Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_I16
         (996 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067944-3|AAC17674.2|  347|Caenorhabditis elegans Seven tm rece...    31   1.3  
Z95559-4|CAB09004.1|  110|Caenorhabditis elegans Hypothetical pr...    28   9.0  

>AF067944-3|AAC17674.2|  347|Caenorhabditis elegans Seven tm
           receptor protein 224 protein.
          Length = 347

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +1

Query: 622 KKLGAWXIWLWXXPPLWXAAAXVDXG 699
           KK   W IWLW   P W A   +  G
Sbjct: 127 KKFEGWKIWLWFSIPFWYALTWICTG 152


>Z95559-4|CAB09004.1|  110|Caenorhabditis elegans Hypothetical
           protein Y41E3.8 protein.
          Length = 110

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 13/53 (24%), Positives = 23/53 (43%)
 Frame = +2

Query: 431 MVYVTGDGTIVEKSPFSFMGWFWALLNFFSLLFHTLIDSNYNKHGKKYTRDFR 589
           MVY+  DG ++EK     +        F  L F +L+      +    ++D+R
Sbjct: 1   MVYIDKDGNVLEKKQKGIVEMIVGFFTFIMLFFRSLLGFTSPTNRNSNSQDYR 53


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,207,488
Number of Sequences: 27780
Number of extensions: 242702
Number of successful extensions: 494
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 489
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2605097262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)