Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_H20
(1192 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 175 7e-44
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 175 7e-44
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 141 8e-34
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 138 7e-33
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 132 6e-31
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 123 2e-28
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 105 5e-23
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 100 2e-21
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 100 2e-21
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 95 9e-20
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 93 3e-19
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 85 9e-17
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 58 1e-08
U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical pr... 48 1e-05
AC006627-8|AAK85458.1| 276|Caenorhabditis elegans Hypothetical ... 40 0.003
Z46828-1|CAA86856.1| 542|Caenorhabditis elegans Hypothetical pr... 31 1.6
U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory... 31 1.6
Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical pr... 29 6.5
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 175 bits (425), Expect = 7e-44
Identities = 88/215 (40%), Positives = 126/215 (58%), Gaps = 1/215 (0%)
Frame = +3
Query: 348 VATLKLRXGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 527
V +LKL G +P I LGT P ++TA+ GYR ID A++Y N+K +G+A+K
Sbjct: 2 VQSLKLNSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKE 61
Query: 528 KIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGNS 707
+D+G V+R+ELFI K+W+TFH I L+DL L + DL LIH P EG
Sbjct: 62 ILDEGKVKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAE 121
Query: 708 SIPK-ISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQIQKILDKGKVKPAVN 884
P + ++YS+ DY++ W E G +SIG+SNF +QIQ++ D +VKPA
Sbjct: 122 LFPAGENGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSNFTHSQIQRVWDAAEVKPACL 181
Query: 885 QVECHPYLTXXXLHKFXEEKEIILSXFXVLGSKGT 989
QVE HPY T L +F +EK I++ + LG+ G+
Sbjct: 182 QVELHPYFTQVKLREFCKEKGIVVVGYSPLGNPGS 216
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 175 bits (425), Expect = 7e-44
Identities = 88/215 (40%), Positives = 126/215 (58%), Gaps = 1/215 (0%)
Frame = +3
Query: 348 VATLKLRXGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 527
V +LKL G +P I LGT P ++TA+ GYR ID A++Y N+K +G+A+K
Sbjct: 2 VQSLKLNSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKE 61
Query: 528 KIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGNS 707
+D+G V+R+ELFI K+W+TFH I L+DL L + DL LIH P EG
Sbjct: 62 ILDEGKVKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAE 121
Query: 708 SIPK-ISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQIQKILDKGKVKPAVN 884
P + ++YS+ DY++ W E G +SIG+SNF +QIQ++ D +VKPA
Sbjct: 122 LFPAGENGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSNFTHSQIQRVWDAAEVKPACL 181
Query: 885 QVECHPYLTXXXLHKFXEEKEIILSXFXVLGSKGT 989
QVE HPY T L +F +EK I++ + LG+ G+
Sbjct: 182 QVELHPYFTQVKLREFCKEKGIVVVGYSPLGNPGS 216
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 141 bits (342), Expect = 8e-34
Identities = 78/218 (35%), Positives = 120/218 (55%), Gaps = 6/218 (2%)
Frame = +3
Query: 354 TLKLRXGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKI 533
T+ L G MPVI GT LP L E V A++ GYR ID+A + N++ + IK+
Sbjct: 6 TVTLNSGYEMPVIGYGTWQLPKNLAAERVRDALEAGYRHIDSALSFKNQEEVAAGIKDWC 65
Query: 534 DDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKE----G 701
VRR+ELF+ K+W+T+H + L + DL +IH P E G
Sbjct: 66 KIRKVRREELFLSSKIWNTYHSRNRCMQQIDEMLEIFETTYMDLIVIHWPFGWAEDEPPG 125
Query: 702 NSSI-PK-ISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQIQKILDKGKVKP 875
+ P+ + ++YS+ DY++ W +ED G +SIG++NFN Q++++ KG +KP
Sbjct: 126 ERGLWPRGANGKMRYSDVDYLETWKALEDAHRSGKIRSIGLANFNIGQVEQVWTKGLIKP 185
Query: 876 AVNQVECHPYLTXXXLHKFXEEKEIILSXFXVLGSKGT 989
AV QVE +P+L + +F EK IIL+ F + G+ G+
Sbjct: 186 AVLQVEMNPFLDQEEIRQFCREKGIILTAFMLTGNPGS 223
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 138 bits (334), Expect = 7e-33
Identities = 74/216 (34%), Positives = 114/216 (52%), Gaps = 3/216 (1%)
Frame = +3
Query: 348 VATLKLRXGTFMPVIALGTALLPPRLT-TEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 524
V ++ L G +P+ LGT + T + A+D GYR IDTA++Y NE +IGK +
Sbjct: 3 VDSIPLNTGAQLPLFGLGTWQVKDEAELTVALRAALDAGYRLIDTAHLYQNEHIIGKVLH 62
Query: 525 NKIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGN 704
I G ++R+++F+ KL T H + V L L LE+ DL+LIH P K
Sbjct: 63 EYISSGKLKREDIFVTSKLPFTAHAPEDVPKCVESQLKALQLEYIDLYLIHCPFPFKHQE 122
Query: 705 SSIPKI--SSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQIQKILDKGKVKPA 878
S + + + +E ++D W +E L +G K++GVSNF+ Q+Q + D +VKPA
Sbjct: 123 GSFAPLMENGELAVTEIAHIDTWRALEKLYKEGKLKALGVSNFSCNQLQALYDAAEVKPA 182
Query: 879 VNQVECHPYLTXXXLHKFXEEKEIILSXFXVLGSKG 986
QVECH Y L ++ + ++ + LGS G
Sbjct: 183 NQQVECHIYWPQQELRALCKKLGVTVTAYAPLGSPG 218
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 132 bits (318), Expect = 6e-31
Identities = 80/212 (37%), Positives = 113/212 (53%)
Frame = +3
Query: 351 ATLKLRXGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNK 530
A++KL G MPVI LGT P V+TA+ GYR IDTA +Y NE+ IG AIK
Sbjct: 6 ASIKLSNGVEMPVIGLGTWQSSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAIKEL 65
Query: 531 IDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGNSS 710
+++G V+R+ELFI K W+ +E R SL L LE+ DL+L H P + + S
Sbjct: 66 LEEGVVKREELFITTKAWTHELAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDDMSE 125
Query: 711 IPKISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQIQKILDKGKVKPAVNQV 890
I+S ++ D W + + GLAK++GVSN+N+ QI + L G +QV
Sbjct: 126 --HIASPVE-------DVWRQFDAVYKAGLAKAVGVSNWNNDQISRALALGLTPVHNSQV 176
Query: 891 ECHPYLTXXXLHKFXEEKEIILSXFXVLGSKG 986
E H Y F ++ I ++ + LGS G
Sbjct: 177 ELHLYFPQHDHVDFCKKHNISVTSYATLGSPG 208
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 123 bits (297), Expect = 2e-28
Identities = 75/214 (35%), Positives = 110/214 (51%)
Frame = +3
Query: 345 EVATLKLRXGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 524
+V L G MP I LGT + ++ A+ GYR IDTA +Y NE IG A+
Sbjct: 4 KVPIFTLSNGVLMPSIGLGTWQMTGEEGKTVIRNAVLAGYRHIDTATLYQNEHQIGDALA 63
Query: 525 NKIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGN 704
+G ++R+++FI K + D+VE A R SL L L++ DL+L H P S K+
Sbjct: 64 ELFAEGILKREDIFITTKAFCHEVAPDVVEEALRNSLKRLRLDYVDLYLAHIPASTKDDG 123
Query: 705 SSIPKISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQIQKILDKGKVKPAVN 884
S S+ D W G E + GL K+IGVSNFN +QI +I++ KV +
Sbjct: 124 SF---------RSDVKVEDIWRGFEKVYGLGLTKAIGVSNFNESQIVRIMNIQKVPIHAS 174
Query: 885 QVECHPYLTXXXLHKFXEEKEIILSXFXVLGSKG 986
Q+E H YL + ++ I+++ + LGS G
Sbjct: 175 QLELHLYLPQKAHRELCKKHNILITAYATLGSPG 208
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 105 bits (253), Expect = 5e-23
Identities = 63/202 (31%), Positives = 106/202 (52%), Gaps = 2/202 (0%)
Frame = +3
Query: 381 MPVIALGT-ALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRD 557
MP+I +GT + + ++++ GYR IDTA +Y NE IG+ ++ + ++R+
Sbjct: 11 MPLIGIGTWQVQKEEILRQVIDAGFKEGYRFIDTAQVYNNEAKIGRILEKLLPANGLKRE 70
Query: 558 ELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNP-MSLKEGNSSIPKISSVI 734
+++I KL + + SL++L +E+ DL LIH P SLK N + K+
Sbjct: 71 DIWITSKLAPSNAGVKKARESIEESLSNLKVEYLDLLLIHWPGSSLKSENPANKKLR--- 127
Query: 735 QYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQIQKILDKGKVKPAVNQVECHPYLTX 914
+++W M +++A+G +S+GVSNF ++++ V PAVNQVE HP+
Sbjct: 128 -------VESWNVMCEMMAEGKLRSVGVSNFEICHLEELKKDSNVVPAVNQVEYHPHFHQ 180
Query: 915 XXLHKFXEEKEIILSXFXVLGS 980
L K+ E I + LGS
Sbjct: 181 DDLVKYCNENNIHFQAYSSLGS 202
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 100 bits (240), Expect = 2e-21
Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 2/208 (0%)
Frame = +3
Query: 360 KLRXGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDD 539
KL+ G +P +ALGT V+ A+ +GYR+ DTA Y NEK +G A+K +
Sbjct: 3 KLKNGQEIPKLALGTYEAKGDQLFAAVDEALKVGYRSFDTAKYYENEKDLGLALKTLLPR 62
Query: 540 GTVRRDELFIMGKL--WSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGNSSI 713
+ +++++ K+ +S+ + +L+ SL L ++ DL L+H P L + +
Sbjct: 63 HNICSEDIYLTSKVFPYSSKNAAELIRKDVNESLELLDRKYLDLVLVHYPRPLDTEDLN- 121
Query: 714 PKISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQIQKILDKGKVKPAVNQVE 893
+ ++ D W +E L A+G +SIGVSN+ I+++ ++P VNQ+E
Sbjct: 122 -------ENNKMYRKDTWIALEKLHAEGKIRSIGVSNYEPHHIEEMRSYITIEPQVNQIE 174
Query: 894 CHPYLTXXXLHKFXEEKEIILSXFXVLG 977
HP+ L + + EI+ F LG
Sbjct: 175 YHPHFQRKVLRAYCNKNEILFQAFSPLG 202
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 100 bits (239), Expect = 2e-21
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 3/208 (1%)
Frame = +3
Query: 360 KLRXGTFMPVIALGTALLPPRLTTEI-VETAIDMGYRAIDTAYIYGNEKLIGKAIKNKID 536
K G MP I LG + + + ++ +E A+ GYR DTA +Y NE +G ++K +
Sbjct: 13 KFSDGYEMPKIGLGISRIETQQDLDVSIEAALKSGYRQFDTANLYKNETFLGNSLKKYLP 72
Query: 537 DGTVRRDELFIMGKLWSTFHRTDLVETACRI--SLADLGLEFFDLFLIHNPMSLKEGNSS 710
+ R+++FI K+ T + + ET ++ SLA L ++ DL LIH P GN
Sbjct: 73 QFGLTREDVFITTKV-RTLNENTVEETEKQLANSLATLQTDYVDLLLIHYPRDRDTGNDD 131
Query: 711 IPKISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQIQKILDKGKVKPAVNQV 890
+I+ + W +E G +SIGVSN+ + ++ + K++P +NQ
Sbjct: 132 DYEINKSRRKI------VWQTLEKAKESGRVRSIGVSNYEVYHLVEMFEYAKIRPVLNQY 185
Query: 891 ECHPYLTXXXLHKFXEEKEIILSXFXVL 974
E PYLT L KF + I++ + L
Sbjct: 186 EYQPYLTRPTLKKFCDLNNIVVQSYSSL 213
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 95.1 bits (226), Expect = 9e-20
Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 4/209 (1%)
Frame = +3
Query: 360 KLRXGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDD 539
KL G +P + GT + ++ A+ GYR DTA Y NEK +G+A+K +
Sbjct: 14 KLNSGYNIPFVGFGTYKVTGENVPPAIDAALTAGYRMFDTAKYYLNEKELGEALKILLPK 73
Query: 540 GTVRRDELFIMGKLWSTFHRTDLVETACR----ISLADLGLEFFDLFLIHNPMSLKEGNS 707
+ R ++F+ K F + ACR SL L ++ D++L+H P K +S
Sbjct: 74 HGLSRSDVFLTSKF---FPESKNCREACRGFVEESLQSLQTDYIDMYLVHYP---KPNDS 127
Query: 708 SIPKISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQIQKILDKGKVKPAVNQ 887
+++ +Y + Y +E+ A G +SIGVSN+ ++++ KV P NQ
Sbjct: 128 DNDDVNNA-EYRKIAYEV----LEEAKAAGKVRSIGVSNYEIVHLEELKTYAKVPPCANQ 182
Query: 888 VECHPYLTXXXLHKFXEEKEIILSXFXVL 974
+E HP+ L K+ +EK I F L
Sbjct: 183 LEYHPHFARIPLQKYCKEKNIFFQAFSSL 211
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 93.5 bits (222), Expect = 3e-19
Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 1/208 (0%)
Frame = +3
Query: 354 TLKLRXGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKI 533
++KL G P+I LGT + +++ A+ GYR DTA +Y NEK IG A++ +
Sbjct: 2 SIKLNTGYDCPLIGLGTYKIIGDQVLPVLDAALTAGYRLFDTAKVYNNEKEIGDALEILL 61
Query: 534 DDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGNSSI 713
++R+++FI K+ + + V+ SL+ L + D++LIH P S G+
Sbjct: 62 PKHNLKREDIFITTKMHP--NTVENVKKLVDESLSLLKTSYIDMYLIHYPKSFDYGDQD- 118
Query: 714 PKISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQIQKILDKGK-VKPAVNQV 890
++ ++ + ++ D W + G +S+GVS+F ++++ D GK P NQV
Sbjct: 119 -PMNKTLRIATWN--DLW----ECKNAGKIRSVGVSSFEIRHLEELKDLGKNFPPCCNQV 171
Query: 891 ECHPYLTXXXLHKFXEEKEIILSXFXVL 974
E HP+ T L + + + I F L
Sbjct: 172 EYHPHFTREELKNYCKSEGIFFQAFSSL 199
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 85.0 bits (201), Expect = 9e-17
Identities = 64/213 (30%), Positives = 99/213 (46%)
Frame = +3
Query: 348 VATLKLRXGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 527
+ T L MP+I LGT ++ + GYR IDTA YG EK +G A+KN
Sbjct: 2 IPTTVLSNNVEMPLIGLGTTHSGGYYHDAVLHSIKKCGYRLIDTAKRYGVEKQLGIAVKN 61
Query: 528 KIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGNS 707
+V R+E+F+ KLW D V A + S L ++ D+++IH
Sbjct: 62 C----SVPREEMFLSTKLWPV-DCGDEVYNAFQTSCEKLQTDYLDMYMIH---------- 106
Query: 708 SIPKISSVIQYSEFDYMDAWFGMEDLVAKGLAKSIGVSNFNSTQIQKILDKGKVKPAVNQ 887
+P++ I + W ME L +SIGVSN++ + ++L+ + P NQ
Sbjct: 107 -MPQLPDWIVNQKETKEKTWRQMELLYEDEHVRSIGVSNYSIEDLDELLEFASILPHANQ 165
Query: 888 VECHPYLTXXXLHKFXEEKEIILSXFXVLGSKG 986
VE HP+ L + +E I+ + L +KG
Sbjct: 166 VELHPWFHQADLKNYCDELGILTMGYCPL-AKG 197
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 58.0 bits (134), Expect = 1e-08
Identities = 34/85 (40%), Positives = 44/85 (51%)
Frame = +3
Query: 357 LKLRXGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKID 536
L L MP + LGT V+ A+ GY IDTA Y NE+ IG AIK I
Sbjct: 48 LTLSNAHSMPAVGLGTWQSNAEDVISAVKAAVKNGYSLIDTASGYNNEEFIGTAIKEVIA 107
Query: 537 DGTVRRDELFIMGKLWSTFHRTDLV 611
+G V+R++LFI K+ + F LV
Sbjct: 108 EGVVKREDLFITTKVPNLFSSLRLV 132
>U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical
protein C56G3.2 protein.
Length = 131
Score = 48.4 bits (110), Expect = 1e-05
Identities = 31/88 (35%), Positives = 46/88 (52%)
Frame = +3
Query: 582 WSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGNSSIPKISSVIQYSEFDYMD 761
W+ +E A R SL L LE+ DL+L H P + + S KI S ++ D
Sbjct: 53 WTNELAPGRLEGALRDSLKKLHLEYVDLYLAHMPTAFSDDMSQ--KIESSVE-------D 103
Query: 762 AWFGMEDLVAKGLAKSIGVSNFNSTQIQ 845
W + + GLAK++GVSN+N+ QI+
Sbjct: 104 IWRQFDAVYKAGLAKAVGVSNWNNDQIR 131
>AC006627-8|AAK85458.1| 276|Caenorhabditis elegans Hypothetical
protein E01A2.1 protein.
Length = 276
Score = 40.3 bits (90), Expect = 0.003
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Frame = +3
Query: 708 SIPKISSVIQYSEFDYMDAWFG--------MEDLVAKGLAKSIGVSNFNSTQIQKILDKG 863
S P++ + SE D + WF ME LV SIGVS+F++ Q++ I+D
Sbjct: 119 SFPELDLIDGESEEDENNRWFEKVKPLYTYMEKLVETSEIASIGVSDFSARQLKTIIDHF 178
Query: 864 KVKPAVNQV 890
VKP++N V
Sbjct: 179 DVKPSINHV 187
>Z46828-1|CAA86856.1| 542|Caenorhabditis elegans Hypothetical
protein R03D7.2 protein.
Length = 542
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 752 LHGRLVRHGRPRSERLGQEHRGQQLQFDPDPEDFGQRQSQACRQ 883
LH RL R R RS+R + + QQL+ + ++ +R++ +C++
Sbjct: 41 LHSRLRRRRRSRSQRKQLQWQQQQLRLRKEQQNQSRRRTSSCQK 84
>U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory
abnormality protein14 protein.
Length = 439
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = +3
Query: 432 EIVETAIDMGYRAIDTAYIYG---NEKLIGKAI 521
+IVETAI G IDT Y Y +E ++GKA+
Sbjct: 118 KIVETAIKQGINYIDTGYWYSQSRSESILGKAL 150
>Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical
protein T28F4.4 protein.
Length = 717
Score = 29.1 bits (62), Expect = 6.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -3
Query: 602 GAMECTPQFTHNEKLVSPHGAVVNLVLDRFSYELFVAVNISGIYSSVAHINSSLHYFR 429
G QFT + + GA+ +VL + L +S +++++AH+ SS FR
Sbjct: 422 GDAHINSQFTKEDFVHRTKGAIAKIVLVKERIRLAKVPALSELFNALAHVMSSPENFR 479
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,794,908
Number of Sequences: 27780
Number of extensions: 395801
Number of successful extensions: 1297
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1282
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3265985354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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