPXXXXXXRGXPPPXXXPPXPPPXXXGPXXPPPXPPXXPXXPXXXGXAPH 532
PPP PP P PPP PP P P P P P P P AP
Sbjct: 1192 PPPSEAPPVPKPSVGVPP--VPPPSTAPPVPTPSAGLPPVPVP-TAKAPPVPAPSSEAPS 1248
Query: 531 NXXPPXPPP 505
P P
Sbjct: 1249 VSTPRSSVP 1257
Score = 33.5 bits (73), Expect = 0.067
Identities = 29/126 (23%), Positives = 32/126 (25%)
Frame = -3
Query: 678 PXXXXXXRGXPPPXXXPPXPPPXXXGPXXPPPXPPXXPXXPXXXGXAPHNXXPPXPPPXX 499
P + P P PP P P P P P AP + PP P P
Sbjct: 1013 PVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAP-SAPPPVPAP-S 1070
Query: 498 XXFXXXKXXXPPPPPPXPQKXXPXXXRAXFXPXNXGXLPXXPPXLEQKXXSFPPXXXGXX 319
PP P P P + P PP P
Sbjct: 1071 SEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAA 1130
Query: 318 PPPPXP 301
PP P P
Sbjct: 1131 PPVPVP 1136
Score = 33.1 bits (72), Expect = 0.088
Identities = 21/70 (30%), Positives = 21/70 (30%), Gaps = 2/70 (2%)
Frame = -2
Query: 709 PPPXXXXPXXPXXXXXXPRXAPPPXXPPXPPPXXXXXXXXPPXXXP--XPXXPXXXXKXP 536
P P P P P P PP P P PP P P P P
Sbjct: 1095 PKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP----SVAAPPVPVPSGAPPVPKPSVAAP 1150
Query: 535 PQPXPPXPPP 506
P P P PP
Sbjct: 1151 PVPAPSGAPP 1160
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 41.9 bits (94), Expect = 2e-04
Identities = 31/133 (23%), Positives = 35/133 (26%), Gaps = 3/133 (2%)
Frame = -3
Query: 690 PPXXPXXXXXXRGXPPPXXXPPXPPPXXXGPXXPPPXPPXXPXXPXXXGXAPHNXXPPXP 511
PP P PP PP P P PP P P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 510 PPXXXXFXXXKXXXPPPPPPXPQKXXPXXXRAXFXPXNXGXLPXXPPXLEQKXXSFP--- 340
PP PP PP P P + P + P + + FP
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSS-RPSSFAPPAGHAPNVTSESPKFPNRG 242
Query: 339 PXXXGXXPPPPXP 301
P PP P
Sbjct: 243 PSIPSASVPPVPP 255
Score = 35.5 bits (78), Expect = 0.017
Identities = 24/85 (28%), Positives = 24/85 (28%)
Frame = -3
Query: 711 PPPXXXPPPXXPXXXXXXRGXPPPXXXPPXPPPXXXGPXXPPPXPPXXPXXPXXXGXAPH 532
PP PP P P PP P P PP P P P AP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLP--PPAQPAAPV 181
Query: 531 NXXPPXPPPXXXXFXXXKXXXPPPP 457
PP P PPPP
Sbjct: 182 K-SPPSAPSLPSAVPPMPPKVPPPP 205
Score = 27.1 bits (57), Expect = 5.8
Identities = 16/67 (23%), Positives = 18/67 (26%)
Frame = -2
Query: 709 PPPXXXXPXXPXXXXXXPRXAPPPXXPPXPPPXXXXXXXXPPXXXPXPXXPXXXXKXPPQ 530
PP P P + A P PP P PP P P +
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSR 217
Query: 529 PXPPXPP 509
P PP
Sbjct: 218 PSSFAPP 224
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 38.7 bits (86), Expect = 0.002
Identities = 29/91 (31%), Positives = 29/91 (31%)
Frame = +2
Query: 419 RXXXGXXFWGXGGGGGGXXXFXXXKXXXXXXXXXXXWLWGAFPXXXGXXGXXGGXGGGXX 598
R G F G GGG GG G G G GG GG
Sbjct: 183 RGHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGG 242
Query: 599 GPXXXGGGXGGXXXGGGXPRXXXXXXGXXGG 691
GP GGG GG GG P G GG
Sbjct: 243 GPGGFGGGLGGF---GGGPGGFGGGPGGHGG 270
Score = 36.3 bits (80), Expect = 0.009
Identities = 29/94 (30%), Positives = 30/94 (31%)
Frame = +2
Query: 431 GXXFWGXGGGGGGXXXFXXXKXXXXXXXXXXXWLWGAFPXXXGXXGXXGGXGGGXXGPXX 610
G F G GGG F +G F G GG GG GP
Sbjct: 177 GNLFHHRGHNGGGFGGFGGGSGGPPPGPGG----FGGFGGFGGEGHHHGGHGGFGGGPGG 232
Query: 611 XGGGXGGXXXGGGXPRXXXXXXGXXGGGXXXGGG 712
GG GG GG P G GGG GG
Sbjct: 233 FEGGPGGF---GGGPGGFGGGLGGFGGGPGGFGG 263
Score = 31.5 bits (68), Expect = 0.27
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +2
Query: 557 GXXGXXGGXGGGXXGPXXXGGGXGGXXXGGGXP 655
G G GG GGG G GG GG G G P
Sbjct: 239 GFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGP 271
Score = 30.7 bits (66), Expect = 0.47
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 557 GXXGXXGGXGGGXXGPXXXGGGXGGXXXGG 646
G G GG GG GP GGG GG G
Sbjct: 243 GPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 38.3 bits (85), Expect = 0.002
Identities = 28/84 (33%), Positives = 30/84 (35%), Gaps = 1/84 (1%)
Frame = -3
Query: 690 PPXXPXXXXXXRGXPPPXXXPPXPPPXXXGPXXPPPXPPXXPXXPXXXGXAPHNXXPPXP 511
PP P P P PP P P GP PPP PP P G P PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPP-PAPIMGGP--PPPPPP-----PGVAGAGP---PPPPP 780
Query: 510 PPXXXXFXXXKXXXP-PPPPPXPQ 442
PP + P P P P+
Sbjct: 781 PPPAVSAGGSRYYAPAPQAEPEPK 804
Score = 36.7 bits (81), Expect = 0.007
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -3
Query: 711 PPPXXXPPPXXPXXXXXXRGXPPPXXXPPXPPPXXXGPXXPPPXPPXXP 565
PPP P P P PP PPP PPP PP P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 34.3 bits (75), Expect = 0.038
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 5/50 (10%)
Frame = -3
Query: 708 PPXXXPPPXXPXXXXXXRGXPPPXXX-----PPXPPPXXXGPXXPPPXPP 574
PP P P PPP PP PPP G PPP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 34.3 bits (75), Expect = 0.038
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -1
Query: 710 PPPXXXXPXXXPXXXXXSAXXPPPXXAPXXPPXXGXXXXXPPPXXPXPP 564
PPP P P P P PP G PPP P PP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.9 bits (64), Expect = 0.82
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 3/52 (5%)
Frame = -3
Query: 711 PPPXXX---PPPXXPXXXXXXRGXPPPXXXPPXPPPXXXGPXXPPPXPPXXP 565
PPP PPP P G PPP PP P G P P P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPP--PPPPPAVSAGGSRYYAPAPQAEP 801
Score = 29.5 bits (63), Expect = 1.1
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = -3
Query: 468 PPPPPPXPQKXXPXXXRAXFXPXNX--GXLPXXPPXLEQKXXSFPPXXXGXXPPPPXP 301
PPPPPP P P G P PP PP G PPPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP---------PPGVAGAGPPPPPP 780
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -3
Query: 738 APXXXXXXXPPPXXXPPPXXPXXXXXXRGXPPPXXXPPXPPP 613
AP P P PP P PPP PP PPP
Sbjct: 745 APAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP---PPPPPP 783
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 35.1 bits (77), Expect = 0.022
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -3
Query: 648 PPPXXXPPXPPPXXXGPXXPPPXPP 574
PP PP PPP P PPP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 29.9 bits (64), Expect = 0.82
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -3
Query: 708 PPXXXPPPXXPXXXXXXRGXPPPXXXPPXPPP 613
PP PPP P G PP PP PPP
Sbjct: 5 PPGNPPPPPPPP------GFEPPSQPPPPPPP 30
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 537 PHNXXPPXPPPXXXXFXXXKXXXPPPPPPXPQK 439
P N PP PPP F PPPPP +K
Sbjct: 6 PGNPPPPPPPPG---FEPPSQPPPPPPPGYVKK 35
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 591 PPPXPPXXPXXPXXXGXAPHNXXPPXPPP 505
PP PP P P G P + PP PPP
Sbjct: 5 PPGNPPPPPPPP---GFEPPSQPPPPPPP 30
Score = 29.1 bits (62), Expect = 1.4
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -2
Query: 586 PXXXPXPXXPXXXXKXPPQPXPPXPP 509
P P P P + P QP PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = -2
Query: 646 PPPXXPPXPPPXXXXXXXXPPXXXPXPXXPXXXXKXPPQ 530
PP PP PPP PP P K P Q
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTPAQ 43
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.7 bits (71), Expect = 0.12
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 2/59 (3%)
Frame = -3
Query: 747 GGXAPXXXXXXXPPPXXXPPPXXPXXXXXXRGXPPPXXXPPXP--PPXXXGPXXPPPXP 577
GG AP P P P PPP PP P PP GP PP P
Sbjct: 1679 GGMAPAHPVSTPP---VRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/47 (31%), Positives = 15/47 (31%), Gaps = 2/47 (4%)
Frame = -3
Query: 645 PPXXXPPXPPPXXXGPXXPPP--XPPXXPXXPXXXGXAPHNXXPPXP 511
PP PP P PPP P P P P PP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 29.1 bits (62), Expect = 1.4
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Frame = -3
Query: 648 PPPXXXPPXPPPXXXGPXXP--PPXPPXXPXXPXXXGXAPHNXXPPXPPP 505
PP P PPP P P PP P P P P + P P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP--PLPASSAPSVPNP 1746
Score = 28.3 bits (60), Expect = 2.5
Identities = 25/94 (26%), Positives = 25/94 (26%), Gaps = 4/94 (4%)
Frame = -3
Query: 711 PPPXXXPPPXXPXXXXXXRGXPPPXXXPPXPPPXXXGPXXPP--PXPPXXP--XXPXXXG 544
P P P P P P P P P P P P P P
Sbjct: 1449 PAPMHAVAPVQPKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVPSMIPSVAQQPPSS 1508
Query: 543 XAPHNXXPPXPPPXXXXFXXXKXXXPPPPPPXPQ 442
AP PP F P P PP PQ
Sbjct: 1509 VAPATAPSSTLPPSQSSF----AHVPSPAPPAPQ 1538
Score = 28.3 bits (60), Expect = 2.5
Identities = 17/61 (27%), Positives = 17/61 (27%), Gaps = 2/61 (3%)
Frame = -2
Query: 703 PXXXXPXXPXXXXXXPRXAPPPXXPP--XPPPXXXXXXXXPPXXXPXPXXPXXXXKXPPQ 530
P P P AP P PP PPP P P P P P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPN 1745
Query: 529 P 527
P
Sbjct: 1746 P 1746
Score = 27.9 bits (59), Expect = 3.3
Identities = 16/54 (29%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = -3
Query: 456 PPXPQKXXPXXXRAXFXPXNXGXLPXXPPXLEQKXXSFPPXXXG--XXPPPPXP 301
P P P ++ P P PP S PP G PPPP P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.9 bits (59), Expect = 3.3
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -3
Query: 711 PPPXXXPPPXXPXXXXXXRGXPPPXXXPPXPPPXXXGPXXPPP 583
PPP PPP P G P PP P P P P P
Sbjct: 1709 PPPMSVPPP--PSAPPMPAGPPSA---PPPPLPASSAPSVPNP 1746
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -1
Query: 659 SAXXPPPXXAPXXPPXXGXXXXXPPPXXPXPP 564
SA PPP PP PP P PP
Sbjct: 1703 SAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.1 bits (57), Expect = 5.8
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -2
Query: 649 APPPXXPPXPPPXXXXXXXXPPXXXPXPXXPXXXXKXPPQPXPPXPPP 506
APP P PPP PP P P PP PP P P
Sbjct: 1698 APPQMSAPTPPP--------PPMSVPPPPSAPPMPAGPPSA-PPPPLP 1736
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 31.5 bits (68), Expect = 0.27
Identities = 20/72 (27%), Positives = 21/72 (29%), Gaps = 6/72 (8%)
Frame = -3
Query: 648 PPPXXXPPXPPPXXXGPXXPPPXPP------XXPXXPXXXGXAPHNXXPPXPPPXXXXFX 487
PP P P P PPP PP P + P PP
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQA 232
Query: 486 XXKXXXPPPPPP 451
PPPPPP
Sbjct: 233 DPLPAPPPPPPP 244
Score = 27.9 bits (59), Expect = 3.3
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = -2
Query: 658 PRXAPPPXXPPXPPPXXXXXXXXPPXXXPXPXXPXXXXKXPPQPXPPXPPP 506
P APPP PP PP P PP P P PP
Sbjct: 234 PLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNL-GSQVNIPPPPATPSQPP 283
Score = 25.4 bits (53), Expect(2) = 0.19
Identities = 17/58 (29%), Positives = 18/58 (31%), Gaps = 4/58 (6%)
Frame = -3
Query: 468 PPPPPPXPQKXXPXXXRA----XFXPXNXGXLPXXPPXLEQKXXSFPPXXXGXXPPPP 307
PPPPPP P A + P PP K P PPPP
Sbjct: 189 PPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQAD--PLPAPPPPPPP 244
Score = 25.0 bits (52), Expect(2) = 0.19
Identities = 10/29 (34%), Positives = 12/29 (41%)
Frame = -3
Query: 591 PPPXPPXXPXXPXXXGXAPHNXXPPXPPP 505
PP P P + +N PP PPP
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.9 bits (69), Expect = 0.20
Identities = 22/62 (35%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Frame = +2
Query: 557 GXXGXXGGXGGGXXGPXXXGGGXGGXXXGG-GXPRXXXXXXGXXGGGXXXGGGXXXXXXX 733
G G GG GG G GGG GG GG G R G GG G
Sbjct: 13 GSRGGRGGFNGGRGG---FGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
Query: 734 GA 739
GA
Sbjct: 70 GA 71
Score = 31.1 bits (67), Expect = 0.36
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +2
Query: 557 GXXGXXGGXGGGXXGPXXXGGGXGGXXXGGGXPRXXXXXXGXXGGGXXXGG 709
G G GG GG G GGG GG GGG G G GG
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGG-ARGGGRGGARGGRGGRGGARGGRGG 59
Score = 30.7 bits (66), Expect = 0.47
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = +2
Query: 566 GXXGGXGGGXXGPXXXGGGXGGXXXGGGXPRXXXXXXGXXGGGXXXGG 709
G GG GG G GG GG G G R G GG GG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGAR-GGGRGGARGGRGGRGG 52
Score = 30.7 bits (66), Expect = 0.47
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +3
Query: 507 GGGXGGXGCGGXFXXXXGXXGXGXXXGGXXXXXXXXGGGXGG 632
GGG GG GG G G G GG GG GG
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 27.9 bits (59), Expect = 3.3
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = +3
Query: 510 GGXGGXGCGGXFXXXXGXXGXGXXXGGXXXXXXXXGGGXGGXXG--GGA 650
GG GG G G G G GG GG GG G GGA
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGA 71
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +2
Query: 539 AFPXXXGXXGXXGGXGGGXXGPXXXGGGXGGXXXGGGXPRXXXXXXGXXGGG 694
AF G G GG GG GG G GGG P G G G
Sbjct: 132 AFAGGGGMGGGMGGMGG-MDDDMDMDGGFGTRTRGGGMPGGFANMFGGGGAG 182
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 28.7 bits (61), Expect = 1.9
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = -3
Query: 591 PPPXPPXXPXXPXXXGXAPHNXXPPXPPPXXXXFXXXKXXXPPPPP 454
PPP PP AP + PP PP P P P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAPVP 1927
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.1 bits (57), Expect = 5.8
Identities = 26/105 (24%), Positives = 28/105 (26%), Gaps = 11/105 (10%)
Frame = -3
Query: 711 PPPXXXPP----PXXPXXXXXXRGXPPPXXX-------PPXPPPXXXGPXXPPPXPPXXP 565
PPP P P P PPP PP P G PPP P
Sbjct: 222 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 281
Query: 564 XXPXXXGXAPHNXXPPXPPPXXXXFXXXKXXXPPPPPPXPQKXXP 430
H PPP + PPP P + P
Sbjct: 282 GEHMPPPPMHHEPGEHMPPP-PMHHEPGEHMPPPPMHHEPGEHMP 325
Score = 26.6 bits (56), Expect = 7.7
Identities = 25/96 (26%), Positives = 25/96 (26%), Gaps = 11/96 (11%)
Frame = -3
Query: 711 PPPXXXPP----PXXPXXXXXXRGXPPPXXX-------PPXPPPXXXGPXXPPPXPPXXP 565
PPP P P P PPP PP P G PPP P
Sbjct: 248 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 307
Query: 564 XXPXXXGXAPHNXXPPXPPPXXXXFXXXKXXXPPPP 457
H PPP PPPP
Sbjct: 308 GEHMPPPPMHHEPGEHMPPP--PMHHEPGEHMPPPP 341
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 26.6 bits (56), Expect = 7.7
Identities = 20/69 (28%), Positives = 20/69 (28%), Gaps = 2/69 (2%)
Frame = -3
Query: 708 PPXXXPPPXXPXXXXXXRGXPPPXXX--PPXPPPXXXGPXXPPPXPPXXPXXPXXXGXAP 535
PP PP P P PP PP P P P P P G P
Sbjct: 494 PPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVPAMPG-IP 552
Query: 534 HNXXPPXPP 508
PP P
Sbjct: 553 GATAPPGAP 561
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.310 0.158 0.530
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,831,534
Number of Sequences: 5004
Number of extensions: 28251
Number of successful extensions: 448
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 161
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 725319970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
- SilkBase 1999-2023 -