Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_H06
(1203 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150; Eukary... 353 7e-96
UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15; Eukaryo... 302 1e-80
UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3; Fungi/... 267 4e-70
UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;... 203 6e-51
UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella... 187 6e-46
UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1; Encephal... 185 2e-45
UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5; Archaea... 179 1e-43
UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13; Archae... 175 1e-42
UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3; Euryarc... 159 1e-37
UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9; Euryarc... 155 2e-36
UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15; Euryar... 150 8e-35
UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus M... 149 2e-34
UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10; Archae... 141 3e-32
UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_030012... 126 9e-28
UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo... 92 2e-17
UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7; n... 60 8e-08
UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7; n... 60 1e-07
UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n... 59 2e-07
UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7; n... 58 5e-07
UniRef50_A0ARS1 Cluster: 30S ribosomal protein S7; n=3; Poales|R... 58 6e-07
UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein ... 57 1e-06
UniRef50_Q97SQ4 Cluster: 30S ribosomal protein S7; n=211; Bacter... 56 2e-06
UniRef50_Q06J33 Cluster: Chloroplast 30S ribosomal protein S7; n... 54 6e-06
UniRef50_Q9HWD1 Cluster: 30S ribosomal protein S7; n=89; Bacteri... 52 2e-05
UniRef50_Q9G879 Cluster: 30S ribosomal protein S7; n=1; Malawimo... 50 2e-04
UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albic... 49 3e-04
UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n... 48 5e-04
UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit... 48 6e-04
UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1; ... 47 8e-04
UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1; ... 47 8e-04
UniRef50_Q85FT8 Cluster: Chloroplast 30S ribosomal protein S7; n... 47 8e-04
UniRef50_A6YGB1 Cluster: 30S ribosomal protein S7; n=1; Leptosir... 46 0.002
UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|R... 46 0.003
UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyc... 44 0.006
UniRef50_Q68XN6 Cluster: 30S ribosomal protein S7; n=10; Rickett... 44 0.006
UniRef50_Q9VKX4 Cluster: 28S ribosomal protein S7, mitochondrial... 44 0.010
UniRef50_P47150 Cluster: 37S ribosomal protein S7, mitochondrial... 42 0.024
UniRef50_UPI0000DB7910 Cluster: PREDICTED: similar to mitochondr... 42 0.032
UniRef50_Q9AIG8 Cluster: 30S ribosomal protein S7; n=2; Candidat... 42 0.042
UniRef50_P46745 Cluster: Mitochondrial ribosomal protein S7; n=1... 41 0.056
UniRef50_O93636 Cluster: 30S ribosomal protein S7P; n=1; Methano... 41 0.073
UniRef50_P59064 Cluster: 30S ribosomal protein S7; n=1; Candidat... 40 0.097
UniRef50_P14760 Cluster: Plastid 30S ribosomal protein S7; n=1; ... 40 0.097
UniRef50_A6LEJ4 Cluster: 30S ribosomal protein S7; n=7; Bacteroi... 37 0.91
UniRef50_Q17CL6 Cluster: Mitochondrial ribosomal protein S7; n=3... 36 1.6
UniRef50_A7SUI0 Cluster: Predicted protein; n=1; Nematostella ve... 36 2.1
UniRef50_Q4SMB1 Cluster: Chromosome 3 SCAF14553, whole genome sh... 36 2.8
UniRef50_Q8A473 Cluster: 30S ribosomal protein S7; n=57; Bacteri... 35 4.8
UniRef50_Q2J9E2 Cluster: Putative uncharacterized protein; n=1; ... 34 8.4
UniRef50_Q83ES8 Cluster: 30S ribosomal protein S7; n=11; Bacteri... 34 8.4
>UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150;
Eukaryota|Rep: 40S ribosomal protein S5 - Homo sapiens
(Human)
Length = 204
Score = 353 bits (867), Expect = 7e-96
Identities = 172/196 (87%), Positives = 179/196 (91%)
Frame = +3
Query: 177 PQAAXIPEIKLFGSWSCXAVQVSXXSLQASISVKAQYAKSLPHSAGRYAHKRFRKAQCPI 356
P A P+IKLFG WS VQ++ SLQ I+VK +YAK LPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 357 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 536
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 537 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSY 716
GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSY
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSY 188
Query: 717 AIKKKDELERVAKSNR 764
AIKKKDELERVAKSNR
Sbjct: 189 AIKKKDELERVAKSNR 204
>UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15;
Eukaryota|Rep: 40S ribosomal protein S5 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 197
Score = 302 bits (741), Expect = 1e-80
Identities = 147/190 (77%), Positives = 168/190 (88%), Gaps = 1/190 (0%)
Frame = +3
Query: 198 EIKLFGSWSCXAVQVSXXSLQASISV-KAQYAKSLPHSAGRYAHKRFRKAQCPIVERLTN 374
E+KLF WS VQ+S SL I V +++A +PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 8 EVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 67
Query: 375 SLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTV 554
SLMMHGRNNGKKLMAVRI+KHA EIIHLLT +NP+QV+V A++NSGPRED+TRIG AG V
Sbjct: 68 SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGVV 127
Query: 555 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKD 734
RRQAVD+SPLRRVNQAI+LL TGAREAAFRNIK+IAEC+ADELINAAKGSSNSYAIKKKD
Sbjct: 128 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKSIAECLADELINAAKGSSNSYAIKKKD 187
Query: 735 ELERVAKSNR 764
E+ERVAK+NR
Sbjct: 188 EIERVAKANR 197
>UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3;
Fungi/Metazoa group|Rep: 40S ribosomal protein S5-B -
Schizosaccharomyces pombe (Fission yeast)
Length = 203
Score = 267 bits (654), Expect = 4e-70
Identities = 136/188 (72%), Positives = 156/188 (82%)
Frame = +3
Query: 201 IKLFGSWSCXAVQVSXXSLQASISVKAQYAKSLPHSAGRYAHKRFRKAQCPIVERLTNSL 380
IKLF + V+V SL I++ + LPH+AGR+ KRFRKA+C IVERLTNSL
Sbjct: 18 IKLFNKFPFEGVEVKDISLVDYITIGN--GQPLPHTAGRFQTKRFRKARCFIVERLTNSL 75
Query: 381 MMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRR 560
MM+GRNNGKKL+A RIVKHAFEII LLT +NPLQVLV A+ GPREDSTRIG AGTVRR
Sbjct: 76 MMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQVLVDAVAACGPREDSTRIGSAGTVRR 135
Query: 561 QAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDEL 740
QAVDVSPLRRVNQA+ L+ GAREAAFRN+K+I+EC+A+E+INAAKGSSNSYAIKKKDEL
Sbjct: 136 QAVDVSPLRRVNQALALITIGAREAAFRNVKSISECLAEEIINAAKGSSNSYAIKKKDEL 195
Query: 741 ERVAKSNR 764
ERVAKSNR
Sbjct: 196 ERVAKSNR 203
>UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 280
Score = 203 bits (496), Expect = 6e-51
Identities = 99/107 (92%), Positives = 103/107 (96%)
Frame = +3
Query: 444 EIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTG 623
++ HLL +NPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTG
Sbjct: 174 QLQHLLLAQNPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTG 233
Query: 624 AREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 764
AREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 234 AREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 280
>UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella
natans|Rep: Ribosomal protein S5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 207
Score = 187 bits (455), Expect = 6e-46
Identities = 85/185 (45%), Positives = 128/185 (69%)
Frame = +3
Query: 198 EIKLFGSWSCXAVQVSXXSLQASISVKAQYAKSLPHSAGRYAHKRFRKAQCPIVERLTNS 377
++K+F W V+++ S+ I +Y + +PHS+G Y K F+K CPI+ERL S
Sbjct: 19 KMKVFNRWELEKVKINDISISNYIYFNKKYGELVPHSSGNYDKKPFKKTYCPILERLVCS 78
Query: 378 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 557
LM+ RN+GKK+ + IVKHAF ++H TG+NP+Q+LV AI N P EDS + +G +
Sbjct: 79 LMLKSRNSGKKIKTIAIVKHAFYLLHKTTGKNPIQLLVDAISNCAPHEDSLMLSNSGQKK 138
Query: 558 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDE 737
R+AVDVSP R+++QAI+ + G ++AAF+N K+I+ + DE++NAA+ S+ SYAIKKK +
Sbjct: 139 REAVDVSPYRKISQAIYFIAVGTKKAAFKNPKSISIALHDEILNAARNSNTSYAIKKKLD 198
Query: 738 LERVA 752
LE+ A
Sbjct: 199 LEKNA 203
>UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S5 -
Encephalitozoon cuniculi
Length = 208
Score = 185 bits (451), Expect = 2e-45
Identities = 98/189 (51%), Positives = 131/189 (69%)
Frame = +3
Query: 198 EIKLFGSWSCXAVQVSXXSLQASISVKAQYAKSLPHSAGRYAHKRFRKAQCPIVERLTNS 377
EI LF +S V+V+ SL+ I++ + +PH+A KA+ PI ER S
Sbjct: 22 EINLFEKYSYEEVKVNNVSLRPYINLSRRGI--VPHAATTITKGTTGKARIPIAERFVCS 79
Query: 378 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 557
LM HGRN+GKK +A+ I + A IIH +T +NPLQVLV AI+NSGPRED+ RIGRAG++R
Sbjct: 80 LMRHGRNSGKKRLAINIFEDACFIIHSMTKKNPLQVLVDAIVNSGPREDTARIGRAGSMR 139
Query: 558 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDE 737
R +VDVSPL+R++ AI L G R A+FRN T+AE +A+ELI A+ S NSYA+ KK E
Sbjct: 140 RTSVDVSPLKRISIAISNLSAGIRNASFRNRITLAEAIANELIAASTNSQNSYAVNKKKE 199
Query: 738 LERVAKSNR 764
+ER+A+SNR
Sbjct: 200 IERIAQSNR 208
>UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5;
Archaea|Rep: 30S ribosomal protein S7P - Methanopyrus
kandleri
Length = 197
Score = 179 bits (436), Expect = 1e-43
Identities = 92/196 (46%), Positives = 131/196 (66%)
Frame = +3
Query: 177 PQAAXIPEIKLFGSWSCXAVQVSXXSLQASISVKAQYAKSLPHSAGRYAHKRFRKAQCPI 356
P + E+K+FG W V+V L+ I +K Y LPH+ GR+A KRF KA+ PI
Sbjct: 5 PYLDRLYEMKVFGKWDPTEVEVRDPGLKDYICLKPMY---LPHTGGRHAKKRFAKAEVPI 61
Query: 357 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 536
VERL N +M +N GKK +A IVK AF+IIH TGENP+QVLV A+ N+ PRE++T I
Sbjct: 62 VERLINRVMRTEKNTGKKHLAYNIVKRAFDIIHERTGENPIQVLVQALENAAPREETTTI 121
Query: 537 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSY 716
G +AVD SP RR++ A+ L+ GA++ AFRN K I EC+A+E+I AA+ + +
Sbjct: 122 IYGGISYHEAVDSSPQRRLDIALRLITEGAQQRAFRNPKPIEECLAEEIIAAARYDTECH 181
Query: 717 AIKKKDELERVAKSNR 764
+I++K+E+ER+A++ R
Sbjct: 182 SIRRKEEIERIAEAAR 197
>UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13;
Archaea|Rep: 30S ribosomal protein S7P - Pyrobaculum
aerophilum
Length = 223
Score = 175 bits (427), Expect = 1e-42
Identities = 93/188 (49%), Positives = 121/188 (64%)
Frame = +3
Query: 201 IKLFGSWSCXAVQVSXXSLQASISVKAQYAKSLPHSAGRYAHKRFRKAQCPIVERLTNSL 380
I LFG WS V V L+ I +K LPH+ GRY + RF KA+ PIVERL N +
Sbjct: 39 ILLFGKWSYEDVVVRDPGLRRYICLKPVI---LPHTEGRYQNTRFGKARIPIVERLINLM 95
Query: 381 MMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRR 560
M GRN GKK A IVK AF++I+ TG+NPLQV + AIIN+ PRE+ TRI G
Sbjct: 96 MRPGRNTGKKHKAYNIVKRAFDLIYYKTGKNPLQVFIDAIINTAPREEITRIIMGGIAYS 155
Query: 561 QAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDEL 740
+VDVSP RR++ A+ + GAR +F N K I EC+ADE+I AA SYA++K++EL
Sbjct: 156 VSVDVSPQRRLDLALRWITEGARACSFNNPKPIEECLADEIIAAAANDPKSYAVRKREEL 215
Query: 741 ERVAKSNR 764
ER+A ++R
Sbjct: 216 ERIAAASR 223
>UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanococcus vannielii
Length = 194
Score = 159 bits (386), Expect = 1e-37
Identities = 87/190 (45%), Positives = 121/190 (63%), Gaps = 1/190 (0%)
Frame = +3
Query: 198 EIKLFGSWSCXAVQVSXXSLQASISVKAQYAKSLPHSAGRYAHKRFRKAQCPIVERLTNS 377
EIKLFG W +V V SL++ IS+ +PH+AGR + K F K + +VERL N
Sbjct: 8 EIKLFGKWDSTSVTVKDPSLKSHISLNPVL---IPHTAGRNSKKMFDKNKMHVVERLANK 64
Query: 378 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 557
LM N GKK + I++ A I+ T ENP+QV+V A+ NSGPRE++TRI G
Sbjct: 65 LMATQVNTGKKNEVLSIIEEALTIVENRTKENPIQVVVDALENSGPREETTRISYGGIAF 124
Query: 558 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGS-SNSYAIKKKD 734
Q+VDVSP RR++ A + GA + A ++ K+IA+C+ADEL+ A+K S+A+KKK+
Sbjct: 125 LQSVDVSPSRRLDTAFRNISLGASQGAHKSKKSIAQCLADELVAASKADMQKSFAVKKKE 184
Query: 735 ELERVAKSNR 764
E ERVA+S R
Sbjct: 185 EKERVAQSAR 194
>UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanosarcina acetivorans
Length = 189
Score = 155 bits (376), Expect = 2e-36
Identities = 78/187 (41%), Positives = 120/187 (64%)
Frame = +3
Query: 204 KLFGSWSCXAVQVSXXSLQASISVKAQYAKSLPHSAGRYAHKRFRKAQCPIVERLTNSLM 383
K+FG W V+V ++ +S+ +PHS+G++A ++F K++ IVERL N+LM
Sbjct: 6 KIFGKWDPTEVEVKDLGIKRYVSLTPVI---VPHSSGKHARQQFNKSEISIVERLANNLM 62
Query: 384 MHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQ 563
N GKK + +R V+ AF+I++ T +NP+QVLV AI N+GPRE+ R+ G +
Sbjct: 63 RTETNTGKKQVTLRAVEEAFDIVNKKTKQNPIQVLVDAIANAGPREEVVRLKYGGISVPK 122
Query: 564 AVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELE 743
AVD +P RRV+ A+ + G AAF++ +++AEC+A ELI AA + S++I +KD E
Sbjct: 123 AVDTAPQRRVDTALRYISMGTNAAAFKSKRSVAECLATELIGAANRDTKSFSINRKDAKE 182
Query: 744 RVAKSNR 764
RVAK+ R
Sbjct: 183 RVAKAAR 189
>UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Halobacterium salinarium (Halobacterium halobium)
Length = 210
Score = 150 bits (363), Expect = 8e-35
Identities = 80/187 (42%), Positives = 115/187 (61%)
Frame = +3
Query: 204 KLFGSWSCXAVQVSXXSLQASISVKAQYAKSLPHSAGRYAHKRFRKAQCPIVERLTNSLM 383
KLFG W + S + ++V + H+ GR+A K+F+K++ IVERL N LM
Sbjct: 29 KLFGKWDVAEIHYEDPSTRRYLAVTP-----VAHTMGRHAQKQFKKSEISIVERLANRLM 83
Query: 384 MHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQ 563
G N GKK A++IV+ AF+I+H T ENP+QVLV+A+ N+ PRE++ R+ G Q
Sbjct: 84 KTGANAGKKQQALKIVRDAFDIVHERTDENPIQVLVSAVENAAPREETVRLKYGGISVPQ 143
Query: 564 AVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELE 743
AVD +P RRV+QA+ L GA A+F+ AE +A++L AA + +YAI +K E E
Sbjct: 144 AVDTAPQRRVDQALKFLADGAHSASFKTPTDAAEALANQLAGAADYNVQTYAIGQKKEKE 203
Query: 744 RVAKSNR 764
RVA + R
Sbjct: 204 RVAAAAR 210
>UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S7 -
Methanoregula boonei (strain 6A8)
Length = 204
Score = 149 bits (360), Expect = 2e-34
Identities = 80/198 (40%), Positives = 121/198 (61%), Gaps = 2/198 (1%)
Frame = +3
Query: 177 PQAAXIPEIK--LFGSWSCXAVQVSXXSLQASISVKAQYAKSLPHSAGRYAHKRFRKAQC 350
P+ P+ K LF W V+V+ SL +++ Q +PHS G+++ + F KA
Sbjct: 10 PEGDAAPQSKALLFNKWDVSEVKVTDPSLVRYVNLTPQI---IPHSCGKFSRQEFNKANM 66
Query: 351 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDST 530
IVERL N LM N GKK +A+ IV+ AFE+I+ T NP++VLV AI N+GPRE++
Sbjct: 67 MIVERLINRLMQTENNTGKKQLAIGIVRDAFELINKKTKRNPIEVLVEAIGNTGPREETV 126
Query: 531 RIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSN 710
R+ G ++VD +PLRRV+ AI + +++ ++ K + +ADELI A+KG +
Sbjct: 127 RLKYGGINVPKSVDTAPLRRVDSAIGFIAEAVWKSSRKSKKPASAILADELIAASKGDAK 186
Query: 711 SYAIKKKDELERVAKSNR 764
Y++ KK+E ER+AKS R
Sbjct: 187 CYSVGKKEEKERIAKSAR 204
>UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10;
Archaea|Rep: 30S ribosomal protein S7P - Pyrococcus
horikoshii
Length = 218
Score = 141 bits (342), Expect = 3e-32
Identities = 86/205 (41%), Positives = 119/205 (58%), Gaps = 16/205 (7%)
Frame = +3
Query: 198 EIKLFGSWSCXAVQVSXXSLQASISVKAQYAKSLPHSAGRYAHKRFRKAQCPIVERLTNS 377
EIK+ G WS V+V SL+ I+++ + LPH+ GR+A K F KA IVERL N
Sbjct: 17 EIKVMGRWSTEDVEVKDPSLKPYINLEPRL---LPHTHGRHAKKHFGKANVHIVERLINK 73
Query: 378 LMMHGRN----------------NGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINS 509
+M G + N KK+ A +VK AF+II TG+NP+QVLV AI N+
Sbjct: 74 VMRSGGSHYKVAGHFMRREHRSLNSKKVRAYEVVKEAFKIIEKRTGKNPIQVLVWAIENA 133
Query: 510 GPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELIN 689
PRED+T + G AVD+SPLRR++ A+ + GA +R + AE +A+E+I
Sbjct: 134 APREDTTSVMFGGIRYHVAVDISPLRRLDVALRNIALGASAKCYRTKMSFAEALAEEIIL 193
Query: 690 AAKGSSNSYAIKKKDELERVAKSNR 764
AA SYA KK E+ER+A+S+R
Sbjct: 194 AANKDPKSYAYSKKLEIERIAESSR 218
>UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_03001272;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001272 - Ferroplasma acidarmanus fer1
Length = 182
Score = 126 bits (305), Expect = 9e-28
Identities = 64/153 (41%), Positives = 102/153 (66%)
Frame = +3
Query: 306 SAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQV 485
+ GR+++ K +ERL N+LM + GKK A +++ AF+II T +NP+Q+
Sbjct: 30 TGGRFSNYLSGKRNVNTIERLLNNLMRTEKWTGKKYSAYKVMSQAFDIIATKTKQNPVQI 89
Query: 486 LVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAE 665
LV+AI NS PRE+ TR+ G ++VDVSP RR+++A+ + GA +A+F++ I +
Sbjct: 90 LVSAIENSAPREEVTRLKYGGIAVPKSVDVSPSRRLDEALRNIARGATKASFKHKIHIQD 149
Query: 666 CVADELINAAKGSSNSYAIKKKDELERVAKSNR 764
C+A+E++ AA+ +NS+AI KK+E+ERVA S R
Sbjct: 150 CLANEILLAARNDANSFAISKKEEIERVAASAR 182
>UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo
sapiens|Rep: Ribosomal protein S5 variant - Homo sapiens
(Human)
Length = 107
Score = 92.3 bits (219), Expect = 2e-17
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +3
Query: 342 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 497
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7;
n=22; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Guillardia theta (Cryptomonas phi)
Length = 156
Score = 60.5 bits (140), Expect = 8e-08
Identities = 45/136 (33%), Positives = 79/136 (58%), Gaps = 2/136 (1%)
Frame = +3
Query: 363 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPRED--STRI 536
RL N L + GKK +A RI+ +AF+II TGE+ + V +AI P + + RI
Sbjct: 21 RLVNMLTVRILKEGKKHLAQRIIYNAFDIIKQRTGEDAILVFESAIKKVTPLVEVKARRI 80
Query: 537 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSY 716
G G+ + ++V R N A+ + ARE A K+++ +A+E+++AA + +S
Sbjct: 81 G--GSTYQVPMEVRAFRGTNLALRWITKYARERAG---KSMSMKLANEIMDAANETGSS- 134
Query: 717 AIKKKDELERVAKSNR 764
I+K++E+ R+A++N+
Sbjct: 135 -IRKREEIHRMAEANK 149
>UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7;
n=94; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Zea mays (Maize)
Length = 156
Score = 59.7 bits (138), Expect = 1e-07
Identities = 48/149 (32%), Positives = 76/149 (51%), Gaps = 1/149 (0%)
Frame = +3
Query: 321 AHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 500
A KR K+ RL N ++ +GKK +A +I+ A + I T NPL VL AI
Sbjct: 7 AEKRTAKSDPIFRNRLVNMVVNRIMKDGKKSLAYQILYRAVKKIQQKTETNPLLVLRQAI 66
Query: 501 INSGPRED-STRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVAD 677
P TR + G+ R+ +++ + AI L +++ RN +A ++
Sbjct: 67 RRVTPNIGVKTRRNKKGSTRKVPIEIGSKQGRALAIRWLLEASQKRPGRN---MAFKLSS 123
Query: 678 ELINAAKGSSNSYAIKKKDELERVAKSNR 764
EL++AAKGS AI+KK+ R+A++NR
Sbjct: 124 ELVDAAKGSGG--AIRKKEATHRMAEANR 150
>UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n=1;
Odontella sinensis|Rep: Chloroplast 30S ribosomal
protein S7 - Odontella sinensis (Marine centric diatom)
Length = 158
Score = 59.3 bits (137), Expect = 2e-07
Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 2/143 (1%)
Frame = +3
Query: 327 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIN 506
KRF +A L + L+ +GKK +A IV AFEII + T E+PL V AI N
Sbjct: 9 KRFPEADSTYNSYLVSLLITRILKSGKKNLAQNIVNAAFEIIKVKTNEDPLVVFERAIRN 68
Query: 507 SGP--REDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADE 680
+ P + RIG G+ + V+VS R N ++ + +R+ R T++ +A+E
Sbjct: 69 ASPVVEVKARRIG--GSTYQVPVEVSGFRATNLSLRWIIQYSRQRVGR---TMSIKLANE 123
Query: 681 LINAAKGSSNSYAIKKKDELERV 749
+I+ A N+ IKKK+E ++
Sbjct: 124 IIDTANDIGNT--IKKKEETHKM 144
>UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7;
n=191; Magnoliophyta|Rep: Chloroplast 30S ribosomal
protein S7 - Arabidopsis thaliana (Mouse-ear cress)
Length = 155
Score = 58.0 bits (134), Expect = 5e-07
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 2/136 (1%)
Frame = +3
Query: 363 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP--REDSTRI 536
RL N L+ +GKK +A +I+ A + I T NPL VL AI P + R+
Sbjct: 21 RLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRV 80
Query: 537 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSY 716
G G+ + +++ + AI L +R+ RN +A ++ EL++AAKGS +
Sbjct: 81 G--GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRN---MAFKLSSELVDAAKGSGD-- 133
Query: 717 AIKKKDELERVAKSNR 764
AI+KK+E R+A++NR
Sbjct: 134 AIRKKEETHRMAEANR 149
>UniRef50_A0ARS1 Cluster: 30S ribosomal protein S7; n=3; Poales|Rep:
30S ribosomal protein S7 - Elegia fenestrata
Length = 217
Score = 57.6 bits (133), Expect = 6e-07
Identities = 48/148 (32%), Positives = 75/148 (50%)
Frame = +3
Query: 321 AHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 500
A KR K+ RL N ++ +GKK +A +I A + I T NPL VL AI
Sbjct: 7 AEKRTAKSDPIYRNRLVNMVVNRIMKHGKKALAYQIFYRAAQKIQQ-TETNPLFVLREAI 65
Query: 501 INSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADE 680
P+ +AG R+ +++ P + AI L +R+ +N +A ++ E
Sbjct: 66 RRITPQIGVKARRKAGLTRQVPIEIQPRQAKVLAIRWLLEASRKRPGQN---MAIKLSAE 122
Query: 681 LINAAKGSSNSYAIKKKDELERVAKSNR 764
L++AAKG AI+KK+E R+A++NR
Sbjct: 123 LVDAAKGKGG--AIRKKEETRRMAEANR 148
>UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein S7;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein S7 - Candida albicans (Yeast)
Length = 251
Score = 56.8 bits (131), Expect = 1e-06
Identities = 41/150 (27%), Positives = 73/150 (48%)
Frame = +3
Query: 315 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 494
+YA+K+ P V+ LTN +M H GKK A ++V A I+ L ++P++VL
Sbjct: 105 KYANKKIPLRSDPTVDNLTNLIMRH----GKKAKAQKVVSRALYIVQLKLRKDPIEVLRE 160
Query: 495 AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVA 674
+ GP +T+ G +++ V + PL + + + + R + +A
Sbjct: 161 TLDKLGPLV-NTKTMSTGVAKKRVVPI-PLNEKQRNRFAIKWILEASNSRKSNDFSVRLA 218
Query: 675 DELINAAKGSSNSYAIKKKDELERVAKSNR 764
+E+INA +G S+ Y KK ++ + A R
Sbjct: 219 EEIINAYQGKSSGY--DKKAQMHKQATQQR 246
>UniRef50_Q97SQ4 Cluster: 30S ribosomal protein S7; n=211;
Bacteria|Rep: 30S ribosomal protein S7 - Streptococcus
pneumoniae
Length = 156
Score = 55.6 bits (128), Expect = 2e-06
Identities = 48/138 (34%), Positives = 73/138 (52%), Gaps = 1/138 (0%)
Frame = +3
Query: 354 IVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTR 533
+V RL N +M+ +GK+ A IV AFE I TG + L+V TA+ N P + R
Sbjct: 22 LVTRLINRVML----DGKRGTAASIVYGAFEQIKEATGNDALEVFETAMENIMPVLE-VR 76
Query: 534 IGRAGTVRRQA-VDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSN 710
R G Q V V P RR + L T AR R T+ + +A E+++AA ++
Sbjct: 77 ARRVGGSNYQVPVKVRPERRTTLGLRWLVTIAR---LRGEHTMQDRLAKEILDAA--NNT 131
Query: 711 SYAIKKKDELERVAKSNR 764
A+KK+++ R+A++NR
Sbjct: 132 GAAVKKREDTHRMAEANR 149
>UniRef50_Q06J33 Cluster: Chloroplast 30S ribosomal protein S7; n=1;
Bigelowiella natans|Rep: Chloroplast 30S ribosomal
protein S7 - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 159
Score = 54.4 bits (125), Expect = 6e-06
Identities = 38/124 (30%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
Frame = +3
Query: 402 GKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPRED--STRIGRAGTVRRQAVDV 575
G K +A +I+ + + I L+T ++P++++ A+ N P + S R+G G+ + V +
Sbjct: 34 GNKALARKIIYRSLKDIELVTKQDPIKIVEQAVSNVTPFVEIRSRRLG--GSTTQIPVFI 91
Query: 576 SPLRRVNQAI-WLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVA 752
+ R V AI WL +A N +I + ++ E++NA+ G AIKK+DE+ R+A
Sbjct: 92 NNERGVTLAIRWLFQASKNKAG--NKYSIIKRLSSEIVNASNGMGE--AIKKRDEMHRMA 147
Query: 753 KSNR 764
++N+
Sbjct: 148 EANK 151
>UniRef50_Q9HWD1 Cluster: 30S ribosomal protein S7; n=89;
Bacteria|Rep: 30S ribosomal protein S7 - Pseudomonas
aeruginosa
Length = 156
Score = 52.4 bits (120), Expect = 2e-05
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Frame = +3
Query: 315 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 494
R A KR A ++ M H +GKK +A RIV A + + +PL+
Sbjct: 5 RVAAKREVLADPKYGSQILAKFMNHVMESGKKAVAERIVYGALDKVKERGKADPLETFEK 64
Query: 495 AIINSGPRED--STRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC 668
A+ P + S R+G G + V+V P RR A+ L AR+ R K++A
Sbjct: 65 ALDAIAPLVEVKSRRVG--GATYQVPVEVRPSRRNALAMRWLVDFARK---RGEKSMALR 119
Query: 669 VADELINAAKGSSNSYAIKKKDELERVAKSNR 764
+A EL++AA+G A+KK++++ R+A++N+
Sbjct: 120 LAGELLDAAEG--KGAAVKKREDVHRMAEANK 149
>UniRef50_Q9G879 Cluster: 30S ribosomal protein S7; n=1; Malawimonas
jakobiformis|Rep: 30S ribosomal protein S7 - Malawimonas
jakobiformis
Length = 151
Score = 49.6 bits (113), Expect = 2e-04
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Frame = +3
Query: 351 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDST 530
PI+ +L N LM G K +IV + E+I T + PL ++ AI N P +
Sbjct: 16 PIISKLINVLM----KKGNKSKIEKIVYKSLELIKKNTKKTPLTIIKKAISNIKPSVELK 71
Query: 531 RIGRAGTVRRQAVDVSPLRRVNQAI-WLLCTGAREAAFRNIKTIAECVADELINAAKGSS 707
I A + ++S R+ N AI WL+ R+ K + + E++NA +
Sbjct: 72 SIKIAAKSYQIPFEISLKRQQNLAIRWLV----ESVNNRSEKELTNRLYLEILNAYQQKG 127
Query: 708 NSYAIKKKDELERVAKSNR 764
N++ KKKD++ A+SNR
Sbjct: 128 NAF--KKKDDIHHKAESNR 144
>UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albicans
IPF3361; n=2; Saccharomycetaceae|Rep: Similar to
CA4785|IPF3361 Candida albicans IPF3361 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 263
Score = 48.8 bits (111), Expect = 3e-04
Identities = 35/149 (23%), Positives = 76/149 (51%)
Frame = +3
Query: 318 YAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 497
+A+KR P ++ TN +M +GKK A +I+ A I++L T ++PL +L
Sbjct: 118 FANKRIPLPSNPTIDNFTNLIM----RDGKKSKAQKILSRALYIVYLKTRKDPLVILEET 173
Query: 498 IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVAD 677
+ P +T++ + G + + V PL++ + + + A+ + + +++
Sbjct: 174 LDKMAPLM-ATKVQKTGAAKNRTVPY-PLKKRQRNRYPITWILEGASKKKSPDYSVRLSE 231
Query: 678 ELINAAKGSSNSYAIKKKDELERVAKSNR 764
E+I+A +G S+ Y +K ++ + A ++R
Sbjct: 232 EIISAYEGKSSGY--DRKAQMHKSAMAHR 258
>UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n=3;
Chlorophyceae|Rep: Chloroplast 30S ribosomal protein S7
- Stigeoclonium helveticum (Green alga)
Length = 174
Score = 48.0 bits (109), Expect = 5e-04
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 4/141 (2%)
Frame = +3
Query: 351 PIVERLTNSLMMHG-RNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDS 527
PI +++ ++++ NGKK +A RIV F I +NP++V A+ N PR +
Sbjct: 16 PIYNKVSVHMLVNRILKNGKKSIAYRIVYSVFRKISETMNQNPVEVWEKALNNVKPRVEV 75
Query: 528 TRIGRAGTVRRQAVDVSPLRRVNQAI---WLLCTGAREAAFRNIKTIAECVADELINAAK 698
RAG++ +Q V P +AI W++ ++A K + + E+ A+
Sbjct: 76 KPRRRAGSI-QQVPRVMPSAERARAIAIRWIVSACQKKAG----KDMISKLFSEISEAS- 129
Query: 699 GSSNSYAIKKKDELERVAKSN 761
+ N A +KK+EL ++A SN
Sbjct: 130 -NKNGAAFRKKEELHKMALSN 149
>UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit
S7; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S7 - Schizosaccharomyces pombe
(Fission yeast)
Length = 259
Score = 47.6 bits (108), Expect = 6e-04
Identities = 43/139 (30%), Positives = 62/139 (44%), Gaps = 1/139 (0%)
Frame = +3
Query: 357 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 536
V+ L N +M +GKK A +IV A II TGENP+ VL AI P
Sbjct: 126 VQHLVNLIM----RDGKKAKAEKIVATALSIIQKETGENPIDVLKQAIAEISPLMKLVSA 181
Query: 537 GRAGTVRRQAVDVSPLRRVNQAI-WLLCTGAREAAFRNIKTIAECVADELINAAKGSSNS 713
R + + +R A+ W+L E + K +++ + E+I +SN
Sbjct: 182 KRFNKSVEFPMPLKERQRRRIALQWIL----GECKSSSPKRLSDRIVKEIIAIRSKTSNC 237
Query: 714 YAIKKKDELERVAKSNR*N 770
+ KKKD L R+ NR N
Sbjct: 238 F--KKKDHLHRMCLVNRGN 254
>UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 77
Score = 47.2 bits (107), Expect = 8e-04
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +3
Query: 699 GSSNSYAIKKKDELERVAKSNR 764
GSSNSYAIKKKDELERVAKSNR
Sbjct: 56 GSSNSYAIKKKDELERVAKSNR 77
>UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 299
Score = 47.2 bits (107), Expect = 8e-04
Identities = 38/140 (27%), Positives = 66/140 (47%)
Frame = +3
Query: 351 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDST 530
P +E LTN LM +GKK A R + II +T NPL ++ AI + P
Sbjct: 164 PTLEFLTNLLM----KDGKKAQAQRFITRTLSIISSVTNSNPLPLIHDAIYKAAPLVKVQ 219
Query: 531 RIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSN 710
+ G + V ++ + +A+ + +++ R ++ +A E + +G+S+
Sbjct: 220 SKKQGGKSLQVPVALTQRQSTRKALTWIIEASKKRPDRELE---RRLAAEFLAVVEGTSS 276
Query: 711 SYAIKKKDELERVAKSNR*N 770
AI KK+E ++A NR N
Sbjct: 277 --AIVKKEEQHKIATVNRAN 294
>UniRef50_Q85FT8 Cluster: Chloroplast 30S ribosomal protein S7; n=2;
Cyanidioschyzon merolae|Rep: Chloroplast 30S ribosomal
protein S7 - Cyanidioschyzon merolae (Red alga)
Length = 148
Score = 47.2 bits (107), Expect = 8e-04
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 3/137 (2%)
Frame = +3
Query: 363 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPR--EDSTRI 536
RL L++H GKK +A RIV A + I ++ + +L A+ P + R+
Sbjct: 14 RLVELLIVHVLRKGKKSLARRIVYEALKRIEERNQQSGVLMLEQAVSQVMPLVCVKARRV 73
Query: 537 GRAGTVRRQAVDVSPLRRVNQAI-WLLCTGAREAAFRNIKTIAECVADELINAAKGSSNS 713
G G + +V P +N A+ W++ + A R+ K++A +A E+ +AA G+
Sbjct: 74 G--GATYQVPQEVKPYTGINNALRWIV----KYAKDRSGKSMAIKLAAEIWDAAHGTGG- 126
Query: 714 YAIKKKDELERVAKSNR 764
AI+KK+E R+A++N+
Sbjct: 127 -AIRKKEETHRMAEANK 142
>UniRef50_A6YGB1 Cluster: 30S ribosomal protein S7; n=1; Leptosira
terrestris|Rep: 30S ribosomal protein S7 - Leptosira
terrestris (Pleurastrum terrestre)
Length = 154
Score = 46.0 bits (104), Expect = 0.002
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Frame = +3
Query: 366 LTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRA 545
L ++++ H GKK +A + I T ++PL+V+ A+ N P +
Sbjct: 22 LVHTIVNHLMKKGKKSLAYMMFYETLSEIKQKTEQDPLEVIQKAVNNVRPLVIVKSRRVS 81
Query: 546 GTVRRQAVDVSPLRRVNQAI-WLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAI 722
G+ R+ + V V AI W+L + K++ + +E ++A+K N AI
Sbjct: 82 GSTRQVPLSVDYEIGVALAIRWILAACRKRVG----KSMISKMTNEFLDASKNIGN--AI 135
Query: 723 KKKDELERVAKSNR 764
+KKDE+ ++A++NR
Sbjct: 136 RKKDEIAKMAQANR 149
>UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|Rep:
ORFD 65 - Desulfurococcus mobilis
Length = 65
Score = 45.6 bits (103), Expect = 0.003
Identities = 24/51 (47%), Positives = 31/51 (60%)
Frame = -3
Query: 448 ISNACLTIRTAISFLPLFRPCIIREFVRRSTIGHWALRKRLCAYLPAE*GK 296
+S A LT+ A FLP+F P I F+ ST+G W L KRLC+ LP G+
Sbjct: 1 MSKAFLTMWYARCFLPMFLPGRITLFISLSTMGTWVLPKRLCSCLPPVCGR 51
>UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyces
cerevisiae YJR113c RSM7; n=2; Saccharomycetales|Rep:
Similarities with sp|P47150 Saccharomyces cerevisiae
YJR113c RSM7 - Candida glabrata (Yeast) (Torulopsis
glabrata)
Length = 274
Score = 44.4 bits (100), Expect = 0.006
Identities = 37/141 (26%), Positives = 70/141 (49%), Gaps = 3/141 (2%)
Frame = +3
Query: 351 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDST 530
P V+ +TN +M H GKK A +I+ A +H T ++P+++L A+ + P
Sbjct: 139 PTVQHVTNMIMRH----GKKDRAQKIISRALYFLHCKTRKDPVELLKKALDDMAPLM-MV 193
Query: 531 RIGRAGTVRRQAVDVSPL--RRVNQAIW-LLCTGAREAAFRNIKTIAECVADELINAAKG 701
+ G + + V PL R+ N+ W + GA + R A + +EL+ +G
Sbjct: 194 KTFNTGVAKAAVIPV-PLSQRQRNRIAWKWIVEGANK---RVSNDFAVRLGEELVAVYEG 249
Query: 702 SSNSYAIKKKDELERVAKSNR 764
S+ + +K+D++ + A ++R
Sbjct: 250 KSSGF--EKRDQMHKTAIAHR 268
>UniRef50_Q68XN6 Cluster: 30S ribosomal protein S7; n=10;
Rickettsieae|Rep: 30S ribosomal protein S7 - Rickettsia
typhi
Length = 160
Score = 44.4 bits (100), Expect = 0.006
Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
Frame = +3
Query: 354 IVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTR 533
++ R N++M GKK +A +IV AF I +P Q A+ N P + T
Sbjct: 22 LLSRFINNIM----KAGKKAVAEKIVYSAFNKIEKKHSVDPYQTFNNAMHNVKPHLEVTS 77
Query: 534 IGRAGTVRRQAVDVSPLRRVNQAI-WLLCTGAREAAFRNIKTIAECVADELINAAKGSSN 710
+ G + V R A W++ A+ R+ K + + +A+EL AA ++
Sbjct: 78 VRVGGANYQVPTHVDERRGYALASRWII----NAASKRSEKMMIDKLAEELFEAA--NNR 131
Query: 711 SYAIKKKDELERVAKSNR 764
AIKKK+++ ++A++N+
Sbjct: 132 GVAIKKKEDIHKMAEANK 149
>UniRef50_Q9VKX4 Cluster: 28S ribosomal protein S7, mitochondrial
precursor; n=2; Sophophora|Rep: 28S ribosomal protein
S7, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 218
Score = 43.6 bits (98), Expect = 0.010
Identities = 33/98 (33%), Positives = 50/98 (51%)
Frame = +3
Query: 471 NPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNI 650
NP +L A+ N P T I R G + V ++ R A+ L ARE R +
Sbjct: 117 NPETLLKQAVENCRPLLQVTAIKRGGVTYQVPVPITTKRSYFLAMKWLLEAAREKE-RKV 175
Query: 651 KTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 764
++ E +A E+++AA G IK+KD+L R+ +SNR
Sbjct: 176 -SLPEKLAWEILDAAHGQGR--VIKRKDDLHRLCESNR 210
>UniRef50_P47150 Cluster: 37S ribosomal protein S7, mitochondrial
precursor; n=4; Saccharomycetaceae|Rep: 37S ribosomal
protein S7, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 247
Score = 42.3 bits (95), Expect = 0.024
Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 2/138 (1%)
Frame = +3
Query: 357 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 536
++ +TN +M HG KK A I+ A +++ T ++P+Q L ++ P T+
Sbjct: 114 LDHITNMIMRHG----KKEKAQTILSRALYLVYCQTRQDPIQALEKSLDELAPLM-MTKT 168
Query: 537 GRAGTVRRQAVDVSPL--RRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSN 710
G + + V PL R+ N+ W + A R A + +EL AKG+S+
Sbjct: 169 FNTGVAKASVIPV-PLNKRQRNRIAWNWI--VQSANQRVSSDFAVRLGEELTAIAKGTSS 225
Query: 711 SYAIKKKDELERVAKSNR 764
A +K+D++ + A ++R
Sbjct: 226 --AFEKRDQIHKTAIAHR 241
>UniRef50_UPI0000DB7910 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S7 CG5108-PA; n=1; Apis mellifera|Rep:
PREDICTED: similar to mitochondrial ribosomal protein S7
CG5108-PA - Apis mellifera
Length = 216
Score = 41.9 bits (94), Expect = 0.032
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 16/153 (10%)
Frame = +3
Query: 354 IVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLT-----------GEN----PLQVL 488
IV + TN +M GK+ +A +I+ FE I ++ EN P VL
Sbjct: 65 IVRKFTNFIM----RKGKRQLAKKILDETFENIKIIKLNEYYNTSPEYRENIILDPKTVL 120
Query: 489 VTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI-WLLCTGAREAAFRNIKTIAE 665
AI N P + +I R G + + ++ R ++ WL+ T + N + I++
Sbjct: 121 HHAIKNCTPILELRKIRRGGINYQVPIPINETRAQFLSMNWLIKTAQEKG---NTEKISD 177
Query: 666 CVADELINAAKGSSNSYAIKKKDELERVAKSNR 764
+A E+I+AAK IKKK EL ++ ++NR
Sbjct: 178 MLAKEIIDAAKNQGR--VIKKKQELHKLCEANR 208
>UniRef50_Q9AIG8 Cluster: 30S ribosomal protein S7; n=2; Candidatus
Carsonella ruddii|Rep: 30S ribosomal protein S7 -
Carsonella ruddii
Length = 156
Score = 41.5 bits (93), Expect = 0.042
Identities = 30/124 (24%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Frame = +3
Query: 396 NNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDV 575
NNGKK +A +I ++ II + +NP ++ + N P + + G+V + + +
Sbjct: 32 NNGKKNLAQKIFYYSISIISIRLNKNPFILIKKILYNVQPDFEIKKKKIGGSVYKIPIKI 91
Query: 576 SPLRRVNQAI-WLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVA 752
+ R + ++ W++ + + RN + ELI++ +NS + K+KDEL ++
Sbjct: 92 NLKRSLMFSMKWIV----KNSKLRNENGYKNKLVGELIDSY--YNNSLSTKQKDELNKII 145
Query: 753 KSNR 764
N+
Sbjct: 146 DQNK 149
>UniRef50_P46745 Cluster: Mitochondrial ribosomal protein S7; n=1;
Prototheca wickerhamii|Rep: Mitochondrial ribosomal
protein S7 - Prototheca wickerhamii
Length = 222
Score = 41.1 bits (92), Expect = 0.056
Identities = 33/107 (30%), Positives = 51/107 (47%)
Frame = +3
Query: 453 HLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGARE 632
+LL + L+VL A+ N P + ++ RAG +S + AI + A++
Sbjct: 113 NLLETISVLEVLSIALKNVTPSVELRKVRRAGNTFLIPAILSQHKANTLAIRWVIESAKK 172
Query: 633 AAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR*NI 773
+ + AEC+ADE+ A A +K+DEL A SNR NI
Sbjct: 173 KQQNSKQNFAECLADEIYQAY--LKQGKARQKRDELHSAAISNRANI 217
>UniRef50_O93636 Cluster: 30S ribosomal protein S7P; n=1;
Methanococcoides methylutens|Rep: 30S ribosomal protein
S7P - Methanococcoides methylutens
Length = 69
Score = 40.7 bits (91), Expect = 0.073
Identities = 19/48 (39%), Positives = 32/48 (66%)
Frame = +3
Query: 621 GAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 764
GA ++AF++ + +E +A ELI A+ + ++I +KD ERVAK+ R
Sbjct: 22 GANQSAFKSKRXASESLASELIAASNRDAKCFSINRKDGKERVAKAAR 69
>UniRef50_P59064 Cluster: 30S ribosomal protein S7; n=1; Candidatus
Tremblaya princeps|Rep: 30S ribosomal protein S7 -
Tremblaya princeps
Length = 156
Score = 40.3 bits (90), Expect = 0.097
Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
Frame = +3
Query: 345 QCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPRED 524
+ P V RL N +M+ +GKK +A RIV A ++ ++L+ A+ N P +
Sbjct: 19 EAPEVGRLVNLVMV----SGKKTVAARIVYTALAMLSP-DRRRSYELLMQALHNIKPSAE 73
Query: 525 STRIGRAGTVRRQAVDVSPLRRVNQAI-WLLCTGAREAAFRNIKTIAEC-VADELINAAK 698
G R ++ RR++ A+ WL + AA R + A + +E+++A
Sbjct: 74 IRTRRMGGASYRVPAEICSKRRMSLALRWL-----KSAAMRRRERYAHVRLYNEILDAL- 127
Query: 699 GSSNSYAIKKKDELERVAKSNR 764
S A++++DE+ R+A +NR
Sbjct: 128 -SRRGGAVRQRDEVHRLAHANR 148
>UniRef50_P14760 Cluster: Plastid 30S ribosomal protein S7; n=1;
Euglena longa|Rep: Plastid 30S ribosomal protein S7 -
Astasia longa (Euglenophycean alga)
Length = 178
Score = 40.3 bits (90), Expect = 0.097
Identities = 30/118 (25%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Frame = +3
Query: 396 NNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPR-EDSTRIGRAGTVRRQAVD 572
+ GKK +A I + + I + ENPL + A+ N+ P E T+ + G + + ++
Sbjct: 32 SKGKKNIARYIFYKSMQNIEKIKNENPLDIFKKAVDNATPSIELRTQKRKKGQISKISIK 91
Query: 573 VSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELER 746
RR A+ + A++ R+ K I + + E+++A ++ A++KK+E+E+
Sbjct: 92 TKLERRNKIALKFIINSAKK---RSEKNIIQKLQGEILDAY--NNTGAAVQKKEEIEK 144
>UniRef50_A6LEJ4 Cluster: 30S ribosomal protein S7; n=7;
Bacteroidetes/Chlorobi group|Rep: 30S ribosomal protein
S7 - Parabacteroides distasonis (strain ATCC 8503 / DSM
20701 / NCTC11152)
Length = 158
Score = 37.1 bits (82), Expect = 0.91
Identities = 39/141 (27%), Positives = 72/141 (51%), Gaps = 5/141 (3%)
Frame = +3
Query: 357 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIH-LLTGE--NPLQVLVTAIINSGPRED- 524
V R N LM +GKK A I A E + L E + L++ A+ N P+ +
Sbjct: 22 VTRFVNHLMY----DGKKNTAFEIFYSALETVKGKLPNEEKSALEIWKAALDNITPQVEV 77
Query: 525 -STRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKG 701
S R+G G + ++ P R+ + ++ L AR+ R KT+A+ ++ E+++A
Sbjct: 78 KSRRVG--GATFQVPTEIRPDRKESISMKNLIIFARK---RGGKTMADKLSAEIVDAFNN 132
Query: 702 SSNSYAIKKKDELERVAKSNR 764
++ K+K+++ R+A++NR
Sbjct: 133 QGGAF--KRKEDMHRMAEANR 151
>UniRef50_Q17CL6 Cluster: Mitochondrial ribosomal protein S7; n=3;
Endopterygota|Rep: Mitochondrial ribosomal protein S7 -
Aedes aegypti (Yellowfever mosquito)
Length = 226
Score = 36.3 bits (80), Expect = 1.6
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 16/153 (10%)
Frame = +3
Query: 354 IVERLTNSLMMHGRNNGKKLMAVRIVKHAFEII--------HLLTGE--------NPLQV 485
+V + TN +M G+K++A +V+ FE I HL E NP +
Sbjct: 74 LVSKFTNYVM----KKGEKVLARELVEKGFENIKRLQLERYHLAESEEEKAKIELNPRAL 129
Query: 486 LVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAE 665
L A+ NS P T I R G + V ++ R A+ L RE R + E
Sbjct: 130 LRKAVENSRPLLQLTPIKRGGVRYQVPVPITEQRSYFLAMKWLLEAIREKE-RTVH-FPE 187
Query: 666 CVADELINAAKGSSNSYAIKKKDELERVAKSNR 764
+A E+++AA ++ IK+K EL R ++NR
Sbjct: 188 KMAWEVLDAA--ANQGKVIKRKQELHRQCEANR 218
>UniRef50_A7SUI0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 144
Score = 35.9 bits (79), Expect = 2.1
Identities = 27/98 (27%), Positives = 51/98 (52%)
Frame = +3
Query: 471 NPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNI 650
+P ++ AI N P + +AG V + ++P+RR AI + AR+ +
Sbjct: 41 DPTEIFHQAIENVKPVVGCIPLRKAGKVFQVPSPLNPIRRRFFAIKWIIDAARDQSGPKN 100
Query: 651 KTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 764
+ + +A EL++A ++ AI+KK +L + A++NR
Sbjct: 101 ARMHKKLAKELLDAY--NNEGTAIRKKQDLHKRAEANR 136
>UniRef50_Q4SMB1 Cluster: Chromosome 3 SCAF14553, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 3
SCAF14553, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 292
Score = 35.5 bits (78), Expect = 2.8
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +3
Query: 639 FRNIKTIAECVADELINAAKGSSNSYAIKKKDELER 746
FRN+K I + V D+L+ KGSS + K+K+EL++
Sbjct: 126 FRNVKDIEDHVKDKLLLVKKGSSTELSDKEKNELKK 161
>UniRef50_Q8A473 Cluster: 30S ribosomal protein S7; n=57;
Bacteria|Rep: 30S ribosomal protein S7 - Bacteroides
thetaiotaomicron
Length = 158
Score = 34.7 bits (76), Expect = 4.8
Identities = 35/140 (25%), Positives = 72/140 (51%), Gaps = 5/140 (3%)
Frame = +3
Query: 360 ERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHL-LTGE--NPLQVLVTAIINSGPRED-- 524
++ + + H +GKK + I A E + L E + L++ A+ N P+ +
Sbjct: 19 DQKVSKFVNHLMYDGKKNASYEIFYAALETVKAKLPNEEKSALEIWKKALDNVTPQVEVK 78
Query: 525 STRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGS 704
S R+G G + ++ P R+ + ++ L AR+ R K++A+ +A E+++A
Sbjct: 79 SRRVG--GATFQVPTEIRPDRKESVSMKNLILFARK---RGGKSMADKLAAEIMDAFNEQ 133
Query: 705 SNSYAIKKKDELERVAKSNR 764
+Y K+K+++ R+A++NR
Sbjct: 134 GGAY--KRKEDMHRMAEANR 151
>UniRef50_Q2J9E2 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. CcI3|Rep: Putative uncharacterized protein -
Frankia sp. (strain CcI3)
Length = 374
Score = 33.9 bits (74), Expect = 8.4
Identities = 28/99 (28%), Positives = 42/99 (42%)
Frame = +3
Query: 252 SLQASISVKAQYAKSLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIV 431
+LQ + + + A P +A R R + TN L G +G +A+
Sbjct: 93 NLQQELEYRNKVAPVAPAAADRTLRMRVSLHVGSTTDSGTNRL---GDGSGAARIALHRQ 149
Query: 432 KHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAG 548
A + HLL NP LV AI++S ED+ G +G
Sbjct: 150 LDAAAVRHLLEESNPRTTLVAAILSSRAYEDAVLSGYSG 188
>UniRef50_Q83ES8 Cluster: 30S ribosomal protein S7; n=11;
Bacteria|Rep: 30S ribosomal protein S7 - Coxiella
burnetii
Length = 161
Score = 33.9 bits (74), Expect = 8.4
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +3
Query: 525 STRIGRAGTVRRQAVDVSPLRRVNQAI-WLLCTGAREAAFRNIKTIAECVADELINAAKG 701
S R+G G+ + V++ RR A WL+ A RN KT+ +A E+++A +G
Sbjct: 82 SRRVG--GSTYQVPVEIRMARRQALARRWLV----EYANKRNEKTMVLRLAHEILDAVEG 135
Query: 702 SSNSYAIKKKDELERVAKSNR 764
AIKK++++ R+AK+N+
Sbjct: 136 RGG--AIKKREDVHRMAKANQ 154
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 745,446,282
Number of Sequences: 1657284
Number of extensions: 13189052
Number of successful extensions: 31472
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 29701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31229
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 121165024814
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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