Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_I02
         (1181 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p...    29   8.5  
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr...    29   8.5  
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.     29   8.5  
M37234-1|AAA28120.1|  272|Caenorhabditis elegans myosin I protein.     29   8.5  

>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
            protein R06C7.10 protein.
          Length = 1938

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +1

Query: 745  DVEAARPNEDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAMKEAQRRDQGI 906
            + EAA   E+S  KV  + ++   + + + K +QE+ +EFE   K  QR  + I
Sbjct: 1553 EAEAALEAEES--KVLRLQIEVQQIRSEIEKRIQEKEEEFENTRKNHQRALESI 1604


>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
            R06C7.10 protein.
          Length = 1938

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +1

Query: 745  DVEAARPNEDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAMKEAQRRDQGI 906
            + EAA   E+S  KV  + ++   + + + K +QE+ +EFE   K  QR  + I
Sbjct: 1553 EAEAALEAEES--KVLRLQIEVQQIRSEIEKRIQEKEEEFENTRKNHQRALESI 1604


>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
          Length = 1938

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +1

Query: 745  DVEAARPNEDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAMKEAQRRDQGI 906
            + EAA   E+S  KV  + ++   + + + K +QE+ +EFE   K  QR  + I
Sbjct: 1553 EAEAALEAEES--KVLRLQIEVQQIRSEIEKRIQEKEEEFENTRKNHQRALESI 1604


>M37234-1|AAA28120.1|  272|Caenorhabditis elegans myosin I protein.
          Length = 272

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +1

Query: 745 DVEAARPNEDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAMKEAQRRDQGI 906
           + EAA   E+S  KV  + ++   + + + K +QE+ +EFE   K  QR  + I
Sbjct: 62  EAEAALEAEES--KVLRLQIEVQQIRSEIEKRIQEKEEEFENTRKNHQRALESI 113


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,229,111
Number of Sequences: 27780
Number of extensions: 237594
Number of successful extensions: 765
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3234681980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)