Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_I15
(1051 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1200 + 26937624-26937674,26937913-26938005,26938582-269387... 325 4e-89
08_02_1441 - 27116242-27116354,27116646-27116742,27116841-271170... 320 2e-87
05_03_0633 + 16416913-16417009,16417976-16418060,16418398-164185... 40 3e-06
02_05_0835 - 32099966-32100111,32100418-32100465,32100673-321007... 41 0.002
04_04_1111 - 30979334-30979479,30979769-30979866,30980364-309804... 33 0.50
11_05_0099 - 19044772-19044837,19044896-19045051,19045529-190456... 31 1.5
07_03_0151 - 14465479-14465675,14466280-14466401,14466934-144670... 30 2.7
09_02_0012 + 2965797-2966714,2966756-2967011,2967051-2967147,296... 29 6.2
07_03_0551 + 19374405-19374541,19375201-19375435,19375539-193757... 29 6.2
>12_02_1200 +
26937624-26937674,26937913-26938005,26938582-26938728,
26940299-26940379,26940711-26940849,26940977-26941013,
26941095-26941202,26941434-26941533,26941638-26941783,
26941862-26941953,26942086-26942180,26942435-26942531,
26942623-26942766,26942912-26943129,26943213-26943323
Length = 552
Score = 325 bits (798), Expect = 4e-89
Identities = 143/218 (65%), Positives = 182/218 (83%)
Frame = +2
Query: 86 RFTSEEKRALDRLHKDIYQEIRHAAEAHRQTRKHIRNWIKPGMTMIDICEELEKTARRLI 265
R TSEEKR L+RL K +Y +R AAE HRQ RKH+R+ +KPGM MID+CE LE R+LI
Sbjct: 223 RTTSEEKRELERLQKPMYNAVRRAAEVHRQVRKHMRSILKPGMLMIDLCETLENMVRKLI 282
Query: 266 GEDGLKAGLAFPTGCSRNHCAAHYTPNTGDTTVLEYDDVVKIDFGTHINGRIIDCAFTLH 445
E+GL+AG+AFPTGCS N AAH+TPN+GD TVL+YDDV+K+DFGTHI+G I+DCAFT+
Sbjct: 283 KENGLQAGIAFPTGCSLNWVAAHWTPNSGDKTVLQYDDVMKLDFGTHIDGYIVDCAFTVA 342
Query: 446 FNPRYDPLVKGVQEATEAGIKASGVDVRLCDVGAAVQEVMESHEVELDGQMYQVKPIRNL 625
FNP +D L++ ++AT G+K +G+D RLCDVGAA+QEVMES+EVE++G+++Q+K +RNL
Sbjct: 343 FNPMFDSLLQASKDATNTGVKEAGIDARLCDVGAAIQEVMESYEVEINGKVFQIKSVRNL 402
Query: 626 NGHSIEPYKIHAGKTVPIVKGGETTRMEEXEIYAIXTF 739
NGHSI PY+IHAGK+VPIVKGGE T+MEE E YAI TF
Sbjct: 403 NGHSIGPYQIHAGKSVPIVKGGEQTKMEEGEFYAIETF 440
>08_02_1441 -
27116242-27116354,27116646-27116742,27116841-27117058,
27117279-27117422,27117512-27117608,27117932-27118026,
27118140-27118231,27118326-27118471,27118565-27118664,
27118857-27118964,27119040-27119085,27119210-27119345,
27119847-27120044
Length = 529
Score = 320 bits (785), Expect = 2e-87
Identities = 142/218 (65%), Positives = 180/218 (82%)
Frame = +2
Query: 86 RFTSEEKRALDRLHKDIYQEIRHAAEAHRQTRKHIRNWIKPGMTMIDICEELEKTARRLI 265
R TSEEKR L+RL K +Y +R AAE HRQ RK++R+ +KPGM MID+CE LE R+LI
Sbjct: 167 RTTSEEKRELERLQKPMYNAVRRAAEVHRQVRKYMRSILKPGMLMIDLCETLENMVRKLI 226
Query: 266 GEDGLKAGLAFPTGCSRNHCAAHYTPNTGDTTVLEYDDVVKIDFGTHINGRIIDCAFTLH 445
E+GL+AG+AFPTGCS N AAH+TPN GD TVL+YDDV+K+DFGTHING I+D AFT+
Sbjct: 227 KENGLEAGIAFPTGCSLNCVAAHWTPNGGDKTVLQYDDVMKLDFGTHINGYIVDSAFTVA 286
Query: 446 FNPRYDPLVKGVQEATEAGIKASGVDVRLCDVGAAVQEVMESHEVELDGQMYQVKPIRNL 625
FNP +DPL++ ++AT AG+K +G+D RLCDVGAA+QEVMES+EVE++G+++QVK +RNL
Sbjct: 287 FNPMFDPLLQASRDATNAGVKEAGIDARLCDVGAAIQEVMESYEVEINGKVFQVKSVRNL 346
Query: 626 NGHSIEPYKIHAGKTVPIVKGGETTRMEEXEIYAIXTF 739
NGH I PY+IH GK+VP+VKGGE T+MEE E YAI TF
Sbjct: 347 NGHGIGPYQIHFGKSVPVVKGGEQTKMEEGEFYAIETF 384
Score = 29.1 bits (62), Expect = 6.2
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 738 FGSTGRGQVHXDXDWSXYXKKF 803
FGSTG+G V D + S Y K F
Sbjct: 384 FGSTGKGYVREDLECSHYMKNF 405
>05_03_0633 +
16416913-16417009,16417976-16418060,16418398-16418551,
16418808-16419023,16419105-16419241,16419317-16419408,
16419622-16419804,16421722-16421819,16422021-16422070,
16424605-16424756,16424944-16425069,16426315-16426523
Length = 532
Score = 40.3 bits (90), Expect(2) = 3e-06
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 5/124 (4%)
Frame = +2
Query: 374 DDVVKIDFGTHINGRIIDCAFTLHFNPRYDPLVKG-VQEATEAGIKASGVDVRLCDVGAA 550
D ++ D G HI+G I A H + +D V G + A A+ V +RL G
Sbjct: 56 DSYIRDDMGCHIDGFI---AVVAHTHVIHDGAVTGKAADVLAAANTAAEVALRLVRPGKK 112
Query: 551 VQEVMESHEVELDGQMYQVKPIRNLNGHSIEPYKIHAGKTVPIVKGGET----TRMEEXE 718
++V E+ ++ Y K + + H ++ + I K V V +T EE E
Sbjct: 113 NKDVTEA--IQKVAAAYDCKIVEGVLSHQLKQFVIDGNKVVLSVSNADTKVDDAEFEENE 170
Query: 719 IYAI 730
+YAI
Sbjct: 171 VYAI 174
Score = 29.1 bits (62), Expect(2) = 3e-06
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +2
Query: 101 EKRALDRLHKDIYQEIRHAAEAHRQTRKHIRNWIKPGMTMIDICEELEKTARRLIG 268
E++ LD D+ + + AA+ K + + KP ++DICE+ + R +G
Sbjct: 9 EEKELDLSSSDVVTKYKDAADIINNALKLVVSLCKPKAKIVDICEKGDSYIRDDMG 64
>02_05_0835 -
32099966-32100111,32100418-32100465,32100673-32100770,
32101269-32101348,32101615-32101686,32102260-32102301,
32102382-32102543,32102971-32103199,32103681-32103747,
32103907-32104003
Length = 346
Score = 40.7 bits (91), Expect = 0.002
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 6/201 (2%)
Frame = +2
Query: 146 IRHAAEAHRQTRKHIRNWIKPGMTMIDICEELEKTARRLIGEDGLKAG----LAFPTG-C 310
+R + + Q K ++PG+T +E++K ++I ++G FP C
Sbjct: 112 MRASGKLAAQVLKFAGTLVEPGITT----DEIDKAVHQMIVDNGAYPSPLGYCGFPKSVC 167
Query: 311 -SRNHCAAHYTPNTGDTTVLEYDDVVKIDFGTHINGRIIDCAFTLHFNPRYDPLVKGVQE 487
S N C H P D+ LE D++ ID ++NG D + T D K VQ
Sbjct: 168 TSVNECICHGIP---DSRPLEDGDIINIDVTVYLNGYHGDTSATFLCGNVDDKAKKLVQV 224
Query: 488 ATEAGIKASGVDVRLCDVGAAVQEVMESHEVELDGQMYQVKPIRNLNGHSIEPYKIHAGK 667
E KA + +C G ++ + + + D + V +R GH + HA
Sbjct: 225 TRECLDKA----ISICAPGVEIKRIGRTIQDHADKFKFGV--VRQFVGHGVGQV-FHAEP 277
Query: 668 TVPIVKGGETTRMEEXEIYAI 730
V + E RM + + I
Sbjct: 278 VVLHFRNNEWGRMTLNQTFTI 298
>04_04_1111 -
30979334-30979479,30979769-30979866,30980364-30980443,
30980685-30980756,30980860-30980901,30981009-30981170,
30981276-30981427,30981453-30981538,30981654-30981726,
30982706-30982889
Length = 364
Score = 32.7 bits (71), Expect = 0.50
Identities = 37/152 (24%), Positives = 61/152 (40%), Gaps = 9/152 (5%)
Frame = +2
Query: 146 IRHAAEAHRQTRKHIRNWIKPGMTMIDICEELEKTARRLIGEDGLKAGL----AFPTG-C 310
++ A E + ++ +KP +T +E++K ++I + G FP C
Sbjct: 146 MKAACELAARVLEYAGTLVKPSVTT----DEIDKAVHKMIIDAGAYPSPLGYGGFPKSVC 201
Query: 311 -SRNHCAAHYTPNTGDTTVLEYDDVVKIDFGTHINGRIIDCAFTL---HFNPRYDPLVKG 478
S N C H P D+ L+ D++ ID ++NG D + T + LVK
Sbjct: 202 TSVNECICHGIP---DSRELQDGDIINIDVTVYLNGYHGDTSKTFLCGEVDEASKRLVKV 258
Query: 479 VQEATEAGIKASGVDVRLCDVGAAVQEVMESH 574
+E I A L +G + E E H
Sbjct: 259 TEECMLRAISACKHGTSLKKIGRRISEHAERH 290
>11_05_0099 -
19044772-19044837,19044896-19045051,19045529-19045653,
19045773-19045844,19045947-19046051,19046509-19046563,
19047334-19047414,19047499-19047633,19048279-19048342,
19048844-19048911,19049082-19049168,19050247-19050501,
19050616-19050738,19050866-19051150,19051712-19051851,
19052385-19052445,19052537-19052637,19052807-19052870,
19053020-19053127
Length = 716
Score = 31.1 bits (67), Expect = 1.5
Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = +2
Query: 287 GLAFPTGCS--RNHCAAHYTPNTGDTTVLEYDDVVKIDFGTHINGRIIDCAFTLHF 448
GL+FPT S N HY+P L+ D + D G D T+HF
Sbjct: 456 GLSFPTISSVGPNAAVIHYSPEASSCAELDADKIYLCDSGAQYLDGTTDITRTVHF 511
>07_03_0151 -
14465479-14465675,14466280-14466401,14466934-14467081,
14467146-14467167,14467299-14467393,14467395-14467438,
14467750-14467841,14467911-14467982,14468188-14468229,
14468333-14468494,14468631-14468683,14468808-14468925,
14468974-14469150,14469573-14469639,14470195-14470273,
14473805-14473862,14474257-14474346,14474429-14474540,
14474649-14474912,14475361-14475463,14476200-14476278,
14476748-14476852
Length = 766
Score = 30.3 bits (65), Expect = 2.7
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Frame = +2
Query: 143 EIRHAA-EAHRQTRKHIRNWIKPGMTMIDICEELEKTARRLIGEDGLKAGL----AFPTG 307
E RHAA E + ++ +KP T +E+++ ++I + G FP
Sbjct: 414 EARHAACELTARVLEYAGTLVKPLATT----DEIDRAVHQMIIDAGAYPSPLGYGGFPKS 469
Query: 308 -C-SRNHCAAHYTPNTGDTTVLEYDDVVKIDFGTHING 415
C S N C H P D+ VL+ D++ ID ++NG
Sbjct: 470 VCTSVNECICHGIP---DSRVLQNGDIINIDVTVYLNG 504
>09_02_0012 +
2965797-2966714,2966756-2967011,2967051-2967147,
2967175-2967634,2967804-2968117,2968220-2968235
Length = 686
Score = 29.1 bits (62), Expect = 6.2
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +2
Query: 503 IKASGVDVRLCDVGAAVQEVMESHEVELDGQMYQVKPIRNLNGHSIEPYKIHAGKTVPI 679
I+A +D LCD+GA+V V + +L+ + KP+R S Y + VP+
Sbjct: 507 IRAQQLDQALCDLGASVSVVPKDVFDKLNFTVLAPKPMRLQLADSSVCYPARIAEDVPV 565
>07_03_0551 +
19374405-19374541,19375201-19375435,19375539-19375700,
19375778-19375819,19375941-19376012,19376291-19376370,
19376962-19377059,19377691-19377738,19377983-19378083,
19378331-19378426,19378599-19378689,19379510-19379706,
19380918-19381004,19381208-19381488,19381653-19381743
Length = 605
Score = 29.1 bits (62), Expect = 6.2
Identities = 30/126 (23%), Positives = 47/126 (37%), Gaps = 5/126 (3%)
Frame = +2
Query: 200 IKPGMTMIDICEELEKTARRLIGEDGLKAGLAFPTG-C-SRNHCAAHYTPNTGDTTVLEY 373
IKP +T +I E+ FP C S N C H P D+T L+
Sbjct: 123 IKPSVTTNEIDREVHNMIIEAGAYPSQLGYGGFPKSICTSLNECVCHGVP---DSTQLQT 179
Query: 374 DDVVKIDFGTHINGRIIDCAFTLHFNPRYDPL---VKGVQEATEAGIKASGVDVRLCDVG 544
D++ +D +NG + T D + +K +E E GI V +G
Sbjct: 180 GDIMNVDVNVFLNGYHGGASRTFVCGEVDDSIRHFLKAAEECLEKGITVCRDGVNYKKIG 239
Query: 545 AAVQEV 562
+ ++
Sbjct: 240 KKISKL 245
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,714,574
Number of Sequences: 37544
Number of extensions: 591178
Number of successful extensions: 1520
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1490
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3106134136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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