Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_I05
         (1217 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L41642-1|AAA85085.1|  773|Drosophila melanogaster lin19 protein ...    33   0.79 
BT010290-1|AAQ23608.1|  774|Drosophila melanogaster LD20253p pro...    33   0.79 
AF136343-1|AAD33676.1|  774|Drosophila melanogaster Cul-1 protein.     33   0.79 
AE013599-533|AAM68872.1|  774|Drosophila melanogaster CG1877-PD,...    33   0.79 
AE013599-532|AAM68871.1|  774|Drosophila melanogaster CG1877-PC,...    33   0.79 
AE013599-531|AAF59175.1|  774|Drosophila melanogaster CG1877-PB,...    33   0.79 
AE013599-530|AAF59174.1|  774|Drosophila melanogaster CG1877-PA,...    33   0.79 
U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ...    33   1.0  
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA...    33   1.0  

>L41642-1|AAA85085.1|  773|Drosophila melanogaster lin19 protein
           protein.
          Length = 773

 Score = 33.1 bits (72), Expect = 0.79
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
 Frame = +3

Query: 198 NNVENLKENLIEVQQVLDKLLPLKKNYDKMSLPAQIELDLFFVY-------TLNSLHWIH 356
           +N +  +ENLI+V Q+L K   L  + ++ SL  +  ++LF  Y        +N      
Sbjct: 629 DNTQTQQENLIQVLQILLKAKVLTSSDNENSLTPESTVELFLDYKNKKRRININQPLKTE 688

Query: 357 LRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRL 497
           L+ +     KH  +D  L I+A +++  +++ R     +  EV  +L
Sbjct: 689 LKVEQETVHKHIEEDRKLLIQAAIVRIMKMRKRLNHTNLISEVLNQL 735


>BT010290-1|AAQ23608.1|  774|Drosophila melanogaster LD20253p
           protein.
          Length = 774

 Score = 33.1 bits (72), Expect = 0.79
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
 Frame = +3

Query: 198 NNVENLKENLIEVQQVLDKLLPLKKNYDKMSLPAQIELDLFFVY-------TLNSLHWIH 356
           +N +  +ENLI+V Q+L K   L  + ++ SL  +  ++LF  Y        +N      
Sbjct: 630 DNTQTQQENLIQVLQILLKAKVLTSSDNENSLTPESTVELFLDYKNKKRRININQPLKTE 689

Query: 357 LRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRL 497
           L+ +     KH  +D  L I+A +++  +++ R     +  EV  +L
Sbjct: 690 LKVEQETVHKHIEEDRKLLIQAAIVRIMKMRKRLNHTNLISEVLNQL 736


>AF136343-1|AAD33676.1|  774|Drosophila melanogaster Cul-1 protein.
          Length = 774

 Score = 33.1 bits (72), Expect = 0.79
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
 Frame = +3

Query: 198 NNVENLKENLIEVQQVLDKLLPLKKNYDKMSLPAQIELDLFFVY-------TLNSLHWIH 356
           +N +  +ENLI+V Q+L K   L  + ++ SL  +  ++LF  Y        +N      
Sbjct: 630 DNTQTQQENLIQVLQILLKAKVLTSSDNENSLTPESTVELFLDYKNKKRRININQPLKTE 689

Query: 357 LRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRL 497
           L+ +     KH  +D  L I+A +++  +++ R     +  EV  +L
Sbjct: 690 LKVEQETVHKHIEEDRKLLIQAAIVRIMKMRKRLNHTNLISEVLNQL 736


>AE013599-533|AAM68872.1|  774|Drosophila melanogaster CG1877-PD,
           isoform D protein.
          Length = 774

 Score = 33.1 bits (72), Expect = 0.79
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
 Frame = +3

Query: 198 NNVENLKENLIEVQQVLDKLLPLKKNYDKMSLPAQIELDLFFVY-------TLNSLHWIH 356
           +N +  +ENLI+V Q+L K   L  + ++ SL  +  ++LF  Y        +N      
Sbjct: 630 DNTQTQQENLIQVLQILLKAKVLTSSDNENSLTPESTVELFLDYKNKKRRININQPLKTE 689

Query: 357 LRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRL 497
           L+ +     KH  +D  L I+A +++  +++ R     +  EV  +L
Sbjct: 690 LKVEQETVHKHIEEDRKLLIQAAIVRIMKMRKRLNHTNLISEVLNQL 736


>AE013599-532|AAM68871.1|  774|Drosophila melanogaster CG1877-PC,
           isoform C protein.
          Length = 774

 Score = 33.1 bits (72), Expect = 0.79
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
 Frame = +3

Query: 198 NNVENLKENLIEVQQVLDKLLPLKKNYDKMSLPAQIELDLFFVY-------TLNSLHWIH 356
           +N +  +ENLI+V Q+L K   L  + ++ SL  +  ++LF  Y        +N      
Sbjct: 630 DNTQTQQENLIQVLQILLKAKVLTSSDNENSLTPESTVELFLDYKNKKRRININQPLKTE 689

Query: 357 LRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRL 497
           L+ +     KH  +D  L I+A +++  +++ R     +  EV  +L
Sbjct: 690 LKVEQETVHKHIEEDRKLLIQAAIVRIMKMRKRLNHTNLISEVLNQL 736


>AE013599-531|AAF59175.1|  774|Drosophila melanogaster CG1877-PB,
           isoform B protein.
          Length = 774

 Score = 33.1 bits (72), Expect = 0.79
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
 Frame = +3

Query: 198 NNVENLKENLIEVQQVLDKLLPLKKNYDKMSLPAQIELDLFFVY-------TLNSLHWIH 356
           +N +  +ENLI+V Q+L K   L  + ++ SL  +  ++LF  Y        +N      
Sbjct: 630 DNTQTQQENLIQVLQILLKAKVLTSSDNENSLTPESTVELFLDYKNKKRRININQPLKTE 689

Query: 357 LRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRL 497
           L+ +     KH  +D  L I+A +++  +++ R     +  EV  +L
Sbjct: 690 LKVEQETVHKHIEEDRKLLIQAAIVRIMKMRKRLNHTNLISEVLNQL 736


>AE013599-530|AAF59174.1|  774|Drosophila melanogaster CG1877-PA,
           isoform A protein.
          Length = 774

 Score = 33.1 bits (72), Expect = 0.79
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
 Frame = +3

Query: 198 NNVENLKENLIEVQQVLDKLLPLKKNYDKMSLPAQIELDLFFVY-------TLNSLHWIH 356
           +N +  +ENLI+V Q+L K   L  + ++ SL  +  ++LF  Y        +N      
Sbjct: 630 DNTQTQQENLIQVLQILLKAKVLTSSDNENSLTPESTVELFLDYKNKKRRININQPLKTE 689

Query: 357 LRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRL 497
           L+ +     KH  +D  L I+A +++  +++ R     +  EV  +L
Sbjct: 690 LKVEQETVHKHIEEDRKLLIQAAIVRIMKMRKRLNHTNLISEVLNQL 736


>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and fatty
            acid-bindingglycoprotein protein.
          Length = 3351

 Score = 32.7 bits (71), Expect = 1.0
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = +3

Query: 153  WDFKYGELAKDKDFVNNVENLKENLIEVQQVLDKLLPLKK 272
            W     E+ KD ++++  EN+KE L + +QV DK++ L K
Sbjct: 2424 WHIVESEINKDSEYIS--ENIKERLKKSRQVTDKIVKLAK 2461


>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
            protein.
          Length = 3351

 Score = 32.7 bits (71), Expect = 1.0
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = +3

Query: 153  WDFKYGELAKDKDFVNNVENLKENLIEVQQVLDKLLPLKK 272
            W     E+ KD ++++  EN+KE L + +QV DK++ L K
Sbjct: 2424 WHIVESEINKDSEYIS--ENIKERLKKSRQVTDKIVKLAK 2461


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,388,220
Number of Sequences: 53049
Number of extensions: 716728
Number of successful extensions: 1649
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1649
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6478647390
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)