Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_I12
         (1203 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058646-1|AAL13875.1|  355|Drosophila melanogaster LD34582p pro...   130   3e-30
AE014134-703|AAN11168.1|  355|Drosophila melanogaster CG31961-PB...   130   3e-30
AE014134-702|AAN11167.1|  355|Drosophila melanogaster CG31961-PA...   130   3e-30

>AY058646-1|AAL13875.1|  355|Drosophila melanogaster LD34582p
           protein.
          Length = 355

 Score =  130 bits (315), Expect = 3e-30
 Identities = 72/248 (29%), Positives = 111/248 (44%), Gaps = 1/248 (0%)
 Frame = +1

Query: 88  LPSHFDIIKKEINELQKYVVTSTFFLKEFNLRKFLGIVQNLQTKCYELEDRYVPRXXXXX 267
           L  +F  I  EI +LQ+Y+  ST FL +F ++    I+  L     E   R +P+     
Sbjct: 75  LARNFADITVEIQDLQRYLTASTMFLPDFKIKSCQNILNTLTAVSDETRQRLLPKKKFGF 134

Query: 268 XXXXXXXXHSQKQNLMDEADGAAKKDSNKWDENL-FGFSSKXXXXXXXXXXXXYRRDVAL 444
                        N  D  D    K   K   N  +  +++              +D+ +
Sbjct: 135 SGKKTVTKPKVPPN-KDIVDAKLSKVPEKLGSNFTWTIANRTNEHIVLDSAKVNGQDITI 193

Query: 445 RNLKNCTIGLKGLMGTLHLINLENCIVLSGPVTSSVFVDKCTNCKIVIACQQLRMHTSTK 624
             L +C + L+G  G++ +     C +L GP+  S F +   +C + IACQQLR+H+S  
Sbjct: 194 SKLNHCLVELQGHPGSVQVSRASKCTLLCGPIARSFFAENLEDCTLSIACQQLRLHSSRS 253

Query: 625 CDVYLHVTSKGIVEDCSQIRTAPYNLFYDNLEKHYESSSLDRXXXXXXXXXXXXXXAPDV 804
             +Y+HVT + I+EDC  I    YN  Y  LE  Y +S L++              +PDV
Sbjct: 254 IRIYMHVTCRAIIEDCKSIEIGEYNYDYSKLEADYLASGLNKAQNNYTDVADFNWLSPDV 313

Query: 805 SSPNWSVL 828
            SPNWS+L
Sbjct: 314 PSPNWSLL 321


>AE014134-703|AAN11168.1|  355|Drosophila melanogaster CG31961-PB,
           isoform B protein.
          Length = 355

 Score =  130 bits (315), Expect = 3e-30
 Identities = 72/248 (29%), Positives = 111/248 (44%), Gaps = 1/248 (0%)
 Frame = +1

Query: 88  LPSHFDIIKKEINELQKYVVTSTFFLKEFNLRKFLGIVQNLQTKCYELEDRYVPRXXXXX 267
           L  +F  I  EI +LQ+Y+  ST FL +F ++    I+  L     E   R +P+     
Sbjct: 75  LARNFADITVEIQDLQRYLTASTMFLPDFKIKSCQNILNTLTAVSDETRQRLLPKKKFGF 134

Query: 268 XXXXXXXXHSQKQNLMDEADGAAKKDSNKWDENL-FGFSSKXXXXXXXXXXXXYRRDVAL 444
                        N  D  D    K   K   N  +  +++              +D+ +
Sbjct: 135 SGKKTVTKPKVPPN-KDIVDAKLSKVPEKLGSNFTWTIANRTNEHIVLDSAKVNGQDITI 193

Query: 445 RNLKNCTIGLKGLMGTLHLINLENCIVLSGPVTSSVFVDKCTNCKIVIACQQLRMHTSTK 624
             L +C + L+G  G++ +     C +L GP+  S F +   +C + IACQQLR+H+S  
Sbjct: 194 SKLNHCLVELQGHPGSVQVSRASKCTLLCGPIARSFFAENLEDCTLSIACQQLRLHSSRS 253

Query: 625 CDVYLHVTSKGIVEDCSQIRTAPYNLFYDNLEKHYESSSLDRXXXXXXXXXXXXXXAPDV 804
             +Y+HVT + I+EDC  I    YN  Y  LE  Y +S L++              +PDV
Sbjct: 254 IRIYMHVTCRAIIEDCKSIEIGEYNYDYSKLEADYLASGLNKAQNNYTDVADFNWLSPDV 313

Query: 805 SSPNWSVL 828
            SPNWS+L
Sbjct: 314 PSPNWSLL 321


>AE014134-702|AAN11167.1|  355|Drosophila melanogaster CG31961-PA,
           isoform A protein.
          Length = 355

 Score =  130 bits (315), Expect = 3e-30
 Identities = 72/248 (29%), Positives = 111/248 (44%), Gaps = 1/248 (0%)
 Frame = +1

Query: 88  LPSHFDIIKKEINELQKYVVTSTFFLKEFNLRKFLGIVQNLQTKCYELEDRYVPRXXXXX 267
           L  +F  I  EI +LQ+Y+  ST FL +F ++    I+  L     E   R +P+     
Sbjct: 75  LARNFADITVEIQDLQRYLTASTMFLPDFKIKSCQNILNTLTAVSDETRQRLLPKKKFGF 134

Query: 268 XXXXXXXXHSQKQNLMDEADGAAKKDSNKWDENL-FGFSSKXXXXXXXXXXXXYRRDVAL 444
                        N  D  D    K   K   N  +  +++              +D+ +
Sbjct: 135 SGKKTVTKPKVPPN-KDIVDAKLSKVPEKLGSNFTWTIANRTNEHIVLDSAKVNGQDITI 193

Query: 445 RNLKNCTIGLKGLMGTLHLINLENCIVLSGPVTSSVFVDKCTNCKIVIACQQLRMHTSTK 624
             L +C + L+G  G++ +     C +L GP+  S F +   +C + IACQQLR+H+S  
Sbjct: 194 SKLNHCLVELQGHPGSVQVSRASKCTLLCGPIARSFFAENLEDCTLSIACQQLRLHSSRS 253

Query: 625 CDVYLHVTSKGIVEDCSQIRTAPYNLFYDNLEKHYESSSLDRXXXXXXXXXXXXXXAPDV 804
             +Y+HVT + I+EDC  I    YN  Y  LE  Y +S L++              +PDV
Sbjct: 254 IRIYMHVTCRAIIEDCKSIEIGEYNYDYSKLEADYLASGLNKAQNNYTDVADFNWLSPDV 313

Query: 805 SSPNWSVL 828
            SPNWS+L
Sbjct: 314 PSPNWSLL 321


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,085,703
Number of Sequences: 53049
Number of extensions: 831908
Number of successful extensions: 1774
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1774
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6376781865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)