Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_I03
         (1229 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   2.0  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   4.7  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   6.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +1

Query: 886  WTSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPS 1002
            W+S ++   W  T    +  +R   +S   RPT  ++P+
Sbjct: 1043 WSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWPT 1081



 Score = 22.6 bits (46), Expect = 6.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 925  PVSTSHWSRTRQSSLPRRPT 984
            P +T+HW     +S   RPT
Sbjct: 1177 PSTTNHWQTKTTTSTTTRPT 1196


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -3

Query: 516 QRACGFCPKPNLRFPFQWCSDHGHSCW 436
           Q  C +   PN       C+D   SCW
Sbjct: 15  QLECNWSSGPNATLQSSACTDDLSSCW 41


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +3

Query: 441 NYARGHYTIGKEIVDLVLDRIRKLADQCTG 530
           +YAR     G  IVD+ LD  R L   CTG
Sbjct: 392 SYARAKGLGGIAIVDITLDDFRGL---CTG 418


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 260,383
Number of Sequences: 336
Number of extensions: 5750
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 35966350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)