Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_H18
         (1196 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF187730-1|AAG17032.1|  159|Drosophila melanogaster eukaryotic t...   281   1e-75
AF159443-1|AAF80375.1|  159|Drosophila melanogaster eukaryotic i...   279   4e-75
AY071396-1|AAL49018.1|  159|Drosophila melanogaster RE47768p pro...   276   4e-74
AE013599-3794|AAM68297.1|  159|Drosophila melanogaster CG3186-PB...   276   4e-74
AE013599-3793|AAF47151.1|  159|Drosophila melanogaster CG3186-PA...   276   4e-74
M28863-1|AAA62770.1|  543|Drosophila melanogaster seven-up prote...    30   5.4  
AY129452-1|AAM76194.1|  543|Drosophila melanogaster RE08410p pro...    30   5.4  
AE014297-1474|AAN13541.1|  746|Drosophila melanogaster CG11502-P...    30   5.4  
AE014297-1473|AAF54773.1|  543|Drosophila melanogaster CG11502-P...    30   5.4  

>AF187730-1|AAG17032.1|  159|Drosophila melanogaster eukaryotic
           translation initiationfactor 5a protein.
          Length = 159

 Score =  281 bits (689), Expect = 1e-75
 Identities = 127/153 (83%), Positives = 139/153 (90%)
 Frame = +2

Query: 203 HFEXGXSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFN 382
           HFE   SGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+VGIDIF+
Sbjct: 7   HFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFS 66

Query: 383 GKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLR 562
            KKYEDICPSTHNMDVP+VKRED QL  ISDD +LTLM D+GDLREDLK+P+G+LG QLR
Sbjct: 67  NKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTDSGDLREDLKVPEGELGEQLR 126

Query: 563 TDFDSGKELLCTVLKSCGEECVIAVKANTALDK 661
            DFDSGK+LLCTVLK+CGEECVIA+K NTALDK
Sbjct: 127 LDFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159


>AF159443-1|AAF80375.1|  159|Drosophila melanogaster eukaryotic
           initiation factor 5A protein.
          Length = 159

 Score =  279 bits (685), Expect = 4e-75
 Identities = 126/153 (82%), Positives = 139/153 (90%)
 Frame = +2

Query: 203 HFEXGXSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFN 382
           HFE   SGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+VGIDIF+
Sbjct: 7   HFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFS 66

Query: 383 GKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLR 562
            KKYEDICPSTHNMDVP+VKRED QL  ISDD +LTLM ++GDLREDLK+P+G+LG QLR
Sbjct: 67  NKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLR 126

Query: 563 TDFDSGKELLCTVLKSCGEECVIAVKANTALDK 661
            DFDSGK+LLCTVLK+CGEECVIA+K NTALDK
Sbjct: 127 LDFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159


>AY071396-1|AAL49018.1|  159|Drosophila melanogaster RE47768p
           protein.
          Length = 159

 Score =  276 bits (677), Expect = 4e-74
 Identities = 125/152 (82%), Positives = 138/152 (90%)
 Frame = +2

Query: 206 FEXGXSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNG 385
           FE   SGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+VGIDIF+ 
Sbjct: 8   FETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSN 67

Query: 386 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRT 565
           KKYEDICPSTHNMDVP+VKRED QL  ISDD +LTLM ++GDLREDLK+P+G+LG QLR 
Sbjct: 68  KKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRL 127

Query: 566 DFDSGKELLCTVLKSCGEECVIAVKANTALDK 661
           DFDSGK+LLCTVLK+CGEECVIA+K NTALDK
Sbjct: 128 DFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159


>AE013599-3794|AAM68297.1|  159|Drosophila melanogaster CG3186-PB,
           isoform B protein.
          Length = 159

 Score =  276 bits (677), Expect = 4e-74
 Identities = 125/152 (82%), Positives = 138/152 (90%)
 Frame = +2

Query: 206 FEXGXSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNG 385
           FE   SGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+VGIDIF+ 
Sbjct: 8   FETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSN 67

Query: 386 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRT 565
           KKYEDICPSTHNMDVP+VKRED QL  ISDD +LTLM ++GDLREDLK+P+G+LG QLR 
Sbjct: 68  KKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRL 127

Query: 566 DFDSGKELLCTVLKSCGEECVIAVKANTALDK 661
           DFDSGK+LLCTVLK+CGEECVIA+K NTALDK
Sbjct: 128 DFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159


>AE013599-3793|AAF47151.1|  159|Drosophila melanogaster CG3186-PA,
           isoform A protein.
          Length = 159

 Score =  276 bits (677), Expect = 4e-74
 Identities = 125/152 (82%), Positives = 138/152 (90%)
 Frame = +2

Query: 206 FEXGXSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNG 385
           FE   SGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+VGIDIF+ 
Sbjct: 8   FETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSN 67

Query: 386 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRT 565
           KKYEDICPSTHNMDVP+VKRED QL  ISDD +LTLM ++GDLREDLK+P+G+LG QLR 
Sbjct: 68  KKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRL 127

Query: 566 DFDSGKELLCTVLKSCGEECVIAVKANTALDK 661
           DFDSGK+LLCTVLK+CGEECVIA+K NTALDK
Sbjct: 128 DFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159


>M28863-1|AAA62770.1|  543|Drosophila melanogaster seven-up protein
           type 1 protein.
          Length = 543

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 321 HPKPESTATLKFTWLGLISSMVKSMKISVPPHTTWTYP 434
           +P+P+S A L    +GL     +SM + VPPH+ W  P
Sbjct: 13  NPRPQSGAELSAFDIGLS----RSMGLGVPPHSAWHEP 46


>AY129452-1|AAM76194.1|  543|Drosophila melanogaster RE08410p
           protein.
          Length = 543

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 321 HPKPESTATLKFTWLGLISSMVKSMKISVPPHTTWTYP 434
           +P+P+S A L    +GL     +SM + VPPH+ W  P
Sbjct: 13  NPRPQSGAELSAFDIGLS----RSMGLGVPPHSAWHEP 46


>AE014297-1474|AAN13541.1|  746|Drosophila melanogaster CG11502-PA,
           isoform A protein.
          Length = 746

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 321 HPKPESTATLKFTWLGLISSMVKSMKISVPPHTTWTYP 434
           +P+P+S A L    +GL     +SM + VPPH+ W  P
Sbjct: 13  NPRPQSGAELSAFDIGLS----RSMGLGVPPHSAWHEP 46


>AE014297-1473|AAF54773.1|  543|Drosophila melanogaster CG11502-PB,
           isoform B protein.
          Length = 543

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 321 HPKPESTATLKFTWLGLISSMVKSMKISVPPHTTWTYP 434
           +P+P+S A L    +GL     +SM + VPPH+ W  P
Sbjct: 13  NPRPQSGAELSAFDIGLS----RSMGLGVPPHSAWHEP 46


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,672,306
Number of Sequences: 53049
Number of extensions: 848358
Number of successful extensions: 1995
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1995
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6336035655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)