Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_H18
         (1196 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49967-1|CAA90247.1|  161|Caenorhabditis elegans Hypothetical pr...   190   1e-48
Z27079-13|CAA81597.2|  195|Caenorhabditis elegans Hypothetical p...   187   2e-47
CU457743-2|CAM36365.1|  695|Caenorhabditis elegans Hypothetical ...    31   1.6  
Z74031-2|CAA98454.2|  568|Caenorhabditis elegans Hypothetical pr...    29   8.6  

>Z49967-1|CAA90247.1|  161|Caenorhabditis elegans Hypothetical
           protein F54C9.1 protein.
          Length = 161

 Score =  190 bits (464), Expect = 1e-48
 Identities = 92/151 (60%), Positives = 114/151 (75%), Gaps = 2/151 (1%)
 Frame = +2

Query: 203 HFEXGXSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFN 382
           HF  G SGA+ATFP QCSALRKN  VM+KGRPCKIVEMSTSKTGKHGHAKVH+V IDIF 
Sbjct: 10  HFHTGDSGAAATFPKQCSALRKNEHVMIKGRPCKIVEMSTSKTGKHGHAKVHMVAIDIFT 69

Query: 383 GKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLM-ADNGDLREDLKIPDGDLGTQL 559
            KK EDICPSTHNMDVP VKR +Y L  I DDGY +LM  ++ + ++DLK+PD +LG Q+
Sbjct: 70  SKKLEDICPSTHNMDVPVVKRREYLLMAI-DDGYCSLMDPESCEQKDDLKLPDTELGQQI 128

Query: 560 RTDFDSGK-ELLCTVLKSCGEECVIAVKANT 649
           R  ++  +  +L  V+ + GEE ++  K +T
Sbjct: 129 RDAYEKDEGSVLVQVVSAIGEEAILGWKVST 159


>Z27079-13|CAA81597.2|  195|Caenorhabditis elegans Hypothetical
           protein T05G5.10 protein.
          Length = 195

 Score =  187 bits (455), Expect = 2e-47
 Identities = 89/150 (59%), Positives = 114/150 (76%), Gaps = 2/150 (1%)
 Frame = +2

Query: 206 FEXGXSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNG 385
           F+   SGA+ATFP QCSALRKN  VM++GRPCKIVEMSTSKTGKHGHAKVH+V IDIF  
Sbjct: 45  FDSAESGAAATFPKQCSALRKNEHVMIRGRPCKIVEMSTSKTGKHGHAKVHMVAIDIFTT 104

Query: 386 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLM-ADNGDLREDLKIPDGDLGTQLR 562
           KK EDICPSTHNMDVP VKR +Y L  I +DG+ +LM  ++ +L++DLK+P+GDLG  +R
Sbjct: 105 KKLEDICPSTHNMDVPVVKRREYILMSI-EDGFCSLMDPESCELKDDLKMPEGDLGNTIR 163

Query: 563 TDFDSGK-ELLCTVLKSCGEECVIAVKANT 649
              +  +  +L  V+ +CGEE ++  K +T
Sbjct: 164 EALEKDEGSVLVQVVAACGEEAILGYKIST 193


>CU457743-2|CAM36365.1|  695|Caenorhabditis elegans Hypothetical
           protein K09E10.2 protein.
          Length = 695

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
 Frame = +2

Query: 419 NMDVPHVKREDYQLTDI--SDDGYLTLMADNGDLREDLKIPDGDLGTQLRTD-FDSGKEL 589
           N  +P +K++ Y L     ++ GY+  +   GDL+   KI D      LR D ++ G+  
Sbjct: 573 NKFIPFIKKKLYILDSFPRANSGYIARVP--GDLKNGKKIEDISKA-MLRPDGYERGRLR 629

Query: 590 LCTVLKSCGEEC 625
              ++K CG++C
Sbjct: 630 HAALVKECGDKC 641


>Z74031-2|CAA98454.2|  568|Caenorhabditis elegans Hypothetical
           protein F32D8.2 protein.
          Length = 568

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
 Frame = +2

Query: 374 IFNGKKYEDICPSTHNMDVPHVKREDYQLT------DISDDGYLTLMADN-GDLREDLK 529
           IF   + ED+   T +    H+ R + ++       D+S DGYLTL + N  DL  D++
Sbjct: 74  IFFPNEDEDVFGLTPDKSKQHIVRGECKINELNEKVDLSSDGYLTLRSKNTNDLPSDIR 132


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,102,609
Number of Sequences: 27780
Number of extensions: 427451
Number of successful extensions: 1064
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1064
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3286854270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)