Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_I02
         (1181 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D57350 Cluster: PREDICTED: hypothetical protein;...    41   0.054
UniRef50_UPI0000DB7786 Cluster: PREDICTED: hypothetical protein;...    36   1.5  
UniRef50_A3WKQ5 Cluster: Type I site-specific deoxyribonuclease ...    36   2.0  
UniRef50_Q5BW13 Cluster: SJCHGC01063 protein; n=1; Schistosoma j...    35   4.7  
UniRef50_A2DRI3 Cluster: Internalin, putative; n=1; Trichomonas ...    34   8.2  

>UniRef50_UPI0000D57350 Cluster: PREDICTED: hypothetical protein;
           n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
           protein - Tribolium castaneum
          Length = 289

 Score = 41.1 bits (92), Expect = 0.054
 Identities = 20/33 (60%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = +1

Query: 523 AKKEAVIEK-KNRKNKAGAEVEKPADFDDGNWE 618
           A K  VIE+ KN+KN      EKP DFDDGNWE
Sbjct: 118 ANKNKVIEEVKNKKNLKKFLSEKPVDFDDGNWE 150


>UniRef50_UPI0000DB7786 Cluster: PREDICTED: hypothetical protein;
           n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
           - Apis mellifera
          Length = 293

 Score = 36.3 bits (80), Expect = 1.5
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +1

Query: 520 LAKKEAVIEKKNRKNKAGAEVEKPADFDDGNWE 618
           + K+  + + KN+KN      EKP DFD+G+WE
Sbjct: 127 VGKENKIEQVKNKKNLKNLFQEKPIDFDEGDWE 159


>UniRef50_A3WKQ5 Cluster: Type I site-specific deoxyribonuclease
           HsdR; n=5; cellular organisms|Rep: Type I site-specific
           deoxyribonuclease HsdR - Idiomarina baltica OS145
          Length = 1072

 Score = 35.9 bits (79), Expect = 2.0
 Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = +1

Query: 817 LDANVTKALQEQVKEFERAMKEAQRRDQGIVNDEGSNEIEELTDV-KDLXSXKKRKI 984
           L A++  A +EQ++  +  +K  +  D  +V  +G NE++EL D   D+   +KR +
Sbjct: 575 LQADLASAPEEQLEALKHKIKVLETTDMAVVVSQGQNEVKELADKGLDILPHRKRMV 631


>UniRef50_Q5BW13 Cluster: SJCHGC01063 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC01063 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 232

 Score = 34.7 bits (76), Expect = 4.7
 Identities = 19/76 (25%), Positives = 36/76 (47%)
 Frame = +1

Query: 769 EDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAMKEAQRRDQGIVNDEGSNEIEELTD 948
           E ++E ++ +  K   +      + +E V  FER +K A    Q ++ND+ +N  + +  
Sbjct: 89  ETTNENIRRLINKLFEISMQRINSAKEAVDTFERNLKTANNNTQQLINDQFNNVTQRIRS 148

Query: 949 VKDLXSXKKRKIXRXN 996
           VK+  S  K  +   N
Sbjct: 149 VKEAVSEFKGSLETTN 164


>UniRef50_A2DRI3 Cluster: Internalin, putative; n=1; Trichomonas
           vaginalis G3|Rep: Internalin, putative - Trichomonas
           vaginalis G3
          Length = 418

 Score = 33.9 bits (74), Expect = 8.2
 Identities = 25/76 (32%), Positives = 41/76 (53%)
 Frame = +1

Query: 748 VEAARPNEDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAMKEAQRRDQGIVNDEGSN 927
           V+   P E+  ++    ++K   L A+++K  QE VKE E A  EA++ +Q     E +N
Sbjct: 166 VKQPLPEEEPEQQTLTKTIKPFTLRASLSKKKQESVKE-EAA--EAEKEEQ--PQKEENN 220

Query: 928 EIEELTDVKDLXSXKK 975
           E +EL + K+    KK
Sbjct: 221 EDKELENAKETEEEKK 236


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,741,776
Number of Sequences: 1657284
Number of extensions: 9394964
Number of successful extensions: 25088
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25074
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 118318866513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)