Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_H13
         (1223 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p pro...   154   3e-37
AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA ...   154   3e-37
DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosom...   152   8e-37
AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal pr...   147   2e-35
BT021430-1|AAX33578.1|  290|Drosophila melanogaster GM06171p pro...    36   0.085
BT003457-1|AAO39460.1|  985|Drosophila melanogaster RH34107p pro...    31   4.2  
AE014297-1126|AAF54512.1|  985|Drosophila melanogaster CG3999-PA...    31   4.2  

>BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p protein.
          Length = 269

 Score =  154 bits (373), Expect = 3e-37
 Identities = 70/103 (67%), Positives = 82/103 (79%)
 Frame = +2

Query: 695  ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 874
            A K Q+K++KG  G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 134  AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193

Query: 875  LTSEAAMKKIEDNNTLVFIVHTSANKHXIKXXVXKLYDIXVVK 1003
            LT+EAAMKKIEDNNTLVF+ H  ANK+ ++  V KLYDI V K
Sbjct: 194  LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAK 236


>AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA
            protein.
          Length = 277

 Score =  154 bits (373), Expect = 3e-37
 Identities = 70/103 (67%), Positives = 82/103 (79%)
 Frame = +2

Query: 695  ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 874
            A K Q+K++KG  G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 142  AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201

Query: 875  LTSEAAMKKIEDNNTLVFIVHTSANKHXIKXXVXKLYDIXVVK 1003
            LT+EAAMKKIEDNNTLVF+ H  ANK+ ++  V KLYDI V K
Sbjct: 202  LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAK 244


>DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosomal
            protein naturalvariant protein.
          Length = 277

 Score =  152 bits (369), Expect = 8e-37
 Identities = 70/103 (67%), Positives = 81/103 (78%)
 Frame = +2

Query: 695  ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 874
            A K Q+K++KG  G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 142  AKKVQKKIIKGAFGTRARKIRANVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201

Query: 875  LTSEAAMKKIEDNNTLVFIVHTSANKHXIKXXVXKLYDIXVVK 1003
            LT+EAAMKKIEDNNTLVF+ H  ANK  ++  V KLYDI V K
Sbjct: 202  LTTEAAMKKIEDNNTLVFLTHLRANKSHVRAAVRKLYDIKVAK 244


>AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal protein
            L23a protein.
          Length = 269

 Score =  147 bits (357), Expect = 2e-35
 Identities = 69/103 (66%), Positives = 81/103 (78%)
 Frame = +2

Query: 695  ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 874
            A K Q+K++K   G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 135  AKKVQKKIIKA-FGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193

Query: 875  LTSEAAMKKIEDNNTLVFIVHTSANKHXIKXXVXKLYDIXVVK 1003
            LT+EAAMKKIEDNNTLVF+ H  ANK+ ++  V KLYDI V K
Sbjct: 194  LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAK 236


>BT021430-1|AAX33578.1|  290|Drosophila melanogaster GM06171p
           protein.
          Length = 290

 Score = 36.3 bits (80), Expect = 0.085
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +1

Query: 811 IPKEVSA*EKSHGCLQHH*IPSHV*SSNEED*R*QHLGL 927
           +P+E+ A ++ HG +QHH +P+     +EED   QH GL
Sbjct: 163 VPQEIGAHQEPHGRVQHHQVPTDHRGGHEEDRGQQHPGL 201


>BT003457-1|AAO39460.1|  985|Drosophila melanogaster RH34107p
           protein.
          Length = 985

 Score = 30.7 bits (66), Expect = 4.2
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 733 MFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 641
           M+  Y+ P  LK  +NR H+F L+L   + G
Sbjct: 368 MYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398


>AE014297-1126|AAF54512.1|  985|Drosophila melanogaster CG3999-PA
           protein.
          Length = 985

 Score = 30.7 bits (66), Expect = 4.2
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 733 MFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 641
           M+  Y+ P  LK  +NR H+F L+L   + G
Sbjct: 368 MYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,038,326
Number of Sequences: 53049
Number of extensions: 429252
Number of successful extensions: 1413
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1411
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6519393600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)