Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_I15
(1051 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117205-8|CAB55167.1| 444|Caenorhabditis elegans Hypothetical ... 354 5e-98
Z68134-2|CAA92223.1| 182|Caenorhabditis elegans Hypothetical pr... 73 3e-13
Z81086-5|CAB03119.2| 182|Caenorhabditis elegans Hypothetical pr... 70 3e-12
AC006696-3|AAF39984.1| 391|Caenorhabditis elegans Hypothetical ... 69 6e-12
Z81029-3|CAB02699.2| 207|Caenorhabditis elegans Hypothetical pr... 31 1.4
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.8
AF043701-7|AAK18972.1| 498|Caenorhabditis elegans Hypothetical ... 29 4.2
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 29 5.5
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 29 5.5
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 5.5
Z79605-4|CAB01902.2| 557|Caenorhabditis elegans Hypothetical pr... 29 7.3
U61236-1|AAB17541.1| 557|Caenorhabditis elegans M75 protein. 29 7.3
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr... 28 9.7
AF016676-9|AAG24107.1| 394|Caenorhabditis elegans Hypothetical ... 28 9.7
>AL117205-8|CAB55167.1| 444|Caenorhabditis elegans Hypothetical
protein Y116A8A.9 protein.
Length = 444
Score = 354 bits (871), Expect = 5e-98
Identities = 159/228 (69%), Positives = 193/228 (84%)
Frame = +2
Query: 56 EGLDEXTAKNRFTSEEKRALDRLHKDIYQEIRHAAEAHRQTRKHIRNWIKPGMTMIDICE 235
+G D A +R ++EEK+ALD +++++Q+ R +AEAHRQ RK++++WIKPGMTMI+ICE
Sbjct: 103 KGKDGRVATDRESNEEKKALDISYEEVWQDYRRSAEAHRQVRKYVKSWIKPGMTMIEICE 162
Query: 236 ELEKTARRLIGEDGLKAGLAFPTGCSRNHCAAHYTPNTGDTTVLEYDDVVKIDFGTHING 415
LE T+RRLI E GL+AGLAFPTGCS NHCAAHYTPN GDTTVL+Y DV KID+G H+ G
Sbjct: 163 RLETTSRRLIKEQGLEAGLAFPTGCSLNHCAAHYTPNAGDTTVLQYGDVCKIDYGIHVRG 222
Query: 416 RIIDCAFTLHFNPRYDPLVKGVQEATEAGIKASGVDVRLCDVGAAVQEVMESHEVELDGQ 595
R+ID AFT+HF+P++DPLV+ V+EAT AGIK SG+DVRLCDVG V+EVM SHEVELDG+
Sbjct: 223 RLIDSAFTVHFDPKFDPLVEAVREATNAGIKESGIDVRLCDVGEIVEEVMTSHEVELDGK 282
Query: 596 MYQVKPIRNLNGHSIEPYKIHAGKTVPIVKGGETTRMEEXEIYAIXTF 739
Y VKPIRNLNGHSI Y+IHAGKTVPIVKGGE T+MEE EIYAI TF
Sbjct: 283 SYVVKPIRNLNGHSIAQYRIHAGKTVPIVKGGEQTKMEENEIYAIETF 330
Score = 32.3 bits (70), Expect = 0.59
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 738 FGSTGRGQVHXDXDWSXYXKKF 803
FGSTG+G VH D + S Y K F
Sbjct: 330 FGSTGKGYVHDDMETSHYMKNF 351
>Z68134-2|CAA92223.1| 182|Caenorhabditis elegans Hypothetical
protein T27A8.3 protein.
Length = 182
Score = 72.9 bits (171), Expect = 3e-13
Identities = 35/53 (66%), Positives = 38/53 (71%)
Frame = +2
Query: 581 ELDGQMYQVKPIRNLNGHSIEPYKIHAGKTVPIVKGGETTRMEEXEIYAIXTF 739
E G +VKPI +LNG SI +IH GKTVPIVKGGE RMEE EIYAI TF
Sbjct: 29 EFHGNSNEVKPIGSLNGQSIAQCRIHTGKTVPIVKGGEQARMEENEIYAIETF 81
Score = 30.3 bits (65), Expect = 2.4
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 738 FGSTGRGQVHXDXDWSXYXKKF 803
FGSTG+G H D + S Y K F
Sbjct: 81 FGSTGKGYFHDDMETSHYMKNF 102
>Z81086-5|CAB03119.2| 182|Caenorhabditis elegans Hypothetical
protein F53B6.5 protein.
Length = 182
Score = 69.7 bits (163), Expect = 3e-12
Identities = 34/53 (64%), Positives = 37/53 (69%)
Frame = +2
Query: 581 ELDGQMYQVKPIRNLNGHSIEPYKIHAGKTVPIVKGGETTRMEEXEIYAIXTF 739
E G +VKPI +LNG SI +IH KTVPIVKGGE RMEE EIYAI TF
Sbjct: 29 EFHGNSNEVKPIGSLNGQSIAQCRIHTEKTVPIVKGGEQARMEENEIYAIETF 81
Score = 30.3 bits (65), Expect = 2.4
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 738 FGSTGRGQVHXDXDWSXYXKKF 803
FGSTG+G H D + S Y K F
Sbjct: 81 FGSTGKGYFHDDMETSHYMKNF 102
>AC006696-3|AAF39984.1| 391|Caenorhabditis elegans Hypothetical
protein W08E12.7 protein.
Length = 391
Score = 68.9 bits (161), Expect = 6e-12
Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 6/195 (3%)
Frame = +2
Query: 155 AAEAHRQTRKHIRNWIKPGMTMIDICEE-----LEKTARRLIGEDGLKAGLAFPTGCSRN 319
AAE K + IK G D+C+ LEKT + E G+A PT S +
Sbjct: 35 AAEITNAVLKEVLANIKEGAIAGDLCDLGDKLILEKTGKLYKKEKNFTKGIAMPTCISID 94
Query: 320 HCAAHYTPNTGDT-TVLEYDDVVKIDFGTHINGRIIDCAFTLHFNPRYDPLVKGVQEATE 496
+C HYTP + VL+ VVK+D GTHI+G I A T+ D V G
Sbjct: 95 NCICHYTPLKSEAPVVLKNGQVVKVDLGTHIDGLIATAAHTVVVGASKDNKVTGKLADLL 154
Query: 497 AGIKASGVDVRLCDVGAAVQEVMESHEVELDGQMYQVKPIRNLNGHSIEPYKIHAGKTVP 676
G +++ + + + + ++ + + PI N+ H +E +I K +
Sbjct: 155 RGTH-DALEIAIRSLRPDTENTTITKNIDKTAAEFGLTPIENMLSHQLERNEIDGEKKI- 212
Query: 677 IVKGGETTRMEEXEI 721
I GE + E +I
Sbjct: 213 IQNSGEKQKGEIEKI 227
>Z81029-3|CAB02699.2| 207|Caenorhabditis elegans Hypothetical
protein C01A2.4 protein.
Length = 207
Score = 31.1 bits (67), Expect = 1.4
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +2
Query: 23 NSYXFPDHXPAEGLD--EXTAKNRFTSEEKRALDRLHKDIYQEIRH-AAEAHRQTRKHI 190
N + PD E + E NR ++R +DR K++ QEI+ AA+ H +H+
Sbjct: 2 NIFSKPDPKELERANKRELRKTNRDLESDRRQMDRREKELEQEIKKLAAKGHNDAARHL 60
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +1
Query: 877 GXPPXXXXPXVXXPPGALXXXXXXPXXXPXXKXGGGGXPXPXPLXXXXXGGXXP 1038
G PP P PPG L P P GG P P P GG P
Sbjct: 734 GLPPITGGPPPPPPPGGLPPISGGP-PPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +1
Query: 877 GXPPXXXXPXVXXPPGALXXXXXXPXXXPXXKXGGGGXPXPXPLXXXXXGGXXP 1038
G PP P PPG L P P GG P P P GG P
Sbjct: 734 GLPPITGGPPPPPPPGGLPPISGGP-PPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +1
Query: 877 GXPPXXXXPXVXXPPGALXXXXXXPXXXPXXKXGGGGXPXPXPLXXXXXGGXXP 1038
G PP P PPG L P P GG P P P GG P
Sbjct: 317 GLPPITGGPPPPPPPGGLPPISGGP-PPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
>AF043701-7|AAK18972.1| 498|Caenorhabditis elegans Hypothetical
protein K12C11.1 protein.
Length = 498
Score = 29.5 bits (63), Expect = 4.2
Identities = 37/145 (25%), Positives = 55/145 (37%), Gaps = 5/145 (3%)
Frame = +2
Query: 155 AAEAHRQTRKHIRNWIKPGMTMIDICEELEKTARRLIGEDGLKAGLAFPTGCSRNHCAAH 334
A+EAHR KH+R PG+ + T+ G L TGC N H
Sbjct: 199 ASEAHRAAMKHMR----PGLYEYQLESLFRHTSYYHGGCRHLAYTCIAATGC--NGSVLH 252
Query: 335 Y-TPNTGDTTVLEYDDVVKIDFGTHINGRIIDCAFTLHFNPRYDPLVKGVQEATEAG--- 502
Y N + ++ D+ D G N D + N ++ K V A A
Sbjct: 253 YGHANAPNDKFIKDGDMCLFDMGPEYNCYASDITTSFPSNGKFTEKQKIVYNAVLAANLA 312
Query: 503 -IKASGVDVRLCDVGAAVQEVMESH 574
+KA+ VR D+ ++V+ H
Sbjct: 313 VLKAAKPGVRWTDMHILSEKVILEH 337
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = +2
Query: 248 TARRLIGEDGLKAGLAFPTGCSRNHCAAH 334
TAR+L E GLK GLAF G SRN H
Sbjct: 833 TARQLTYETGLKCGLAF-GGYSRNANVQH 860
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = +2
Query: 248 TARRLIGEDGLKAGLAFPTGCSRNHCAAH 334
TAR+L E GLK GLAF G SRN H
Sbjct: 833 TARQLTYETGLKCGLAF-GGYSRNANVQH 860
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 1027 PPXXFXXGGXGXXXPPPPXFXKGXFXGP 944
PP F G G PPPP F + GP
Sbjct: 783 PPPSFRGGRGGHGGPPPPHFDRRGGGGP 810
>Z79605-4|CAB01902.2| 557|Caenorhabditis elegans Hypothetical
protein ZK678.5 protein.
Length = 557
Score = 28.7 bits (61), Expect = 7.3
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -1
Query: 985 PPPPXFXKGXFXGPXGXXKGPXGGXQPXXXXKXGGXP 875
PPPP +G F P G P GG QP G P
Sbjct: 278 PPPPPGQQGGFVQPQGFQ--PQGGFQPQGFQPQGFQP 312
>U61236-1|AAB17541.1| 557|Caenorhabditis elegans M75 protein.
Length = 557
Score = 28.7 bits (61), Expect = 7.3
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -1
Query: 985 PPPPXFXKGXFXGPXGXXKGPXGGXQPXXXXKXGGXP 875
PPPP +G F P G P GG QP G P
Sbjct: 278 PPPPPGQQGGFVQPQGFQ--PQGGFQPQGFQPQGFQP 312
>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
protein H05G16.1 protein.
Length = 1111
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 86 RFTSEEKRALDRLHKDIYQEIRHAAEAHRQTRKHIRNWIK 205
+ + + K+ L +LH D YQ ++ E +TR +N+ K
Sbjct: 277 KLSFKRKKLLVKLHPDSYQYLKETVEFSFETRDECKNFWK 316
>AF016676-9|AAG24107.1| 394|Caenorhabditis elegans Hypothetical
protein F41B5.10 protein.
Length = 394
Score = 28.3 bits (60), Expect = 9.7
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 564 WSHMKLNSTGRCTR*NQ-SVILMDIQLNLIKSTPVRQSR**KVARQRAWRRXK 719
W LN+T T N+ +V+ +D+QL ++K+ R K+A+ RR K
Sbjct: 184 WEQKILNTTDWLTNFNEFNVLPLDVQLKIVKTIWQVYGRFEKIAKTAELRRKK 236
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,695,546
Number of Sequences: 27780
Number of extensions: 467252
Number of successful extensions: 1337
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1282
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2793417546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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