Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_I01
         (1210 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937...    34   0.26 
02_04_0103 - 19768288-19768737                                         32   1.0  
10_08_0966 + 21921343-21921354,21923196-21923264,21924165-21924266     29   7.3  
05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938     29   7.3  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   7.3  
02_01_0475 + 3422629-3422695,3422960-3423216                           29   7.3  
11_01_0288 + 2151552-2151581,2151818-2151893,2152019-2153460           29   9.7  
08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119     29   9.7  

>02_04_0516 +
           23593088-23593116,23593209-23593336,23593527-23593714,
           23593861-23593919,23594997-23595345,23596081-23596333,
           23596404-23597476
          Length = 692

 Score = 33.9 bits (74), Expect = 0.26
 Identities = 18/38 (47%), Positives = 20/38 (52%)
 Frame = -3

Query: 215 LKKKXKKKXXXXFXXXKKKKXKXRKKKXXKXXXKXXKK 102
           +KKK KKK        KKKK K +KKK  K   K  KK
Sbjct: 67  MKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKK 104



 Score = 33.1 bits (72), Expect = 0.45
 Identities = 18/37 (48%), Positives = 19/37 (51%)
 Frame = -3

Query: 212 KKKXKKKXXXXFXXXKKKKXKXRKKKXXKXXXKXXKK 102
           KKK KKK        KKKK K +KKK  K   K  KK
Sbjct: 70  KKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKK 106



 Score = 31.1 bits (67), Expect = 1.8
 Identities = 17/37 (45%), Positives = 18/37 (48%)
 Frame = -3

Query: 212 KKKXKKKXXXXFXXXKKKKXKXRKKKXXKXXXKXXKK 102
           KKK KKK        KKKK   +KKK  K   K  KK
Sbjct: 69  KKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKK 105



 Score = 31.1 bits (67), Expect = 1.8
 Identities = 17/37 (45%), Positives = 18/37 (48%)
 Frame = -3

Query: 212 KKKXKKKXXXXFXXXKKKKXKXRKKKXXKXXXKXXKK 102
           KKK KKK        KKK  K +KKK  K   K  KK
Sbjct: 71  KKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKK 107



 Score = 30.7 bits (66), Expect = 2.4
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -3

Query: 164 KKKXKXRKKKXXKXXXKXXKKGXXEEXXRXRXEXXKKXKK 45
           KKK K +KKK  K   K  KK   ++  + + +  KK KK
Sbjct: 68  KKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKK 107



 Score = 29.9 bits (64), Expect = 4.2
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = -3

Query: 212 KKKXKKKXXXXFXXXKKKKXKXRKKKXXKXXXKXXKK 102
           KKK KKK        KK K K +KKK  K   K  K+
Sbjct: 72  KKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKKR 108


>02_04_0103 - 19768288-19768737
          Length = 149

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -3

Query: 212 KKKXKKKXXXXFXXXKKKKXKXRKKKXXKXXXKXXKKG 99
           K++ K+K        KKKK K +KKK  K   K  KKG
Sbjct: 103 KRRRKRKRKRKKKKKKKKKKKKKKKKKKKKKKKKKKKG 140



 Score = 28.7 bits (61), Expect = 9.7
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -3

Query: 215 LKKKXKKKXXXXFXXXKKKKXKXRKKKXXKXXXKXXKK 102
           +++K ++K        KKKK K +KKK  K   K  KK
Sbjct: 100 MREKRRRKRKRKRKKKKKKKKKKKKKKKKKKKKKKKKK 137


>10_08_0966 + 21921343-21921354,21923196-21923264,21924165-21924266
          Length = 60

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 15/29 (51%), Positives = 16/29 (55%)
 Frame = -3

Query: 212 KKKXKKKXXXXFXXXKKKKXKXRKKKXXK 126
           KKK KKK        KKKK K +KKK  K
Sbjct: 28  KKKKKKKKKKKKKKKKKKKKKKKKKKKKK 56


>05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938
          Length = 331

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = +1

Query: 91  SXXPFXFXFXXXFXXFFFLXFXFFFXXF 174
           S   F F F   F  FFF  F FFF  F
Sbjct: 58  SKEDFFFFFFFFFFFFFFFFFFFFFFFF 85



 Score = 29.1 bits (62), Expect = 7.3
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +1

Query: 103 FXFXFXXXFXXFFFLXFXFFFXXFXK 180
           F F F   F  FFF  F FFF  F +
Sbjct: 63  FFFFFFFFFFFFFFFFFFFFFFFFDR 88


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 13/32 (40%), Positives = 13/32 (40%)
 Frame = -1

Query: 724 PXXXPPXFFXXPXPXXPXGXXFXPPPPXXXGG 629
           P   PP     P P  P G    PPPP   GG
Sbjct: 354 PPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGG 385


>02_01_0475 + 3422629-3422695,3422960-3423216
          Length = 107

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 15/29 (51%), Positives = 16/29 (55%)
 Frame = -3

Query: 212 KKKXKKKXXXXFXXXKKKKXKXRKKKXXK 126
           KKK KKK        KKKK K +KKK  K
Sbjct: 43  KKKKKKKKKKKKKKKKKKKKKKKKKKKKK 71



 Score = 29.1 bits (62), Expect = 7.3
 Identities = 15/29 (51%), Positives = 16/29 (55%)
 Frame = -3

Query: 212 KKKXKKKXXXXFXXXKKKKXKXRKKKXXK 126
           KKK KKK        KKKK K +KKK  K
Sbjct: 45  KKKKKKKKKKKKKKKKKKKKKKKKKKKNK 73


>11_01_0288 + 2151552-2151581,2151818-2151893,2152019-2153460
          Length = 515

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
 Frame = +3

Query: 603 KXXKNXXXPPPXXXGGGGXK-XXPXGXXGXGXKKKXGG 713
           K  K    PPP   GGG  K     G  G G KK  GG
Sbjct: 236 KMMKQMAMPPPNAGGGGDKKGGNNGGGAGNGGKKGGGG 273


>08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119
          Length = 440

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -3

Query: 215 LKKKXKKKXXXXFXXXKKKKXKXRKKKXXK 126
           +K+K KKK        KKKK K +KKK  K
Sbjct: 370 IKRKKKKKKKKKKKKKKKKKKKKKKKKKKK 399


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,556,063
Number of Sequences: 37544
Number of extensions: 347435
Number of successful extensions: 1314
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3701409336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)