Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_H07
         (1249 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical...    30   3.9  
AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical...    30   3.9  

>AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical
           protein Y105E8A.26b protein.
          Length = 1133

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 16/69 (23%), Positives = 29/69 (42%)
 Frame = +3

Query: 48  IIPRPKALEXVNHNRVAIPLVV*RKAAGTIAVPTSSSRDKLSVTTGTKFVTLNKENRNLA 227
           II     ++ +   RVA+P++   +      +  S  +D   +  G KF      N  LA
Sbjct: 116 IIKNKDHIDMIVKRRVAVPMLEYEQRTLKFTLSKSRKKDDFGIVVGCKFYIKEIRNPKLA 175

Query: 228 DQPRGQRTG 254
           ++  G + G
Sbjct: 176 EKDPGLKEG 184


>AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical
           protein Y105E8A.26a protein.
          Length = 1172

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 16/69 (23%), Positives = 29/69 (42%)
 Frame = +3

Query: 48  IIPRPKALEXVNHNRVAIPLVV*RKAAGTIAVPTSSSRDKLSVTTGTKFVTLNKENRNLA 227
           II     ++ +   RVA+P++   +      +  S  +D   +  G KF      N  LA
Sbjct: 116 IIKNKDHIDMIVKRRVAVPMLEYEQRTLKFTLSKSRKKDDFGIVVGCKFYIKEIRNPKLA 175

Query: 228 DQPRGQRTG 254
           ++  G + G
Sbjct: 176 EKDPGLKEG 184


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,438,652
Number of Sequences: 27780
Number of extensions: 285299
Number of successful extensions: 721
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3464240056
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)