Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_H14
         (1234 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_02_0061 + 7904260-7904824,7904935-7905470,7906184-7906861           29   5.7  
05_07_0289 + 29004842-29005213,29005318-29005605,29005707-290058...    29   9.9  

>11_02_0061 + 7904260-7904824,7904935-7905470,7906184-7906861
          Length = 592

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +1

Query: 88  ASAGRVFVARLPLGXALSTPXRAGAAFSWXSAGVQTV 198
           A+A R+   +LP   ALSTP R  AA +    G Q+V
Sbjct: 454 AAAARLGYEKLPPSSALSTPLRKAAATAGSGRGKQSV 490


>05_07_0289 +
           29004842-29005213,29005318-29005605,29005707-29005853,
           29005939-29006175,29006261-29006524,29006609-29006725,
           29006991-29007042,29007903-29008303,29008380-29008598,
           29008692-29008925
          Length = 776

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 176 CHEKAAPARXGVDRAXPSGSRATXTLPADAERKTD 72
           C   A+PA+ G  +  P    A+ T  ADAER+ +
Sbjct: 45  CSALASPAKQGTAKLPPPQPTASRTAAADAERERE 79


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,432,621
Number of Sequences: 37544
Number of extensions: 140657
Number of successful extensions: 187
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3794526552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)