Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_H23
         (1151 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003597-1|AAO39600.1|   94|Drosophila melanogaster GM19936p pro...   159   5e-39
AE014134-1360|AAF52576.1|   94|Drosophila melanogaster CG18591-P...   159   5e-39
AY070698-1|AAL48169.1|   76|Drosophila melanogaster RH35475p pro...    40   0.008
AE014298-2437|AAF48634.1|   76|Drosophila melanogaster CG9742-PA...    40   0.008
AY113521-1|AAM29526.1|   91|Drosophila melanogaster RE60135p pro...    39   0.015
AE014296-1060|AAF50703.1|   91|Drosophila melanogaster CG6610-PA...    39   0.015
BT023632-1|AAY85032.1|   95|Drosophila melanogaster IP05684p pro...    33   0.98 
AE014296-355|AAF47567.1|   95|Drosophila melanogaster CG2021-PA ...    33   0.98 
L02919-1|AAA28858.1|  199|Drosophila melanogaster ribonucleoprot...    29   9.1  
AY061171-1|AAL28719.1|  199|Drosophila melanogaster LD14049p pro...    29   9.1  
AE014134-1881|AAF52947.1|  199|Drosophila melanogaster CG5352-PA...    29   9.1  

>BT003597-1|AAO39600.1|   94|Drosophila melanogaster GM19936p
           protein.
          Length = 94

 Score =  159 bits (387), Expect = 5e-39
 Identities = 70/87 (80%), Positives = 84/87 (96%)
 Frame = +2

Query: 65  MAYKGPPKVQKVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEA 244
           M++KG PKVQKVMVQPINLIFRYLQNRSRVQ+WLYEN++LRIEGHIVGFDEYMN+VLD+A
Sbjct: 1   MSFKGNPKVQKVMVQPINLIFRYLQNRSRVQVWLYENISLRIEGHIVGFDEYMNLVLDDA 60

Query: 245 EEVHMKSKNRKQIGRIMMKGDNITLIQ 325
           EEV++K++ R+ +GRIM+KGDNITLIQ
Sbjct: 61  EEVYVKTRQRRNLGRIMLKGDNITLIQ 87


>AE014134-1360|AAF52576.1|   94|Drosophila melanogaster CG18591-PA
           protein.
          Length = 94

 Score =  159 bits (387), Expect = 5e-39
 Identities = 70/87 (80%), Positives = 84/87 (96%)
 Frame = +2

Query: 65  MAYKGPPKVQKVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEA 244
           M++KG PKVQKVMVQPINLIFRYLQNRSRVQ+WLYEN++LRIEGHIVGFDEYMN+VLD+A
Sbjct: 1   MSFKGNPKVQKVMVQPINLIFRYLQNRSRVQVWLYENISLRIEGHIVGFDEYMNLVLDDA 60

Query: 245 EEVHMKSKNRKQIGRIMMKGDNITLIQ 325
           EEV++K++ R+ +GRIM+KGDNITLIQ
Sbjct: 61  EEVYVKTRQRRNLGRIMLKGDNITLIQ 87


>AY070698-1|AAL48169.1|   76|Drosophila melanogaster RH35475p
           protein.
          Length = 76

 Score = 39.5 bits (88), Expect = 0.008
 Identities = 18/66 (27%), Positives = 38/66 (57%)
 Frame = +2

Query: 128 RYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKSKNRKQIGRIMMKGD 307
           +Y+  R  +++    N    + G + GFD +MN+VLD+  E   K   +  IG ++++G+
Sbjct: 11  KYMDKRMMLKL----NGGRAVTGILRGFDPFMNVVLDDTVE-ECKDNTKNNIGMVVIRGN 65

Query: 308 NITLIQ 325
           +I +++
Sbjct: 66  SIVMVE 71


>AE014298-2437|AAF48634.1|   76|Drosophila melanogaster CG9742-PA
           protein.
          Length = 76

 Score = 39.5 bits (88), Expect = 0.008
 Identities = 18/66 (27%), Positives = 38/66 (57%)
 Frame = +2

Query: 128 RYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKSKNRKQIGRIMMKGD 307
           +Y+  R  +++    N    + G + GFD +MN+VLD+  E   K   +  IG ++++G+
Sbjct: 11  KYMDKRMMLKL----NGGRAVTGILRGFDPFMNVVLDDTVE-ECKDNTKNNIGMVVIRGN 65

Query: 308 NITLIQ 325
           +I +++
Sbjct: 66  SIVMVE 71


>AY113521-1|AAM29526.1|   91|Drosophila melanogaster RE60135p
           protein.
          Length = 91

 Score = 38.7 bits (86), Expect = 0.015
 Identities = 20/83 (24%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
 Frame = +2

Query: 80  PPKVQKVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHM 259
           PP      + P+ L+ + + +R  +   + +N +  + G ++GFD+++N++LD+  E   
Sbjct: 5   PPPSNISTLMPLELVDKCIGSRIHI---IMKN-DKEMVGTLLGFDDFVNMLLDDVTEYEN 60

Query: 260 KSKNRK--QIGRIMMKGDNITLI 322
               R+  ++ +I++ G+NIT++
Sbjct: 61  TPDGRRITKLDQILLNGNNITML 83


>AE014296-1060|AAF50703.1|   91|Drosophila melanogaster CG6610-PA
           protein.
          Length = 91

 Score = 38.7 bits (86), Expect = 0.015
 Identities = 20/83 (24%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
 Frame = +2

Query: 80  PPKVQKVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHM 259
           PP      + P+ L+ + + +R  +   + +N +  + G ++GFD+++N++LD+  E   
Sbjct: 5   PPPSNISTLMPLELVDKCIGSRIHI---IMKN-DKEMVGTLLGFDDFVNMLLDDVTEYEN 60

Query: 260 KSKNRK--QIGRIMMKGDNITLI 322
               R+  ++ +I++ G+NIT++
Sbjct: 61  TPDGRRITKLDQILLNGNNITML 83


>BT023632-1|AAY85032.1|   95|Drosophila melanogaster IP05684p
           protein.
          Length = 95

 Score = 32.7 bits (71), Expect = 0.98
 Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
 Frame = +2

Query: 194 GHIVGFDEYMNIVLDEA-EEVHMKSKNRKQI--GRIMMKGDNITLI 322
           G + GFD+ +NI++DE  E V   +   +QI  G  +++GDNI +I
Sbjct: 24  GTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHIIRGDNIAVI 69


>AE014296-355|AAF47567.1|   95|Drosophila melanogaster CG2021-PA
           protein.
          Length = 95

 Score = 32.7 bits (71), Expect = 0.98
 Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
 Frame = +2

Query: 194 GHIVGFDEYMNIVLDEA-EEVHMKSKNRKQI--GRIMMKGDNITLI 322
           G + GFD+ +NI++DE  E V   +   +QI  G  +++GDNI +I
Sbjct: 24  GTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHIIRGDNIAVI 69


>L02919-1|AAA28858.1|  199|Drosophila melanogaster ribonucleoprotein
           protein.
          Length = 199

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 9/49 (18%)
 Frame = +2

Query: 194 GHIVGFDEYMNIVLDEAEEVH-MKSKN--------RKQIGRIMMKGDNI 313
           G    FD++MN++L + EE   ++SKN        ++ +G ++++G+NI
Sbjct: 29  GTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLGFVLLRGENI 77


>AY061171-1|AAL28719.1|  199|Drosophila melanogaster LD14049p
           protein.
          Length = 199

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 9/49 (18%)
 Frame = +2

Query: 194 GHIVGFDEYMNIVLDEAEEVH-MKSKN--------RKQIGRIMMKGDNI 313
           G    FD++MN++L + EE   ++SKN        ++ +G ++++G+NI
Sbjct: 29  GTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLGFVLLRGENI 77


>AE014134-1881|AAF52947.1|  199|Drosophila melanogaster CG5352-PA
           protein.
          Length = 199

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 9/49 (18%)
 Frame = +2

Query: 194 GHIVGFDEYMNIVLDEAEEVH-MKSKN--------RKQIGRIMMKGDNI 313
           G    FD++MN++L + EE   ++SKN        ++ +G ++++G+NI
Sbjct: 29  GTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLGFVLLRGENI 77


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,418,281
Number of Sequences: 53049
Number of extensions: 463636
Number of successful extensions: 1541
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1539
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 6066567738
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)