Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_I02
         (1181 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    27   1.1  
AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    26   2.5  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    26   2.5  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   10.0 
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    24   10.0 

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 27.1 bits (57), Expect = 1.1
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +1

Query: 772  DSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAMKEAQR 891
            D+ EK++  ++K       VT+ +Q   +EFE A K+A++
Sbjct: 1015 DTLEKIQTPNMKAMQKLDRVTEKIQSTNEEFEAARKKAKK 1054


>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 25.8 bits (54), Expect = 2.5
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 225 EHDLCVSHLFQDLHFPYLVLRLQ 157
           EH+LCV  + Q+L F ++ L  Q
Sbjct: 204 EHELCVGRIAQELGFQHVTLSHQ 226


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 25.8 bits (54), Expect = 2.5
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 225 EHDLCVSHLFQDLHFPYLVLRLQ 157
           EH+LCV  + Q+L F ++ L  Q
Sbjct: 204 EHELCVGRIAQELGFQHVTLSHQ 226


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.8 bits (49), Expect = 10.0
 Identities = 13/49 (26%), Positives = 26/49 (53%)
 Frame = +1

Query: 835 KALQEQVKEFERAMKEAQRRDQGIVNDEGSNEIEELTDVKDLXSXKKRK 981
           +AL++  +  E+A  +AQ+R + +     +NE  E   ++D     K+K
Sbjct: 360 QALKDACEADEQAFAKAQKRFEAVSAGLSTNEDGEAATLQDQLIAAKQK 408


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 23.8 bits (49), Expect = 10.0
 Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = +1

Query: 880 EAQRRDQGIVNDEGS-NEIEELTDV 951
           EA  R QG++ DEGS   + ++T+V
Sbjct: 300 EAMARIQGVLRDEGSVRVLTQMTEV 324


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,520
Number of Sequences: 2352
Number of extensions: 10553
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 133660269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)