Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_I12
         (1203 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0229 + 21093398-21094423                                         89   6e-18
07_03_0932 + 22726529-22727338,22729097-22729462,22729841-22730026     31   2.4  
01_01_0449 + 3335408-3335479,3336310-3336389,3336911-3336989,333...    31   2.4  

>02_04_0229 + 21093398-21094423
          Length = 341

 Score = 89.0 bits (211), Expect = 6e-18
 Identities = 46/142 (32%), Positives = 71/142 (50%)
 Frame = +1

Query: 433 DVALRNLKNCTIGLKGLMGTLHLINLENCIVLSGPVTSSVFVDKCTNCKIVIACQQLRMH 612
           D  L +L +C + LKG    LH+  L++C V  G V  SV ++    C  V+A  Q+R+H
Sbjct: 190 DFTLADLVSCQVYLKGKCRALHVHKLKDCRVFVGAVFGSVLIEDVERCAFVMAAHQIRIH 249

Query: 613 TSTKCDVYLHVTSKGIVEDCSQIRTAPYNLFYDNLEKHYESSSLDRXXXXXXXXXXXXXX 792
            +T  D YL V S+ I+EDC  +R AP+ L Y+ + +    + L+               
Sbjct: 250 EATATDFYLRVRSRPIIEDCCGVRFAPHALKYEGIGEDLRDAGLEEETGNWANVDDFKWL 309

Query: 793 APDVSSPNWSVLDVSERIDSWD 858
              V SPNW ++   ER+ + D
Sbjct: 310 RA-VQSPNWCLVPEEERLQTID 330


>07_03_0932 + 22726529-22727338,22729097-22729462,22729841-22730026
          Length = 453

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 17/62 (27%), Positives = 33/62 (53%)
 Frame = -2

Query: 923 CTDILIYCYIHNXYKGILDHQSSHESILSETSKTDQFGELTSGANQLKSSKLSQLFEFLS 744
           C  +++  YI   ++ ++D+++   SI  ETSK  Q G LTS    + S ++ +    + 
Sbjct: 334 CVPVIVSDYIELPFEDVIDYRNI--SIFVETSKAVQPGFLTSTLRGISSQRILEYQREIK 391

Query: 743 KL 738
           K+
Sbjct: 392 KV 393


>01_01_0449 +
           3335408-3335479,3336310-3336389,3336911-3336989,
           3337342-3337423,3337820-3337976,3338660-3338717,
           3338718-3338828,3339211-3339257,3339820-3339948,
           3340750-3340834,3341264-3341344,3341881-3341886
          Length = 328

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 14/52 (26%), Positives = 27/52 (51%)
 Frame = +1

Query: 82  SMLPSHFDIIKKEINELQKYVVTSTFFLKEFNLRKFLGIVQNLQTKCYELED 237
           S++P  F  ++ +   +Q     S+ F++  + +KF  ++ N   KCY  ED
Sbjct: 168 SLMPLWFAKVRVDCRWMQDMTKVSSHFVRGNDPKKFASMLANFMGKCYPGED 219


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,984,492
Number of Sequences: 37544
Number of extensions: 442261
Number of successful extensions: 938
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3678130032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)