Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_I07
(1235 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 275 5e-74
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 275 5e-74
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 136 4e-32
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 136 4e-32
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 128 6e-30
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 128 8e-30
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 119 5e-27
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 113 2e-25
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 113 2e-25
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 113 2e-25
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 96 4e-20
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 90 3e-18
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 83 3e-16
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 83 5e-16
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 79 6e-15
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 75 8e-14
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 75 1e-13
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 74 2e-13
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 73 4e-13
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 69 9e-12
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 61 2e-09
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 57 3e-08
Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical pr... 51 1e-06
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 46 7e-05
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 42 0.001
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 41 0.002
AL132952-10|CAB63384.1| 591|Caenorhabditis elegans Hypothetical... 31 2.2
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 30 3.9
Z34802-3|CAA84333.1| 354|Caenorhabditis elegans Hypothetical pr... 29 9.0
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 275 bits (674), Expect = 5e-74
Identities = 120/151 (79%), Positives = 140/151 (92%)
Frame = +3
Query: 228 MSTPAXXRLMRDFKRLQXDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 407
M+TP+ RLMRDFK+LQ DPP GVSGAPT++NI+ W A+IFGP +TPFEDGTFKL++EFT
Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFT 60
Query: 408 EEYPNKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNS 587
EEYPNKPPTV+F+SKMFHPNVYADG ICLDILQNRWSPTYDV+AILTSIQSLL +PNPNS
Sbjct: 61 EEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNS 120
Query: 588 PANSMAAQLYKENRREYEKRVKACVEQSFID 680
PANS+AAQLY+ENRREYEKRV+ VEQS+++
Sbjct: 121 PANSLAAQLYQENRREYEKRVQQIVEQSWLN 151
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 275 bits (674), Expect = 5e-74
Identities = 120/151 (79%), Positives = 140/151 (92%)
Frame = +3
Query: 228 MSTPAXXRLMRDFKRLQXDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 407
M+TP+ RLMRDFK+LQ DPP GVSGAPT++NI+ W A+IFGP +TPFEDGTFKL++EFT
Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFT 60
Query: 408 EEYPNKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNS 587
EEYPNKPPTV+F+SKMFHPNVYADG ICLDILQNRWSPTYDV+AILTSIQSLL +PNPNS
Sbjct: 61 EEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNS 120
Query: 588 PANSMAAQLYKENRREYEKRVKACVEQSFID 680
PANS+AAQLY+ENRREYEKRV+ VEQS+++
Sbjct: 121 PANSLAAQLYQENRREYEKRVQQIVEQSWLN 151
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 136 bits (328), Expect = 4e-32
Identities = 57/135 (42%), Positives = 86/135 (63%)
Frame = +3
Query: 240 AXXRLMRDFKRLQXDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 419
A R+ ++ + L DPP S P +++ W A I GP ++P++ G F LTI F +YP
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYP 61
Query: 420 NKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANS 599
KPP V F ++++HPN+ ++G ICLDIL+++WSP +S +L SI SLL DPNP+ P
Sbjct: 62 FKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVP 121
Query: 600 MAAQLYKENRREYEK 644
A++YK +R Y +
Sbjct: 122 EIARIYKTDRERYNQ 136
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 136 bits (328), Expect = 4e-32
Identities = 57/135 (42%), Positives = 86/135 (63%)
Frame = +3
Query: 240 AXXRLMRDFKRLQXDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYP 419
A R+ ++ + L DPP S P +++ W A I GP ++P++ G F LTI F +YP
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYP 61
Query: 420 NKPPTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANS 599
KPP V F ++++HPN+ ++G ICLDIL+++WSP +S +L SI SLL DPNP+ P
Sbjct: 62 FKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVP 121
Query: 600 MAAQLYKENRREYEK 644
A++YK +R Y +
Sbjct: 122 EIARIYKTDRERYNQ 136
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 128 bits (310), Expect = 6e-30
Identities = 63/162 (38%), Positives = 93/162 (57%), Gaps = 14/162 (8%)
Frame = +3
Query: 228 MSTPAXXRLMRDFKRLQXDPPTGVSGAPTD-NNIMIWNAVIFGPHDTPFEDGTFKLTIEF 404
M+ A RLM ++K L PP G+ AP D +N W +I GP +T F +G F I F
Sbjct: 1 MAGYALKRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITF 60
Query: 405 TEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL-------------QNRWSPTYDVSAIL 545
++YP PP +RF +FHPN+YADG +C+ IL RWSP + IL
Sbjct: 61 PQDYPLSPPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNERWSPVQSIEKIL 120
Query: 546 TSIQSLLSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQS 671
S+ S+L++PN SPAN AA++++E+R ++EK + V ++
Sbjct: 121 LSVVSMLAEPNDESPANVSAAKMWREDRAQFEKIADSLVRKT 162
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 128 bits (309), Expect = 8e-30
Identities = 58/135 (42%), Positives = 85/135 (62%)
Frame = +3
Query: 249 RLMRDFKRLQXDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKP 428
R++++ +RL DP G+S P ++N ++ +I GP D+PF G FKL + EEYP
Sbjct: 8 RIIKETQRLLADPVPGISANPDESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMAA 67
Query: 429 PTVRFVSKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSMAA 608
P VRF++K++HPN+ G ICLDIL+++WSP + +L SIQ+LLS PNP P + A
Sbjct: 68 PKVRFMTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPEDPLATDVA 127
Query: 609 QLYKENRREYEKRVK 653
+ +K N E K K
Sbjct: 128 EQWKTNEAEAIKTAK 142
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 119 bits (286), Expect = 5e-27
Identities = 58/154 (37%), Positives = 90/154 (58%), Gaps = 14/154 (9%)
Frame = +3
Query: 252 LMRDFKRLQXDPPTGVS-GAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKP 428
L + ++ P G S G DN+I W ++ GP DT +E G FK ++F +YP KP
Sbjct: 8 LKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKP 67
Query: 429 PTVRFVSKMFHPNVYADGGICLDIL-------------QNRWSPTYDVSAILTSIQSLLS 569
P ++F+S+++HPN+ +G +C+ IL + RW P + V IL S+ S+L+
Sbjct: 68 PKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLT 127
Query: 570 DPNPNSPANSMAAQLYKENRREYEKRVKACVEQS 671
DPN SPAN AA++ +EN E++K+V CV +S
Sbjct: 128 DPNFESPANVDAAKMQRENYAEFKKKVAQCVRRS 161
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 113 bits (272), Expect = 2e-25
Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 7/149 (4%)
Frame = +3
Query: 228 MSTPAXXRLMRDFKRLQXDPPTGVSGAPTDN-----NIMIWNAVIFGPHDTPFEDGTFKL 392
MS A RL + K + D P G P N N+ W I G DT +E G +++
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRI 60
Query: 393 TIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL-QNR-WSPTYDVSAILTSIQSLL 566
+ F +++P+ PP +F +FHPNVY G +CL +L +N+ W P+ + +L IQ LL
Sbjct: 61 RMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLL 120
Query: 567 SDPNPNSPANSMAAQLYKENRREYEKRVK 653
+ PN PA + A Q+Y +NR EYEKRVK
Sbjct: 121 NHPNIEDPAQAEAYQIYCQNRAEYEKRVK 149
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 113 bits (272), Expect = 2e-25
Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 7/149 (4%)
Frame = +3
Query: 228 MSTPAXXRLMRDFKRLQXDPPTGVSGAPTDN-----NIMIWNAVIFGPHDTPFEDGTFKL 392
MS A RL + K + D P G P N N+ W I G DT +E G +++
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRI 60
Query: 393 TIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL-QNR-WSPTYDVSAILTSIQSLL 566
+ F +++P+ PP +F +FHPNVY G +CL +L +N+ W P+ + +L IQ LL
Sbjct: 61 RMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLL 120
Query: 567 SDPNPNSPANSMAAQLYKENRREYEKRVK 653
+ PN PA + A Q+Y +NR EYEKRVK
Sbjct: 121 NHPNIEDPAQAEAYQIYCQNRAEYEKRVK 149
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 113 bits (272), Expect = 2e-25
Identities = 63/168 (37%), Positives = 94/168 (55%), Gaps = 17/168 (10%)
Frame = +3
Query: 219 KIKMSTPAXXRLMRDFKRLQXDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTI 398
K S+ A L + K LQ P G + ++N+ +W I+GP T ++ G FK +I
Sbjct: 4 KASTSSGALRALTMELKNLQSQPVEGFTIDVNEDNLFVWTVGIYGPPKTLYQGGYFKASI 63
Query: 399 EFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDILQN-------------RWSPTYDVSA 539
F YP PP+++F +K++HPNVY +G +C+ IL + RW+PT V
Sbjct: 64 RFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISILHSPIDDPQSGELACERWNPTQSVRT 123
Query: 540 ILTSIQSLLSDPNPNSPANSMAAQLY---KENR-REYEKRVKACVEQS 671
IL S+ SLL++PN +SPAN A+ +Y KE++ EY K V VE+S
Sbjct: 124 ILLSVISLLNEPNTSSPANVDASVMYRKWKEDQDPEYAKIVTKQVEES 171
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 96.3 bits (229), Expect = 4e-20
Identities = 50/136 (36%), Positives = 78/136 (57%), Gaps = 4/136 (2%)
Frame = +3
Query: 228 MSTPAXXRLMRDFKRLQXDPP---TGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTI 398
MS A RL R+ K + + TG+ + N+ I GP DTP+ G F L I
Sbjct: 1 MSNIAFNRLQRECKEVVTNSEISETGIMIEILNENLTEIKGHIRGPPDTPYAGGMFDLDI 60
Query: 399 EFTEEYPNKPPTVRFVSKMFHPNVYADGG-ICLDILQNRWSPTYDVSAILTSIQSLLSDP 575
+ ++YP PP V+F +K++HPNV + G ICLDIL+++W+ + + +L SIQ+L+ P
Sbjct: 61 KIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLDILKDQWAASLTLRTVLLSIQALMCTP 120
Query: 576 NPNSPANSMAAQLYKE 623
P P +++ A+ Y E
Sbjct: 121 EPKDPQDAVVAKQYME 136
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 89.8 bits (213), Expect = 3e-18
Identities = 39/106 (36%), Positives = 65/106 (61%), Gaps = 2/106 (1%)
Frame = +3
Query: 351 GPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNV-YADGGICLDILQNRWSPTY 527
GP DT +E+G +++ ++ ++YP K P++ F++K+FHPN+ A G +CLD++ W+ Y
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQAWTALY 100
Query: 528 DVSAIL-TSIQSLLSDPNPNSPANSMAAQLYKENRREYEKRVKACV 662
D++ I T + LL+ PN P N AA+LY EY + + V
Sbjct: 101 DLTNIFDTFLPQLLTYPNAADPLNGEAARLYIHKPEEYRRTCREYV 146
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 83.4 bits (197), Expect = 3e-16
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 19/153 (12%)
Frame = +3
Query: 225 KMSTPAXXRLMRDFKRLQXDPP---TGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLT 395
KMS A R+ R K + G+ +NN+M I GP TP+ GTF++
Sbjct: 14 KMSNLALARVTRKCKEVANASDITEAGIHVEIKENNLMDIKGFIKGPEGTPYAGGTFEIK 73
Query: 396 IEFTEEYPNKPPTV---------------RFVSKMFHPNVYADGG-ICLDILQNRWSPTY 527
++ E YP +PP V +FV++++HPN+ + G ICLDIL+++W+ +
Sbjct: 74 VDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDILKDKWTASL 133
Query: 528 DVSAILTSIQSLLSDPNPNSPANSMAAQLYKEN 626
+ +L S+Q++L P P+ P +++ A+ + N
Sbjct: 134 TLRTVLLSLQAMLCSPEPSDPQDAVVAKQFINN 166
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 82.6 bits (195), Expect = 5e-16
Identities = 34/111 (30%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Frame = +3
Query: 315 DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICL 494
+ N++ W ++ P P+ G FK+ I F +YP KPP V F +K++HPNV +G CL
Sbjct: 29 ETNLLKWTVLLI-PDKEPYNKGAFKVGITFPVDYPFKPPKVAFETKIYHPNVDEEGKFCL 87
Query: 495 DIL-QNRWSPTYDVSAILTSIQSLLSDPNPNSPANSMAAQLYKENRREYEK 644
I+ W P ++ ++ SL+++P P+ P + A+ ++++ +++ K
Sbjct: 88 PIVTAENWKPATKTEQVMMALLSLINEPEPSHPIRADVAEEFQKDHKKFMK 138
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 79.0 bits (186), Expect = 6e-15
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
Frame = +3
Query: 228 MSTPAXXRLMRDFKRLQXDPPTG--VSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIE 401
MS A RLM++ +L+ + P G V T N++ W + G T + F L
Sbjct: 1 MSDAATRRLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFT 60
Query: 402 FTEEYPNKPPTVRFVSKMF--HPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLS 569
F +YP P V FV + HP++Y++G ICL IL + W+P V ++ SI S+LS
Sbjct: 61 FGPQYPFNSPEVMFVGETIPAHPHIYSNGHICLSILSDDWTPALSVQSVCLSILSMLS 118
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 75.4 bits (177), Expect = 8e-14
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 3/121 (2%)
Frame = +3
Query: 228 MSTPAXXRLMRDFKRLQXDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 407
+ST A RL +D++RL +P + AP + NI+ W +I G TP+E G + + F
Sbjct: 5 VSTVALQRLKKDYQRLLKEPVPFMKAAPLETNILEWRYIIIGAPKTPYEGGIYMGKLLFP 64
Query: 408 EEYPNKPPTVRFVSKMFHPNVYADGGICLDILQ---NRWSPTYDVSAILTSIQSLLSDPN 578
+++P KPP + ++ + + +CL I + W+P + VS I+T + S ++D
Sbjct: 65 KDFPFKPPAILMLTP--NGRFQTNTRLCLSISDYHPDTWNPAWTVSTIITGLMSFMNDNQ 122
Query: 579 P 581
P
Sbjct: 123 P 123
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 74.9 bits (176), Expect = 1e-13
Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Frame = +3
Query: 342 VIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYA-DGGICL-DILQNRW 515
+I G +TP+E G F+L I+ E YP K PTV+F++K++HP+V DG ICL D+ W
Sbjct: 384 IIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNGVW 443
Query: 516 SPTYDVSAILTSIQSLLSDPNPNSPANSMAAQLYKENRREYEK 644
+ + +L IQS +S+ N P + + NR +EK
Sbjct: 444 PVSMTIYKVLIVIQSWMSNFNEKEPIDVEILEQATNNREVFEK 486
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 73.7 bits (173), Expect = 2e-13
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 3/136 (2%)
Frame = +3
Query: 231 STPAXXRLMRDFKRLQXDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTE 410
S+ A RL +D+ +L DP G+ P ++NI+ W+ + G DTPF G + + F E
Sbjct: 17 SSSAVRRLQKDYAKLMQDPVDGIKALPNEDNILEWHYCLRGSPDTPFYGGYYWGKVIFKE 76
Query: 411 EYPNKPPTVRFVSKMFHPNVYADGGICLDILQ---NRWSPTYDVSAILTSIQSLLSDPNP 581
+P PP + ++ + + +CL I W+P + VSAIL + S + N
Sbjct: 77 NFPWSPPAITMITP--NGRFQTNTRLCLSISDYHPESWNPGWTVSAILIGLHSFM---NE 131
Query: 582 NSPANSMAAQLYKENR 629
NSPA A ++ R
Sbjct: 132 NSPAAGSIAGTPQDQR 147
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 72.9 bits (171), Expect = 4e-13
Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
Frame = +3
Query: 354 PHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL------QNRW 515
P + + G F+ I EY N PP V+ ++K++HPN+ DG ICL IL Q W
Sbjct: 67 PQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGW 126
Query: 516 SPTYDVSAILTSIQSLLSD-PNPNSPANSMAAQLYKENRREYEKRVKACVEQ 668
PT +++ ++ + SL +D + N N AAQ++ +NR + RV+ + +
Sbjct: 127 RPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVREYISR 178
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 68.5 bits (160), Expect = 9e-12
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Frame = +3
Query: 333 WNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL-QN 509
W + GP +P+E G +++++ F ++P PP F + + HPNV G I L +L Q
Sbjct: 71 WICTVPGPRGSPWEGGEYEVSVNF-HKWPIIPPICEFKTPLHHPNVDLRGSIYLKMLEQE 129
Query: 510 RWSPTYDVSAILTSIQSLLSDPNPNSPANSMAAQLYKENRREYEKRVKA 656
WS + +L I +LL+ P+ AN A Y+ R YE + +A
Sbjct: 130 HWSSETSLKKLLREISNLLATPDLTQAANIEAWMEYENQRENYEAKARA 178
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 60.9 bits (141), Expect = 2e-09
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 12/96 (12%)
Frame = +3
Query: 315 DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSK-----MFHPNVYAD 479
+ + I +I GP DTP+ +G F+ I F YP PP F++ F+PN+Y D
Sbjct: 439 EGRVDIIKVLISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYND 498
Query: 480 GGICLDIL-------QNRWSPTYDVSAILTSIQSLL 566
G ICL IL + +W+P + +L SIQ ++
Sbjct: 499 GKICLSILGTWEGRPEEKWNPYCSLMQVLVSIQEVI 534
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 60.5 bits (140), Expect = 2e-09
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Frame = +3
Query: 369 FEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNV-YADGGICLD-ILQNRWSPTYDVSAI 542
+++ F LT++ EYP KPP ++F ++HPNV +C +LQ W P + +
Sbjct: 57 YKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQENWKPETTMEDV 116
Query: 543 LTSIQSLLSDPNPNSPANSMAAQLYKENRREYEKR 647
L ++ LL++P+ + P N AA Y N+ E+ K+
Sbjct: 117 LLNLIVLLNEPDLSRPVNIDAAHDYIHNKVEFVKK 151
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 56.8 bits (131), Expect = 3e-08
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Frame = +3
Query: 228 MSTPAXXRLMRDFKRLQXDPPTG-VS-GAPTDNNIMI--WNAVIFGPHDTPFEDGTFKLT 395
+ P RL+ + + Q G +S G D+++ + W A I GP TP+E + L
Sbjct: 2 VDVPRNFRLLEELEEGQKGKGDGNISWGLEDDSDMTLTRWTASIIGPPRTPYESRIYNLQ 61
Query: 396 IEFTEEYPNKPPTVRFVSKMFHPNVYADGGIC----LDILQNRWSPTYDVSAILTSIQ 557
I+ YP +PPTVRF +K+ V G+ L L+N WS +Y + +L I+
Sbjct: 62 IQCGGNYPREPPTVRFTTKVHMVGVNQSNGVIDKRNLTTLRN-WSNSYMIKTVLEDIR 118
>Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical
protein Y69H2.6 protein.
Length = 292
Score = 51.2 bits (117), Expect = 1e-06
Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 8/160 (5%)
Frame = +3
Query: 216 LKIKMSTPAXXRLMRDFKRLQXDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLT 395
LKI + L +F + P G+ +P+ NN +W VIF F G F+
Sbjct: 12 LKIPGNILKEQALAAEFVEVCRAPIDGIFVSPSANNKFLWFGVIFVRKGI-FGGGIFRFN 70
Query: 396 IEFTEEYPNKPPTVRFV---SKMFHPNVYADGG-ICLD-ILQNRWSPT-YDVSAILTSIQ 557
I E+P+ R + S +FHP + +CL+ W + + +L +Q
Sbjct: 71 IHIPLEFPDASDLPRVIFEQSNLFHPLICTKSKELCLNRSFPEGWKKEKHSLRRVLVVLQ 130
Query: 558 -SLLS-DPNPNSPANSMAAQLYKENRREYEKRVKACVEQS 671
S S D + + N A+ LYKE+R ++ + K CVE S
Sbjct: 131 RSFYSYDVDTDKCINPEASVLYKEHRDKFREIAKECVEAS 170
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 45.6 bits (103), Expect = 7e-05
Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 3/132 (2%)
Frame = +3
Query: 249 RLMRDFKRLQXDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKP 428
RLM++ L+ P P ++N+ W+ I G T FE G + I F +YP KP
Sbjct: 14 RLMKEAMELR-QPTEMYHAQPMEDNLFEWHFTIRGTLGTDFEGGIYHGRIIFPADYPMKP 72
Query: 429 PTVRFVSKMFHPNVYADGGICLDIL---QNRWSPTYDVSAILTSIQSLLSDPNPNSPANS 599
P + ++ + + +CL I W P++ + L ++ L P++P +
Sbjct: 73 PNLILLTP--NGRFELNKKVCLSISGYHPETWLPSWSIRTALLALIGFL----PSTPGGA 126
Query: 600 MAAQLYKENRRE 635
+ + Y R+
Sbjct: 127 LGSLDYPPKERQ 138
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +3
Query: 240 AXXRLMRDFKRLQXDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTI 398
A R+ ++ L DPP S +++ W A I GP ++P++ G F LTI
Sbjct: 2 ALKRIQKELHDLGRDPPAQCSTGSVGDDLYHWQATIMGPPESPYQGGIFFLTI 54
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 41.1 bits (92), Expect = 0.002
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 345 IFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRF 443
I GP DTP+E G F++ + F + YPN P ++F
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKF 67
>AL132952-10|CAB63384.1| 591|Caenorhabditis elegans Hypothetical
protein Y51H4A.13 protein.
Length = 591
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +3
Query: 546 TSIQSLLSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQ 668
+S QS+ +D + A + AQL +E+RRE EKRVK EQ
Sbjct: 396 SSTQSIEADEDI---ARELDAQLIEESRRETEKRVKEEAEQ 433
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 29.9 bits (64), Expect = 3.9
Identities = 21/69 (30%), Positives = 30/69 (43%)
Frame = +3
Query: 258 RDFKRLQXDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTV 437
R K ++ P+G G NN+ W +V D F DG + I YP PP+
Sbjct: 73 RVVKHIRSLEPSGYEGGNEGNNLEAWQSV-QSNQDGVFPDGYDGINIIRNFMYP-PPPSR 130
Query: 438 RFVSKMFHP 464
R + +M P
Sbjct: 131 RHIPEMKPP 139
>Z34802-3|CAA84333.1| 354|Caenorhabditis elegans Hypothetical
protein M88.3 protein.
Length = 354
Score = 28.7 bits (61), Expect = 9.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 666 VLHMLSLSFRILVDSPCKAVRPSNLLESLG 577
V+H + + D PCK PSNLL ++G
Sbjct: 103 VVHDVPPPVTAICDGPCKKAFPSNLLNTIG 132
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,042,559
Number of Sequences: 27780
Number of extensions: 445835
Number of successful extensions: 1099
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3422502224
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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