Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_H13
(1223 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a pr... 143 1e-33
U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a pr... 143 1e-33
L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens (c... 143 1e-33
BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a ... 143 1e-33
BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a ... 143 1e-33
AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A ... 143 1e-33
U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a pr... 139 2e-32
BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein. 127 7e-29
BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein. 127 7e-29
BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein. 127 7e-29
AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein. 127 7e-29
AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L... 115 4e-25
BC105600-1|AAI05601.1| 121|Homo sapiens MGC70863 protein protein. 105 3e-22
BC065556-1|AAH65556.1| 121|Homo sapiens similar to RPL23AP7 pro... 105 4e-22
AL844851-8|CAM25789.1| 123|Homo sapiens major histocompatibilit... 51 1e-05
AL844851-6|CAI18575.2| 442|Homo sapiens major histocompatibilit... 51 1e-05
AL669813-9|CAM24949.1| 123|Homo sapiens major histocompatibilit... 51 1e-05
AL669813-7|CAI17628.1| 442|Homo sapiens major histocompatibilit... 51 1e-05
AL645939-8|CAM25440.1| 123|Homo sapiens major histocompatibilit... 51 1e-05
AL645939-6|CAI18086.2| 442|Homo sapiens major histocompatibilit... 51 1e-05
AL022723-13|CAI20359.1| 442|Homo sapiens major histocompatibili... 51 1e-05
BX005428-8|CAM26185.1| 123|Homo sapiens major histocompatibilit... 47 1e-04
BX005428-6|CAM26183.1| 442|Homo sapiens major histocompatibilit... 47 1e-04
BC009260-1|AAH09260.2| 460|Homo sapiens HLA-F protein protein. 47 1e-04
AK125274-1|BAC86108.1| 349|Homo sapiens protein ( Homo sapiens ... 43 0.003
BC060042-1|AAH60042.1| 81|Homo sapiens LOC649946 protein protein. 39 0.042
BC017930-1|AAH17930.1| 81|Homo sapiens LOC649946 protein protein. 39 0.042
>U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 143 bits (346), Expect = 1e-33
Identities = 69/104 (66%), Positives = 79/104 (75%)
Frame = +2
Query: 692 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 871
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 872 PLTSEAAMKKIEDNNTLVFIVHTSANKHXIKXXVXKLYDIXVVK 1003
PLT+E+AMKKIEDNNTLVFIV ANKH IK V KLYDI V K
Sbjct: 80 PLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAK 123
>U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 143 bits (346), Expect = 1e-33
Identities = 69/104 (66%), Positives = 79/104 (75%)
Frame = +2
Query: 692 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 871
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 872 PLTSEAAMKKIEDNNTLVFIVHTSANKHXIKXXVXKLYDIXVVK 1003
PLT+E+AMKKIEDNNTLVFIV ANKH IK V KLYDI V K
Sbjct: 80 PLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAK 123
>L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens (clone
01) liver expressed protein mRNA, 3'end. ).
Length = 147
Score = 143 bits (346), Expect = 1e-33
Identities = 69/104 (66%), Positives = 79/104 (75%)
Frame = +2
Query: 692 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 871
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 11 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 70
Query: 872 PLTSEAAMKKIEDNNTLVFIVHTSANKHXIKXXVXKLYDIXVVK 1003
PLT+E+AMKKIEDNNTLVFIV ANKH IK V KLYDI V K
Sbjct: 71 PLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAK 114
>BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 143 bits (346), Expect = 1e-33
Identities = 69/104 (66%), Positives = 79/104 (75%)
Frame = +2
Query: 692 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 871
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 872 PLTSEAAMKKIEDNNTLVFIVHTSANKHXIKXXVXKLYDIXVVK 1003
PLT+E+AMKKIEDNNTLVFIV ANKH IK V KLYDI V K
Sbjct: 80 PLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAK 123
>BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 143 bits (346), Expect = 1e-33
Identities = 69/104 (66%), Positives = 79/104 (75%)
Frame = +2
Query: 692 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 871
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 872 PLTSEAAMKKIEDNNTLVFIVHTSANKHXIKXXVXKLYDIXVVK 1003
PLT+E+AMKKIEDNNTLVFIV ANKH IK V KLYDI V K
Sbjct: 80 PLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAK 123
>AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A
protein.
Length = 156
Score = 143 bits (346), Expect = 1e-33
Identities = 69/104 (66%), Positives = 79/104 (75%)
Frame = +2
Query: 692 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 871
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 872 PLTSEAAMKKIEDNNTLVFIVHTSANKHXIKXXVXKLYDIXVVK 1003
PLT+E+AMKKIEDNNTLVFIV ANKH IK V KLYDI V K
Sbjct: 80 PLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAK 123
>U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 139 bits (336), Expect = 2e-32
Identities = 67/104 (64%), Positives = 77/104 (74%)
Frame = +2
Query: 692 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 871
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y II F
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIINF 79
Query: 872 PLTSEAAMKKIEDNNTLVFIVHTSANKHXIKXXVXKLYDIXVVK 1003
PLT+E+AMKKIEDNNTLVFIV ANKH I V KLYDI V K
Sbjct: 80 PLTTESAMKKIEDNNTLVFIVDVKANKHQISQAVKKLYDIDVAK 123
>BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 127 bits (307), Expect = 7e-29
Identities = 63/104 (60%), Positives = 76/104 (73%)
Frame = +2
Query: 692 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 871
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 872 PLTSEAAMKKIEDNNTLVFIVHTSANKHXIKXXVXKLYDIXVVK 1003
PLT+E AMKKI+DNNTLVF V ANKH IK V KL DI K
Sbjct: 80 PLTTEFAMKKIKDNNTLVFTVDVKANKHQIKQAVKKLCDIDGAK 123
>BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 127 bits (307), Expect = 7e-29
Identities = 63/104 (60%), Positives = 76/104 (73%)
Frame = +2
Query: 692 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 871
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 872 PLTSEAAMKKIEDNNTLVFIVHTSANKHXIKXXVXKLYDIXVVK 1003
PLT+E AMKKI+DNNTLVF V ANKH IK V KL DI K
Sbjct: 80 PLTTEFAMKKIKDNNTLVFTVDVKANKHQIKQAVKKLCDIDGAK 123
>BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 127 bits (307), Expect = 7e-29
Identities = 63/104 (60%), Positives = 76/104 (73%)
Frame = +2
Query: 692 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 871
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 872 PLTSEAAMKKIEDNNTLVFIVHTSANKHXIKXXVXKLYDIXVVK 1003
PLT+E AMKKI+DNNTLVF V ANKH IK V KL DI K
Sbjct: 80 PLTTEFAMKKIKDNNTLVFTVDVKANKHQIKQAVKKLCDIDGAK 123
>AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein.
Length = 130
Score = 127 bits (307), Expect = 7e-29
Identities = 63/104 (60%), Positives = 76/104 (73%)
Frame = +2
Query: 692 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 871
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 872 PLTSEAAMKKIEDNNTLVFIVHTSANKHXIKXXVXKLYDIXVVK 1003
PLT+E AMKKI+DNNTLVF V ANKH IK V KL DI K
Sbjct: 80 PLTTEFAMKKIKDNNTLVFTVDVKANKHQIKQAVKKLCDIDGAK 123
>AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L23A
like protein.
Length = 156
Score = 115 bits (276), Expect = 4e-25
Identities = 53/99 (53%), Positives = 70/99 (70%)
Frame = +2
Query: 692 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 871
KALKA++ +KG H +K R S+ F+RPKT R P+YP KS P+RN++ Y +IKF
Sbjct: 20 KALKAKKAALKGVHSHIKKKTRTSLTFQRPKTLRRRRRPEYPWKSTPRRNKLGHYAVIKF 79
Query: 872 PLTSEAAMKKIEDNNTLVFIVHTSANKHXIKXXVXKLYD 988
PLT+E+A+K+ E+NNTL+F V ANKH IK V KLYD
Sbjct: 80 PLTTESAVKRTEENNTLLFTVDVKANKHQIKQAVKKLYD 118
>BC105600-1|AAI05601.1| 121|Homo sapiens MGC70863 protein protein.
Length = 121
Score = 105 bits (252), Expect = 3e-22
Identities = 49/81 (60%), Positives = 60/81 (74%)
Frame = +2
Query: 761 SVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHT 940
S+ FRRPKT R P+YP+KS P+RN++ Y IIKFPLT+E+A+KKIE+NNTLVF V
Sbjct: 2 SLTFRRPKTLRLRRQPRYPQKSTPRRNKLGHYAIIKFPLTTESAVKKIEENNTLVFTVDV 61
Query: 941 SANKHXIKXXVXKLYDIXVVK 1003
ANKH I+ V KLYD V K
Sbjct: 62 KANKHQIRQAVKKLYDSDVAK 82
>BC065556-1|AAH65556.1| 121|Homo sapiens similar to RPL23AP7 protein
protein.
Length = 121
Score = 105 bits (251), Expect = 4e-22
Identities = 49/81 (60%), Positives = 59/81 (72%)
Frame = +2
Query: 761 SVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHT 940
S+ FRRPKT R P+YPRKS P+RN++ Y IIKFPL +E+A+KKIE+NNTLVF V
Sbjct: 2 SLTFRRPKTLRLRRQPRYPRKSTPRRNKLGHYAIIKFPLATESAVKKIEENNTLVFTVDV 61
Query: 941 SANKHXIKXXVXKLYDIXVVK 1003
ANKH I+ V KLYD V K
Sbjct: 62 KANKHQIRQAVKKLYDSDVAK 82
>AL844851-8|CAM25789.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 50.8 bits (116), Expect = 1e-05
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -3
Query: 891 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 712
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 27 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 86
Query: 711 L*ALSALVTGF 679
AL +L GF
Sbjct: 87 FLALQSLRFGF 97
>AL844851-6|CAI18575.2| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 50.8 bits (116), Expect = 1e-05
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -3
Query: 891 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 712
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 711 L*ALSALVTGF 679
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>AL669813-9|CAM24949.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 50.8 bits (116), Expect = 1e-05
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -3
Query: 891 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 712
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 27 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 86
Query: 711 L*ALSALVTGF 679
AL +L GF
Sbjct: 87 FLALQSLRFGF 97
>AL669813-7|CAI17628.1| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 50.8 bits (116), Expect = 1e-05
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -3
Query: 891 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 712
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 711 L*ALSALVTGF 679
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>AL645939-8|CAM25440.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 50.8 bits (116), Expect = 1e-05
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -3
Query: 891 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 712
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 27 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 86
Query: 711 L*ALSALVTGF 679
AL +L GF
Sbjct: 87 FLALQSLRFGF 97
>AL645939-6|CAI18086.2| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 50.8 bits (116), Expect = 1e-05
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -3
Query: 891 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 712
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 711 L*ALSALVTGF 679
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>AL022723-13|CAI20359.1| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 50.8 bits (116), Expect = 1e-05
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -3
Query: 891 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 712
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 711 L*ALSALVTGF 679
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>BX005428-8|CAM26185.1| 123|Homo sapiens major histocompatibility
complex class I F protein.
Length = 123
Score = 47.2 bits (107), Expect = 1e-04
Identities = 32/71 (45%), Positives = 39/71 (54%)
Frame = -3
Query: 891 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 712
A S V G LM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 27 AYSVVSGLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 86
Query: 711 L*ALSALVTGF 679
AL +L GF
Sbjct: 87 FLALQSLRFGF 97
>BX005428-6|CAM26183.1| 442|Homo sapiens major histocompatibility
complex class I F protein.
Length = 442
Score = 47.2 bits (107), Expect = 1e-04
Identities = 32/71 (45%), Positives = 39/71 (54%)
Frame = -3
Query: 891 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 712
A S V G LM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 711 L*ALSALVTGF 679
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>BC009260-1|AAH09260.2| 460|Homo sapiens HLA-F protein protein.
Length = 460
Score = 47.2 bits (107), Expect = 1e-04
Identities = 32/71 (45%), Positives = 39/71 (54%)
Frame = -3
Query: 891 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 712
A S V G LM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 364 AYSVVSGLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 423
Query: 711 L*ALSALVTGF 679
AL +L GF
Sbjct: 424 FLALQSLRFGF 434
>AK125274-1|BAC86108.1| 349|Homo sapiens protein ( Homo sapiens
cDNA FLJ43284 fis, clone LYMPB2000083, highly similar
to HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, ALPHA CHAIN F
PRECURSOR. ).
Length = 349
Score = 42.7 bits (96), Expect = 0.003
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = -3
Query: 891 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRI 751
A S V GNLM+ S FLLG F GYLGCL +VLG RK L +
Sbjct: 260 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKAQLLSV 306
>BC060042-1|AAH60042.1| 81|Homo sapiens LOC649946 protein protein.
Length = 81
Score = 38.7 bits (86), Expect = 0.042
Identities = 21/37 (56%), Positives = 22/37 (59%)
Frame = +2
Query: 893 MKKIEDNNTLVFIVHTSANKHXIKXXVXKLYDIXVVK 1003
MKK EDNN LVF V+ ANKH KLYD V K
Sbjct: 1 MKKTEDNNALVFTVNVKANKHQ-----KKLYDTDVAK 32
>BC017930-1|AAH17930.1| 81|Homo sapiens LOC649946 protein protein.
Length = 81
Score = 38.7 bits (86), Expect = 0.042
Identities = 21/37 (56%), Positives = 22/37 (59%)
Frame = +2
Query: 893 MKKIEDNNTLVFIVHTSANKHXIKXXVXKLYDIXVVK 1003
MKK EDNN LVF V+ ANKH KLYD V K
Sbjct: 1 MKKTEDNNALVFTVNVKANKHQ-----KKLYDTDVAK 32
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,466,711
Number of Sequences: 237096
Number of extensions: 1488402
Number of successful extensions: 7501
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 7295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7497
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17339562450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -