Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_H11
(1234 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP16F5.06 |||ribosome biogenesis protein Nop6|Schizosaccharomy... 59 1e-09
SPAC57A7.04c |pabp||mRNA export shuttling protein |Schizosacchar... 52 1e-07
SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyce... 48 3e-06
SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 41 3e-04
SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces... 40 0.001
SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomy... 40 0.001
SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces po... 38 0.003
SPCC306.04c |set1||histone lysine methyltransferase Set1|Schizos... 38 0.003
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 38 0.004
SPAC16.02c |srp2||mRNA export factor Srp2|Schizosaccharomyces po... 37 0.007
SPBC887.05c |cwf29||RNA-binding protein Cwf29|Schizosaccharomyce... 37 0.007
SPBC660.15 |||mRNA cleavage factor complex subunit |Schizosaccha... 36 0.012
SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 35 0.020
SPCC74.09 |mug24||RNA-binding protein, rrm type|Schizosaccharomy... 35 0.027
SPBC18H10.03 |tif35||translation initiation factor eIF3g|Schizos... 35 0.027
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 33 0.081
SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protei... 33 0.11
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.25
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 31 0.25
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 31 0.25
SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 31 0.25
SPCC1795.06 |map2||P-factor |Schizosaccharomyces pombe|chr 3|||M... 31 0.33
SPCC1827.05c |||nucleolar RNA-binding protein NIFK |Schizosaccha... 31 0.43
SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces p... 30 0.76
SPBC1289.12 |usp109||U1 snRNP-associated protein Usp109|Schizosa... 30 0.76
SPBC119.12 |||Golgi matrix protein |Schizosaccharomyces pombe|ch... 30 0.76
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.76
SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyce... 29 1.0
SPBC29A10.02 |spo5|mrb1, mug12, SPBC365.18|meiotic RNA-binding p... 29 1.0
SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 1.3
SPAC6F12.03c |fsv1||SNARE Fsv1|Schizosaccharomyces pombe|chr 1||... 29 1.8
SPCC1020.12c ||SPCC14G10.06|xap-5-like protein|Schizosaccharomyc... 29 1.8
SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces ... 28 3.1
SPAC18G6.05c |||translation elongation regulator Gcn1 |Schizosac... 28 3.1
SPBC2A9.11c ||SPBC2D10.01c|nuclear export factor|Schizosaccharom... 28 3.1
SPBC646.12c |gap1|src1, sar1|GTPase activating protein Gap1|Schi... 28 3.1
SPAC2F7.11 |nrd1|msa2|RNA-binding protein Nrd1|Schizosaccharomyc... 27 4.0
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 27 4.0
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 27 5.3
SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 27 5.3
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 27 5.3
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 5.3
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 27 5.3
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 27 7.1
SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr 1|||... 27 7.1
SPAC4D7.10c |||SAGA complex subunit Spt20 |Schizosaccharomyces p... 26 9.3
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 26 9.3
SPCC16C4.19 ||SPCC5E4.08|RNase MRP|Schizosaccharomyces pombe|chr... 26 9.3
SPAC3C7.12 |tip1|noc1|CLIP170 family protein Tip1|Schizosaccharo... 26 9.3
>SPBP16F5.06 |||ribosome biogenesis protein Nop6|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 478
Score = 58.8 bits (136), Expect = 1e-09
Identities = 39/144 (27%), Positives = 73/144 (50%), Gaps = 5/144 (3%)
Frame = +2
Query: 152 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSS-IEENKTFAFITLSASNYDIESCI 328
R++V + + +L FS+FG V++L++ KS+ + + FA++ + C
Sbjct: 6 RIYVGGLSSSIESSDLESRFSRFGSVSNLEIINKSTPVGTIQRFAYLNFRTDEDKWQKCK 65
Query: 329 KCFTSEEFKGSRLYVTRARESFLERLQRERNEAQRKET---EKEQQHET-IPNQNPIINL 496
++ FKGS+L + AR +L +LQ+E+ A + T EK + H + + ++P+ +
Sbjct: 66 SYLSNATFKGSKLRIEEARPYYLVKLQQEKKIADLQSTNNDEKNEDHSSKVDLEDPVFH- 124
Query: 497 SEKLNPRKRKFESHVVNTYSDTEQ 568
E + P K VV T SD +
Sbjct: 125 GEIIVPGKHSKNMQVV-TDSDVRK 147
>SPAC57A7.04c |pabp||mRNA export shuttling protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 653
Score = 52.4 bits (120), Expect = 1e-07
Identities = 49/221 (22%), Positives = 104/221 (47%), Gaps = 16/221 (7%)
Frame = +2
Query: 149 TRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCI 328
T +++ N+ E E F +FG++ SL L K ++ + F F+ A++ + +
Sbjct: 261 TNVYIKNLDTEITEQEFSDLFGQFGEITSLSL-VKDQNDKPRGFGFVNY-ANHECAQKAV 318
Query: 329 KCFTSEEFKGSRLYVTRARESFLERLQRERNEAQRKETEKEQQHETIPNQNPIINLSEKL 508
+E+KG +LYV RA++ ER + R ++ + EK +++ + I NL +++
Sbjct: 319 DELNDKEYKGKKLYVGRAQKKH-EREEELRKRYEQMKLEKMNKYQGV--NLFIKNLQDEV 375
Query: 509 NPRKRKFESHVVNTYSD----TEQQHE---------TIPNQ--NPIINLSEKLNPRKRKF 643
+ + K E T + T++Q + T P + + +++++ K +
Sbjct: 376 DDERLKAEFSAFGTITSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLY 435
Query: 644 ESHVVNTYSDTEKKRLEAMKQKRQEFK-QKQMIIKTGLSAV 763
+ + + + +LEA Q R +F+ Q+Q+ G+ AV
Sbjct: 436 VA--LAQRKEVRRSQLEAQIQARNQFRLQQQVAAAAGIPAV 474
>SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 297
Score = 48.0 bits (109), Expect = 3e-06
Identities = 29/82 (35%), Positives = 42/82 (51%)
Frame = +2
Query: 146 GTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESC 325
G LFVS I EDEL+ FSKFG V + + + + ++ F F++ S + S
Sbjct: 100 GNDLFVSGIASRMQEDELQQIFSKFGTVTHVRIMREPVTKASRGFGFLSFSTVE-EATSA 158
Query: 326 IKCFTSEEFKGSRLYVTRARES 391
I S+EF G L V +A+ S
Sbjct: 159 IDNLNSQEFYGRVLNVQKAKRS 180
>SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 674
Score = 41.1 bits (92), Expect = 3e-04
Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 1/132 (0%)
Frame = +2
Query: 137 MSPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDI 316
M+ + LFV N+ T +D+L FS G + + EN+ + F+T S D
Sbjct: 1 MNSNSTLFVRNLAFQTKQDDLTNFFSDVGPIKHAVVVTNPETGENRGYGFVTFSMLE-DA 59
Query: 317 ESCIKCFTSEEFKGSRLYVTRARESFLERLQRERNEAQRKETEKEQQHETIPNQNP-IIN 493
+ K +++ G L + A + ++N+A +K ++ + I P I
Sbjct: 60 QRAAKELKNKKLHGRILRLDFATPRKRSEVDTDQNKAVKKTIRQDNRPRLIIRNLPWSIK 119
Query: 494 LSEKLNPRKRKF 529
+ L P KF
Sbjct: 120 KPQHLEPHFSKF 131
Score = 29.5 bits (63), Expect = 1.0
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Frame = +2
Query: 152 RLFVSNIPENTNEDE-LRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCI 328
RL + N+P + + + L FSKFGKV + + K FAF+ + E +
Sbjct: 108 RLIIRNLPWSIKKPQHLEPHFSKFGKVREIKIPTKGG-GRMCGFAFVWMK-DRKAAEEAM 165
Query: 329 KCFTSEEFKGSRLYVTRA--RESF-LERLQRERNEAQRKETEKEQQHETI 469
E G + V A +++F L+ +E + KE ++ H +
Sbjct: 166 NSLNGTEIDGRPIAVDWAVSKDAFEATTLKDASSEEENKEFVSDEGHSIV 215
>SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 609
Score = 39.5 bits (88), Expect = 0.001
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Frame = +2
Query: 155 LFVSNIPENT--NEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCI 328
LFV N+ +N N +L FSKFG++ S L S E +K + F++ S ++ I
Sbjct: 421 LFVKNLDDNIVGNTQQLEELFSKFGRIKSCTLASYPSTEISKGYGFVSFS-HPFEAVQAI 479
Query: 329 KCFTSEEFKGSRLYVTRA--RESFLERL 406
F RL+V A RE +RL
Sbjct: 480 NTLNGVLFGKKRLFVNYAEKREDRKKRL 507
Score = 33.5 bits (73), Expect = 0.062
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 7/105 (6%)
Frame = +2
Query: 155 LFVSNIPENTNEDELRCAFSKFGKVNSLDL----KCKSSIEENKT-FAFITLSASNYDIE 319
++V N+P +L F FG + + K KS+ ++ T FAFIT + +
Sbjct: 22 IYVGNLPSTCQSSDLHELFEPFGNFSKFHMLSRKKNKSTDSKSPTLFAFITFE-NKCSAD 80
Query: 320 SCIKCFTSEEFKGSRLYV--TRARESFLERLQRERNEAQRKETEK 448
+ I F+G+ L V T E + +L+ ++ EK
Sbjct: 81 NAIASLNGSSFQGNTLKVEYTHIVERYKNKLENGVDQIHHSNNEK 125
>SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 667
Score = 39.5 bits (88), Expect = 0.001
Identities = 29/156 (18%), Positives = 68/156 (43%), Gaps = 6/156 (3%)
Frame = +2
Query: 395 LERLQRERN-----EAQRKETEKEQQHETIPNQNPIINLSEKLNPRKRKFESHVVNTYSD 559
L +LQR+R EA E++++ + + + ++N+ E L S + S+
Sbjct: 17 LRKLQRQRQTELLEEALDSESDEDDEFSSTSGKK-VVNVFEILEKENNAINSEAEKSVSE 75
Query: 560 TEQQHETIPNQNPIINLSEKLNPRKRKFESHVVNTYSDTEKKRLEAMKQKRQEFKQKQMI 739
EQ + ++PI++ ++K +K+K + + ++ ++ E +
Sbjct: 76 EEQDEPLVEGESPIVSTNKKAKNKKKKKKQQKKKKVTGKRDLDNQSSDNEKLEGLESSKN 135
Query: 740 IKTGLSAVDKLPNK-KVKFSDEDSSILVNDFEDGKT 844
I + ++K + K+K+ ++D V E+ T
Sbjct: 136 IDDDIDEIEKAAAELKLKYREQDQVEHVAGVEESAT 171
>SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 833
Score = 37.9 bits (84), Expect = 0.003
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Frame = +2
Query: 137 MSPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDI 316
+S RLF+ N+ + ED+L+ F FG++ + + K FA+I ++ +
Sbjct: 319 ISETKRLFLRNLTYSCAEDDLKSLFGPFGQLEQVHMPIDKKTNNPKGFAYIDFHDADDAV 378
Query: 317 ESCIKCFTSEEFKGSRLYV--TRARESFL 397
+ ++ ++ F+G L+V +AR S L
Sbjct: 379 RAYLE-LDAKPFQGRLLHVLPAKARSSIL 406
Score = 26.6 bits (56), Expect = 7.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 155 LFVSNIPENTNEDELRCAFSKFGKVNSL 238
L V N P T+ +EL FS FG++ +
Sbjct: 508 LLVKNFPYGTSAEELTSLFSPFGELGRI 535
Score = 26.6 bits (56), Expect = 7.1
Identities = 21/118 (17%), Positives = 48/118 (40%)
Frame = +2
Query: 134 SMSPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYD 313
S GT++ + N+P + +++ +G++ S+ + K + FAF + +
Sbjct: 716 SKPKGTKILIKNLPFEATKKDVQSLLGAYGQLRSVRVP-KKFDRSARGFAFAEFVTAR-E 773
Query: 314 IESCIKCFTSEEFKGSRLYVTRARESFLERLQRERNEAQRKETEKEQQHETIPNQNPI 487
+ ++ + G L + A + ++ +Q E KE E +I + I
Sbjct: 774 AANAMRALKNTHLLGRHLVLQYASNATMDDMQ-HAIEKMAKEANAEAAAPSITGKRLI 830
>SPCC306.04c |set1||histone lysine methyltransferase
Set1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 920
Score = 37.9 bits (84), Expect = 0.003
Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 6/122 (4%)
Frame = +2
Query: 131 LSMSPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFI------T 292
L P T++FVSNI ++LR F FG+V LDLK + I +
Sbjct: 88 LGPEPPTQVFVSNISPLVTSEQLRYHFKSFGEVFDLDLKLNPYTGTSLGLCCISFDKRSS 147
Query: 293 LSASNYDIESCIKCFTSEEFKGSRLYVTRARESFLERLQRERNEAQRKETEKEQQHETIP 472
+S + + + ++ F G L V R+ L E + EK+ Q ET+
Sbjct: 148 ISVAAHSAKIAVQQANGLRFSGKPLSVVLDRDG---SLCEEAFKKALNAVEKQFQEETLQ 204
Query: 473 NQ 478
Q
Sbjct: 205 KQ 206
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 37.5 bits (83), Expect = 0.004
Identities = 30/125 (24%), Positives = 57/125 (45%)
Frame = +2
Query: 359 SRLYVTRARESFLERLQRERNEAQRKETEKEQQHETIPNQNPIINLSEKLNPRKRKFESH 538
+RL+ R +++ E++ ++R +E E+E + + + + + EK R +K +
Sbjct: 549 ARLFEQRVLQAYREKVAQQRQAKLLEEIEEENKRK---QERELKKIREKEKKRDKKKQLK 605
Query: 539 VVNTYSDTEQQHETIPNQNPIINLSEKLNPRKRKFESHVVNTYSDTEKKRLEAMKQKRQE 718
+ ++ E + Q L K RK + + EKK+ E +QKR+E
Sbjct: 606 LAKEEERQRREAERLAEQAAQKALEAKRQEEARK-KREEQRLKREQEKKQQELERQKREE 664
Query: 719 FKQKQ 733
KQKQ
Sbjct: 665 -KQKQ 668
>SPAC16.02c |srp2||mRNA export factor Srp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 365
Score = 36.7 bits (81), Expect = 0.007
Identities = 28/89 (31%), Positives = 42/89 (47%)
Frame = +2
Query: 149 TRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCI 328
TRLFV IP +++ F +G++ LD K + F F+ + + D +
Sbjct: 4 TRLFVGRIPPQATREDMMDFFKGYGQI--LDCKLMNG------FGFVEVEDAR-DARDIV 54
Query: 329 KCFTSEEFKGSRLYVTRARESFLERLQRE 415
F +EF GSR+ V AR ER +RE
Sbjct: 55 NDFQGKEFMGSRIVVEPARG---ERRRRE 80
>SPBC887.05c |cwf29||RNA-binding protein Cwf29|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 217
Score = 36.7 bits (81), Expect = 0.007
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +2
Query: 140 SPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFI 289
S +++ N+ + NED++ C FS+FG+ ++L ++K FAF+
Sbjct: 28 SDSAYIYIGNLDFDLNEDDILCVFSEFGEPVDINLVRDKETGKSKGFAFL 77
>SPBC660.15 |||mRNA cleavage factor complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 35.9 bits (79), Expect = 0.012
Identities = 32/146 (21%), Positives = 61/146 (41%)
Frame = +2
Query: 152 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCIK 331
++FV +P + E+E R F++FG+V L + F F+T Y+ ES ++
Sbjct: 248 KMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVT-----YENESAVE 302
Query: 332 CFTSEEFKGSRLYVTRARESFLERLQRERNEAQRKETEKEQQHETIPNQNPIINLSEKLN 511
S+ Y+T + ++R +A +++ QH N NP ++ +N
Sbjct: 303 ATMSQP------YITIHGKPV--EVKRATPKASLRDSHDRHQHGYHGNANPY--YAQNMN 352
Query: 512 PRKRKFESHVVNTYSDTEQQHETIPN 589
+ + Y +Q E + N
Sbjct: 353 MYGGMTPAMMAQYYRQMQQYMEAMRN 378
Score = 29.9 bits (64), Expect = 0.76
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +2
Query: 152 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFIT 292
++F+ + T +D LR F +FG+V + S+ ++ F F+T
Sbjct: 164 KMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLT 210
>SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 233
Score = 35.1 bits (77), Expect = 0.020
Identities = 25/110 (22%), Positives = 50/110 (45%), Gaps = 9/110 (8%)
Frame = +2
Query: 155 LFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCIKC 334
LFV N+P++++ + L+ F + G+V S+ + + K +AF+ D+ S
Sbjct: 94 LFVGNLPKDSSVETLQLHFKRAGQVPSVRIPTDKTSGRQKGYAFVEFINPKTDVISKALK 153
Query: 335 FTSEEFKGSRLYV---------TRARESFLERLQRERNEAQRKETEKEQQ 457
F +K ++ + T AR + ++ R+ E R+ E+Q
Sbjct: 154 FHHTIYKERKINIELTAGGGGKTEARMNKIKEKNRKWKEEMRQRVASEEQ 203
>SPCC74.09 |mug24||RNA-binding protein, rrm type|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 654
Score = 34.7 bits (76), Expect = 0.027
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2
Query: 155 LFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSI 262
+F+ N+P + +E E+ AF KFGK+ + + K +I
Sbjct: 301 VFIGNLPSSYHEKEIEEAFGKFGKIEHIKILSKKNI 336
>SPBC18H10.03 |tif35||translation initiation factor
eIF3g|Schizosaccharomyces pombe|chr 2|||Manual
Length = 282
Score = 34.7 bits (76), Expect = 0.027
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +2
Query: 155 LFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCIK 331
L V+N+ ++T E+ELR F +FG + + L K FAF+ S YD + IK
Sbjct: 204 LRVTNLSDDTREEELRDLFRRFGGIQRVYLAKDKETGRAKGFAFV----SYYDRDCAIK 258
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 33.1 bits (72), Expect = 0.081
Identities = 18/85 (21%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Frame = +2
Query: 395 LERLQRERNEAQRKETEKEQQHETIPNQNPIINLSEK--LNPRKRKFESHVVNTYSDTEQ 568
LE+L++ER Q ++ KE++ + + + L ++ LN +++ + +N +
Sbjct: 127 LEKLEKERIRLQEQQRRKEERDQKLREKEEAQRLRQEQILNKERQQLK---LNNFFTKGV 183
Query: 569 QHETIPNQNPIINLSEKLNPRKRKF 643
+ PN+N + + +++LN +++F
Sbjct: 184 EKRIAPNENFVADKTDELNEFEKEF 208
Score = 28.3 bits (60), Expect = 2.3
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 344 EEFKGSRLYVTRARESFLERLQRERNEAQRKETEKEQQHETI 469
++ + R R R+ ERL+RE+ QR++ +K ++ E I
Sbjct: 78 KKLQKQRAQEERIRQKEAERLKREKERQQREQEKKLREQEKI 119
>SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protein
Tgc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 32.7 bits (71), Expect = 0.11
Identities = 24/124 (19%), Positives = 53/124 (42%), Gaps = 4/124 (3%)
Frame = +2
Query: 116 Q*NCKLSMSPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKT----FA 283
Q N + R+FV + +T + E+R F G V + + + + A
Sbjct: 33 QSNTPAQQADDFRVFVGRLSTSTKKSEIRSLFETVGTVRKVTIPFRRVRRGTRLVPSGIA 92
Query: 284 FITLSASNYDIESCIKCFTSEEFKGSRLYVTRARESFLERLQRERNEAQRKETEKEQQHE 463
F+T + + D++ I+ + + V +AR E+ ++R +++ K E+ +
Sbjct: 93 FVTFN-NQEDVDKAIETLNGKTLDDREIVVQKAR-PVQEQPIKDRKKSKNKNGEEPETST 150
Query: 464 TIPN 475
++ N
Sbjct: 151 SVEN 154
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 31.5 bits (68), Expect = 0.25
Identities = 22/109 (20%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Frame = +2
Query: 425 AQRKETEKEQQHETIPNQNPIINLSEKLNPRK---RKFESHVVNTYSDTEQQHETIPNQ- 592
++R+ +E Q + + +N I K+N ++ +K E + N E+ +++ +
Sbjct: 199 SKREAALEEFQSKLLIRENEINKRELKMNGKEDDLKKREKDLENRLLKVEEHEKSLNERA 258
Query: 593 NPIINLSEKLNPRKRKFESHVVNTYSDTEKKRLEAMKQKRQEFKQKQMI 739
+ +E N R ++FE + +++ E K Q +QK++I
Sbjct: 259 TKLSEANENFNNRFKEFEEREKSAIKQNKEQSSEGSKTANQTHEQKELI 307
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 31.5 bits (68), Expect = 0.25
Identities = 22/107 (20%), Positives = 44/107 (41%)
Frame = +2
Query: 143 PGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIES 322
P LFV + T +++L FS+FGK+ S + ++ +AFI + +E
Sbjct: 242 PENVLFVCKLNPVTQDEDLELIFSRFGKIISCQVIRDKETGDSLQYAFIEFD-NKESVEK 300
Query: 323 CIKCFTSEEFKGSRLYVTRARESFLERLQRERNEAQRKETEKEQQHE 463
+ SR++V ++ R N +++ + + E
Sbjct: 301 AYFKMQNVLIDDSRIHVDFSQSVARYRQYYNSNRDRKRSSSRSDDRE 347
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 31.5 bits (68), Expect = 0.25
Identities = 27/143 (18%), Positives = 67/143 (46%), Gaps = 5/143 (3%)
Frame = +2
Query: 377 RARESFLERLQ--RERNEAQRKETEK-EQQHETIPNQNPIINLSEKLNPRKRKFESHVVN 547
R + +E+++ ++R +R+E E Q ++ + I L +++ +++ ES+
Sbjct: 748 RDEQLLVEKIEGIKKRILLKRREVNSLESQELSVLDTEKIQTLERRISETEKELESYAGQ 807
Query: 548 TYSDTEQQHETIPNQNPIINLSEKLNPRKRKFESHVVNTYS-DTEKKRLEAMKQKRQ-EF 721
++H NQ P+I E++ + K ++ S TE RL K+ + +
Sbjct: 808 LQDAKNEEHRIRDNQRPVI---EEIRIYREKIQTETQRLSSLQTELSRLRDEKRNSEVDI 864
Query: 722 KQKQMIIKTGLSAVDKLPNKKVK 790
++ + +++ + + + KKV+
Sbjct: 865 ERHRQTVESCTNILREKEAKKVQ 887
>SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 589
Score = 31.5 bits (68), Expect = 0.25
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 149 TRLFVSNIPE-NTNEDELRCAFSKFGKVNSLDL 244
T L V NIPE + NE+ +R FSKFG + ++L
Sbjct: 242 TALEVRNIPEEHFNEENIRSFFSKFGVLEKVEL 274
>SPCC1795.06 |map2||P-factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 201
Score = 31.1 bits (67), Expect = 0.33
Identities = 17/58 (29%), Positives = 35/58 (60%)
Frame = +2
Query: 500 EKLNPRKRKFESHVVNTYSDTEQQHETIPNQNPIINLSEKLNPRKRKFESHVVNTYSD 673
++ N +KR+FE+ TY+D + ++ + N +N ++ N +KR+FE+ +Y+D
Sbjct: 50 DRPNLKKREFEAAPAKTYADFLRAYQ---SWNTFVN-PDRPNLKKREFEAAPEKSYAD 103
>SPCC1827.05c |||nucleolar RNA-binding protein NIFK
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 276
Score = 30.7 bits (66), Expect = 0.43
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 155 LFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFI 289
L+V +P E ++R FS+FG V L + +K +AFI
Sbjct: 107 LYVGRLPHGFYEKQMRMYFSQFGPVLRLRMSRNRKTGSSKHYAFI 151
>SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 29.9 bits (64), Expect = 0.76
Identities = 18/73 (24%), Positives = 34/73 (46%)
Frame = +2
Query: 152 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCIK 331
++++SN+P N ED++ FG + S L + +K F F + D E I
Sbjct: 311 KIYISNLPLNLGEDQVVELLKPFGDLLSFQLIKNIADGSSKGFCFCEFKNPS-DAEVAIS 369
Query: 332 CFTSEEFKGSRLY 370
++ G++L+
Sbjct: 370 GLDGKDTYGNKLH 382
>SPBC1289.12 |usp109||U1 snRNP-associated protein
Usp109|Schizosaccharomyces pombe|chr 2|||Manual
Length = 352
Score = 29.9 bits (64), Expect = 0.76
Identities = 16/56 (28%), Positives = 33/56 (58%)
Frame = +2
Query: 155 LFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIES 322
LF+SNI +E++++ F ++ +++ L+C + + AFI L A+ DI++
Sbjct: 75 LFISNIDPEVSENDIKYLFQRYNFISARVLRCVDG--TSTSIAFIWL-ANESDIQN 127
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 149 TRLFVSNIPENTNEDELRCAFSKFGKV 229
T ++V +PEN ELR F FG++
Sbjct: 176 TAVYVHQLPENITTQELRSYFLHFGEI 202
>SPBC119.12 |||Golgi matrix protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 401
Score = 29.9 bits (64), Expect = 0.76
Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Frame = +2
Query: 383 RESFLERLQRERNEAQRKETEKEQQHETIPNQNPIINLSEKLNPRKRKFESHVVNTY-SD 559
+ES RL + E +ETE+++Q+E + Q + N + + E + +T S
Sbjct: 181 QESLAVRLA-DCEEQLARETERQEQYE-VEIQRHLTN--------QHQLEIELESTKASH 230
Query: 560 TEQQHETIPN-QNPIINLSEKLNPRKRKFESHVVNTYSDTEKKRLEAMKQKRQEFKQKQM 736
TE E N Q + +++EK + +++E + D +KRL + E K+K +
Sbjct: 231 TENLGELTRNWQKAMDDVTEKFASKSKEYED--LQNELDATQKRLSRVSDLEHEVKEKTL 288
Query: 737 II 742
+I
Sbjct: 289 LI 290
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.9 bits (64), Expect = 0.76
Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Frame = +2
Query: 602 INLSEKLNPR-KRKFESHVVNTYSDTEKKRLEAMKQKRQEFKQKQMIIKTGLSAVDKLPN 778
+NL ++ N R K +F+S V+N Y + +LE +K+ + ++++ ++T L K +
Sbjct: 1325 LNLMKEYNSRWKLRFQS-VLNKYERVDPTQLEELKKNCEALEKEKQELETKLQETAKETD 1383
Query: 779 ---KKVKFSDEDSSILVNDFEDGKTHEKKL 859
++V +E+ L + E T +L
Sbjct: 1384 TFKQQVNSLNEEVENLKKEVEQANTKNTRL 1413
>SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 413
Score = 29.5 bits (63), Expect = 1.0
Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Frame = +2
Query: 335 FTSEEFKGSRLYVTRARESFLE---RLQRERNEAQRKETE--KEQQHETIP-NQNPIINL 496
F++ S YV RA ESF + RNE R+ T Q T P +NP +
Sbjct: 278 FSASPIDPSMSYVYRAPESFSSINANVPYGRNEYLRRVTSLVPNQPEYTGPYTRNPELRT 337
Query: 497 SEKLNPRKRKFE 532
S KL RKR+ E
Sbjct: 338 SHKLAERKRRKE 349
>SPBC29A10.02 |spo5|mrb1, mug12, SPBC365.18|meiotic RNA-binding
protein 1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 567
Score = 29.5 bits (63), Expect = 1.0
Identities = 24/92 (26%), Positives = 43/92 (46%)
Frame = +2
Query: 134 SMSPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYD 313
S S +++ +P NT+++ L ++FGKV+S K + F A +
Sbjct: 291 STSRTRNVYIRGLPPNTSDENLLLYTNRFGKVSSSKAIIDMETNLCKGYGF----ACFEE 346
Query: 314 IESCIKCFTSEEFKGSRLYVTRARESFLERLQ 409
+S + C ++ G + + A+ESF RLQ
Sbjct: 347 EKSALICISAMTLCGYQ--CSFAKESFSARLQ 376
>SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1038
Score = 29.1 bits (62), Expect = 1.3
Identities = 29/141 (20%), Positives = 54/141 (38%), Gaps = 3/141 (2%)
Frame = +2
Query: 389 SFLERLQRERNEAQRKETEKEQQHETIPNQNPIINLSEKLNPRKRKFESHVVNTYSDTEQ 568
S R R+ R + T + + NLS LN +K + H V D+E
Sbjct: 272 SNFSRATSSRSSKTRSVVYEPNHRHTSFFGDTLSNLSSSLNDKKSPNDDHAV---LDSEL 328
Query: 569 QHETIPNQNPIINLSEKLNPRKRKFESHVVNTYSDT-EKKRLEAMKQ--KRQEFKQKQMI 739
+T+P+ + ++ + + N +T EK LE + Q +Q +++
Sbjct: 329 MEQTLPDSAEAVEIANNVKEDIVSTANDDANELDNTSEKATLETSSKPVTEQAIEQSEVV 388
Query: 740 IKTGLSAVDKLPNKKVKFSDE 802
+ + N +K +DE
Sbjct: 389 QEVEEGDTNMTTNTILKPTDE 409
>SPAC6F12.03c |fsv1||SNARE Fsv1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 247
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +2
Query: 368 YVTRARESFLERLQRERNEAQRKETEKEQQHETIP 472
Y R E+FL R+QR R E+ +E EK+++ +IP
Sbjct: 62 YRVRESEAFLIRMQR-RLESAEEEFEKQRRASSIP 95
>SPCC1020.12c ||SPCC14G10.06|xap-5-like protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 288
Score = 28.7 bits (61), Expect = 1.8
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Frame = +2
Query: 551 YSDTEQQHETIPNQNP-IINLSEKLNPRKR---KFESHVVNTYSDTEKKRLEAMKQK-RQ 715
++D ++ HE + N +++L + ++ K E H ++T S KKR +A+ +K +Q
Sbjct: 4 HTDADEIHEILRNSTTGLVHLKDYQRVKQNIVEKREKHALSTTSTKIKKRKDALSKKVKQ 63
Query: 716 EFKQKQMIIKTGLSAV---DKLPNKKVK 790
K + + G D LP KKV+
Sbjct: 64 GIKVNKGKLSFGEDEELENDDLPLKKVE 91
>SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 561
Score = 27.9 bits (59), Expect = 3.1
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 143 PGTRLFVSNIPENTNEDELRCAFS 214
P ++V N+P +T+E+EL+ FS
Sbjct: 424 PCNTIYVGNLPPSTSEEELKVLFS 447
>SPAC18G6.05c |||translation elongation regulator Gcn1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2670
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 237 KLFTLPNLENAHRNSSSFVFSGIL 166
KL+ LP++E A S +FSGIL
Sbjct: 275 KLYLLPSIEKALLRSPEIIFSGIL 298
>SPBC2A9.11c ||SPBC2D10.01c|nuclear export
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 27.9 bits (59), Expect = 3.1
Identities = 34/149 (22%), Positives = 64/149 (42%), Gaps = 8/149 (5%)
Frame = +2
Query: 302 SNYDIESCIKCFTSEEFKGSRLYVTRARESFLERLQRERNEAQRKETEKEQQHETIPNQN 481
S ++E +K S +++ ++ LE L++ N +K+++ E + N
Sbjct: 28 SQPELEDEVKLLISRQYEMGNIWNVDWSSMNLESLRKLTNAQNTIIEDKKRKVEKPVSGN 87
Query: 482 PIINLSE-----KLNPRKRKFESHVVNTYSDTEQQHETIPNQNPIINLSEKLNPRKRKFE 646
LSE K R+R+FE+ + + ++ + P II S +L R +
Sbjct: 88 QFSLLSEEDEVDKKEKRRRRFENGSRSQNNAKSEELKVNPENGAIIGRSTELEKRYLRLT 147
Query: 647 SHV-VNTYSDTE--KKRLEAMKQKRQEFK 724
S +T K+ LE +K+K +E K
Sbjct: 148 SAPDPDTVRPLPVLKQTLELLKKKWKEEK 176
>SPBC646.12c |gap1|src1, sar1|GTPase activating protein
Gap1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 766
Score = 27.9 bits (59), Expect = 3.1
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -2
Query: 849 SCVFPS-SKSLTKIELSSSENFTFLFGSLSTAESPVLIIICFCLNSCLFCFMASN 688
+C P + S T SS F+ S VL+ +C CL+ L ASN
Sbjct: 686 NCTIPEFNVSNTYFTFSSPSTDNFVIAVYQRGHSKVLVEVCICLDDVLQRRYASN 740
>SPAC2F7.11 |nrd1|msa2|RNA-binding protein Nrd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 529
Score = 27.5 bits (58), Expect = 4.0
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 155 LFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSI 262
+F+ N+P EDE+R FG ++ + + + +I
Sbjct: 208 VFLGNLPNGITEDEIREDLEPFGPIDQIKIVTERNI 243
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 27.5 bits (58), Expect = 4.0
Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
Frame = +2
Query: 239 DLKCKSSIEENKTFAFITLSASNYDIESCIKCFTSEEFKGSRLYV-TRARESFLERLQRE 415
DLK K + + A + L+ SN + F E K LY + L
Sbjct: 276 DLKLKDDTFNDYSSASMELNTSNLRARASFSNFMENEKK---LYEKVNTNRTLLRNANLT 332
Query: 416 RNEAQRKETEKEQQHETIPNQNPIINLSEKL 508
NEAQ+ ++ P+ N + +L EK+
Sbjct: 333 LNEAQQSVKSLTERQGPRPSDNGVQDLQEKM 363
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 27.1 bits (57), Expect = 5.3
Identities = 11/42 (26%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 155 LFVSN-IPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKT 277
L SN IPEN + +RC F ++++++ + +++ +T
Sbjct: 477 LSTSNVIPENNRQQFIRCVFHNIMQIHAVNSRLSNALNRTQT 518
>SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 422
Score = 27.1 bits (57), Expect = 5.3
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 137 MSPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAF 286
M+P ++V NIP E+++ F + G V S L + K + F
Sbjct: 1 MNPSCVVYVGNIPYEMAEEQVIDIFKQSGPVKSFQLVIDPESGQPKGYGF 50
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 27.1 bits (57), Expect = 5.3
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +2
Query: 605 NLSEKLNPRKRKFESHVVNTYSDTEKKRLEAMKQKRQEFKQKQMIIKTGLSAVDKLPNKK 784
+L++K+N R+RK + + N LE ++ + ++FK+ II +D+ +
Sbjct: 882 DLTDKVNRRQRKNDKKIKNKIQVKLSSILEMLRSRYKKFKKP--IIDLNDIYIDESNERV 939
Query: 785 VKFSDEDS 808
VK +D+
Sbjct: 940 VKGKSKDN 947
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 27.1 bits (57), Expect = 5.3
Identities = 29/114 (25%), Positives = 58/114 (50%), Gaps = 17/114 (14%)
Frame = +2
Query: 560 TEQQHETIPNQNPIINLSEKLNPRK---RKFESHV--VNTY----SDTEK-----KRLEA 697
TE +H+ + +N N+SEK+N + +KF S N Y T K K +E
Sbjct: 875 TETKHDILAQRNR--NVSEKMNDLENAAQKFFSSPDRKNGYLYPSEHTSKIEYLEKTIED 932
Query: 698 MKQKRQEFKQKQMIIKTGLSAVDKLPNK---KVKFSDEDSSILVNDFEDGKTHE 850
+K Q+ + + ++ +S+ +K K K+K+ + + SIL+++ E ++++
Sbjct: 933 LKLALQDELKNRNLLMDDISSYNKQTTKLQEKIKWLERERSILIDELESYRSNQ 986
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 27.1 bits (57), Expect = 5.3
Identities = 31/150 (20%), Positives = 63/150 (42%), Gaps = 2/150 (1%)
Frame = +2
Query: 329 KCFTSEEFKGSRLYVTRARESFLERLQRERNEAQRKETEK--EQQHETIPNQNPIINLSE 502
K TS K + + + E L +R + ++E +K +++ E + ++ S
Sbjct: 275 KASTSPSTKDTNMRLVEGHNE--ETLALQRGKYTQEEVDKLIQERMEKVA-EDLHAQYSA 331
Query: 503 KLNPRKRKFESHVVNTYSDTEQQHETIPNQNPIINLSEKLNPRKRKFESHVVNTYSDTEK 682
K + F+++ Y T Q+ + NQ + K++ + E + + T +
Sbjct: 332 KHTQKINAFKANYARKYEATIQE---LQNQIGTAPNAPKISNSNWEEERRALKADNQTLQ 388
Query: 683 KRLEAMKQKRQEFKQKQMIIKTGLSAVDKL 772
K+LE Q+RQ+ K ++ DKL
Sbjct: 389 KQLEKAIQERQDMSDFLNNFKADMAKSDKL 418
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 26.6 bits (56), Expect = 7.1
Identities = 29/137 (21%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Frame = +2
Query: 347 EFKGSRLYVTRARESFLERLQRERNEAQRK-ETEKEQQHETIPNQNPIINL-SEKLNPRK 520
E + L + + + +++L ER A ET +++ + +++ SE+L +
Sbjct: 252 ESRSQSLKILDSNVNEMDKLIMERENALNNVETTNLKKYSSFLALKEAVSMTSEQLRVLE 311
Query: 521 RKFE--SHVVNTYSDTEQQHETI--PNQNPIINLSEKLNPRKRKFESHVVNTYSDTE--- 679
SH +N S + + + P+IN + + E + N ++
Sbjct: 312 HLLSECSHEINVLSQQSKNFNGVFESSYQPLINDLDHQISVMQNDEKRINNAKTELSLSL 371
Query: 680 KKRLEAMKQKRQEFKQK 730
+K+LEA KQK + +K K
Sbjct: 372 EKKLEAKKQKEKVYKDK 388
>SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 710
Score = 26.6 bits (56), Expect = 7.1
Identities = 30/159 (18%), Positives = 62/159 (38%), Gaps = 10/159 (6%)
Frame = +2
Query: 149 TRLFVSNIPEN--TNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIES 322
+ L+V N+ + T + +L FS FG + S L C + +K + F+ IE+
Sbjct: 382 SNLYVKNLDDTVITCKSQLEDLFSPFGSILSSMLACYPNSGISKGYGFVAFR----QIEA 437
Query: 323 CIKC---FTSEEFKGSRLYVTRA--RESFLERLQRERNEAQRKETEKEQQHETI---PNQ 478
++ R++V A + + RLQ E +Q ++ + P +
Sbjct: 438 AVRAKDTLNGMMVGKKRIFVCFAERKSDRIRRLQAFFANKPTSEQTAQQDNKALFVKPER 497
Query: 479 NPIINLSEKLNPRKRKFESHVVNTYSDTEQQHETIPNQN 595
+ + + + + K + S E ++E +N
Sbjct: 498 SSTVTIRKPIESSTNKISENPTTLSSKVENKNEPKTGEN 536
>SPAC4D7.10c |||SAGA complex subunit Spt20 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 473
Score = 26.2 bits (55), Expect = 9.3
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +2
Query: 374 TRARESFLERLQRERNEAQRKETEKEQQHETIPNQNP 484
T R F+E ++R+R Q+++ + +QQ + Q+P
Sbjct: 286 TFQRLQFIENVRRKRAILQQRQMQMQQQQKAQQQQSP 322
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 26.2 bits (55), Expect = 9.3
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 524 KFESHVVNTYSDTEQQHETIPNQNPIINLSEK 619
KF+ ++ Y T+ + + + +NP+I LSEK
Sbjct: 225 KFDRGYISPYFITDVKSQKVEFENPLILLSEK 256
>SPCC16C4.19 ||SPCC5E4.08|RNase MRP|Schizosaccharomyces pombe|chr
3|||Manual
Length = 184
Score = 26.2 bits (55), Expect = 9.3
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 668 SDTEKKRLEAMKQKRQ-EFKQKQMIIKTGLSAVDKLPNKKVKFSDEDSSILVNDF 829
+++ +LE+ K + KQ+Q + +GL+ + KK + + SS+ + DF
Sbjct: 126 AESSSTKLESRKSAHNAKVKQRQRLRASGLNGILDRKKKKDEVAKSTSSLSLQDF 180
>SPAC3C7.12 |tip1|noc1|CLIP170 family protein
Tip1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 461
Score = 26.2 bits (55), Expect = 9.3
Identities = 16/72 (22%), Positives = 33/72 (45%)
Frame = +2
Query: 599 IINLSEKLNPRKRKFESHVVNTYSDTEKKRLEAMKQKRQEFKQKQMIIKTGLSAVDKLPN 778
+ N+S N S + +KR+E + +RQ +Q+ ++ L+ VD+L +
Sbjct: 112 LTNVSSSSNLSMNTISSTALTPTEKILQKRIEDLLYERQNHQQQ---LEEVLATVDQLQS 168
Query: 779 KKVKFSDEDSSI 814
F+D+ +
Sbjct: 169 LVTNFNDQQDEV 180
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,024,351
Number of Sequences: 5004
Number of extensions: 78918
Number of successful extensions: 372
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 366
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 669373152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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