Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_H06
         (1203 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    25   1.1  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    23   4.6  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   4.6  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   6.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   6.0  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -3

Query: 343 ALRKRLCAYLPAE*GKDFAYCALTEMEACRDXXET 239
           AL ++L +++    G ++AYC L  +E+     ET
Sbjct: 70  ALAEQLGSFITLVGGPEYAYCLLPPLESLATVEET 104


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 296 RFCVLRFNGNGGLQRXXRDLHSXAT 222
           + C+LRF+ +G L R  R +H  A+
Sbjct: 109 KLCLLRFSQSGNLNRHMR-VHGAAS 132


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 296 RFCVLRFNGNGGLQRXXRDLHSXAT 222
           + C+LRF+ +G L R  R +H  A+
Sbjct: 365 KLCLLRFSQSGNLNRHMR-VHGAAS 388


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +3

Query: 264 SISVKAQYAKSL 299
           SI++K QYAKSL
Sbjct: 342 SIAIKVQYAKSL 353


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 718  PSKRRTSWSVLLN 756
            PSK R  W+VLLN
Sbjct: 1118 PSKIRICWNVLLN 1130


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,857
Number of Sequences: 336
Number of extensions: 3289
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 35041501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)