Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_H06
         (1203 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC018151-1|AAH18151.1|  204|Homo sapiens ribosomal protein S5 pr...   353   1e-96
BC015405-1|AAH15405.1|  204|Homo sapiens ribosomal protein S5 pr...   353   1e-96
AB061853-1|BAB79493.1|  204|Homo sapiens ribosomal protein S5 pr...   353   1e-96
AK223106-1|BAD96826.1|  204|Homo sapiens ribosomal protein S5 va...   349   1e-95
U14970-1|AAA85658.1|  204|Homo sapiens ribosomal protein S5 prot...   348   2e-95
AB007149-1|BAA25815.1|   55|Homo sapiens ribosomal protein S5 pr...   113   1e-24
AB209803-1|BAD93040.1|  107|Homo sapiens ribosomal protein S5 va...    92   3e-18
AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein pr...    34   0.89 
AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domai...    31   8.3  
AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domai...    31   8.3  
AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.                31   8.3  

>BC018151-1|AAH18151.1|  204|Homo sapiens ribosomal protein S5
           protein.
          Length = 204

 Score =  353 bits (867), Expect = 1e-96
 Identities = 172/196 (87%), Positives = 179/196 (91%)
 Frame = +3

Query: 177 PQAAXIPEIKLFGSWSCXAVQVSXXSLQASISVKAQYAKSLPHSAGRYAHKRFRKAQCPI 356
           P  A  P+IKLFG WS   VQ++  SLQ  I+VK +YAK LPHSAGRYA KRFRKAQCPI
Sbjct: 9   PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68

Query: 357 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 536
           VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69  VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128

Query: 537 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSY 716
           GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSY
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSY 188

Query: 717 AIKKKDELERVAKSNR 764
           AIKKKDELERVAKSNR
Sbjct: 189 AIKKKDELERVAKSNR 204


>BC015405-1|AAH15405.1|  204|Homo sapiens ribosomal protein S5
           protein.
          Length = 204

 Score =  353 bits (867), Expect = 1e-96
 Identities = 172/196 (87%), Positives = 179/196 (91%)
 Frame = +3

Query: 177 PQAAXIPEIKLFGSWSCXAVQVSXXSLQASISVKAQYAKSLPHSAGRYAHKRFRKAQCPI 356
           P  A  P+IKLFG WS   VQ++  SLQ  I+VK +YAK LPHSAGRYA KRFRKAQCPI
Sbjct: 9   PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68

Query: 357 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 536
           VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69  VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128

Query: 537 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSY 716
           GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSY
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSY 188

Query: 717 AIKKKDELERVAKSNR 764
           AIKKKDELERVAKSNR
Sbjct: 189 AIKKKDELERVAKSNR 204


>AB061853-1|BAB79493.1|  204|Homo sapiens ribosomal protein S5
           protein.
          Length = 204

 Score =  353 bits (867), Expect = 1e-96
 Identities = 172/196 (87%), Positives = 179/196 (91%)
 Frame = +3

Query: 177 PQAAXIPEIKLFGSWSCXAVQVSXXSLQASISVKAQYAKSLPHSAGRYAHKRFRKAQCPI 356
           P  A  P+IKLFG WS   VQ++  SLQ  I+VK +YAK LPHSAGRYA KRFRKAQCPI
Sbjct: 9   PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68

Query: 357 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 536
           VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69  VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128

Query: 537 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSY 716
           GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSY
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSY 188

Query: 717 AIKKKDELERVAKSNR 764
           AIKKKDELERVAKSNR
Sbjct: 189 AIKKKDELERVAKSNR 204


>AK223106-1|BAD96826.1|  204|Homo sapiens ribosomal protein S5
           variant protein.
          Length = 204

 Score =  349 bits (858), Expect = 1e-95
 Identities = 170/196 (86%), Positives = 178/196 (90%)
 Frame = +3

Query: 177 PQAAXIPEIKLFGSWSCXAVQVSXXSLQASISVKAQYAKSLPHSAGRYAHKRFRKAQCPI 356
           P  A  P+IKLFG WS   VQ++  SLQ  I+VK +YAK LPHSAGRYA KRFRKAQCPI
Sbjct: 9   PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68

Query: 357 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 536
           VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69  VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128

Query: 537 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSY 716
           GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSN Y
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNFY 188

Query: 717 AIKKKDELERVAKSNR 764
           AIKK+DELERVAKSNR
Sbjct: 189 AIKKRDELERVAKSNR 204


>U14970-1|AAA85658.1|  204|Homo sapiens ribosomal protein S5
           protein.
          Length = 204

 Score =  348 bits (856), Expect = 2e-95
 Identities = 170/196 (86%), Positives = 177/196 (90%)
 Frame = +3

Query: 177 PQAAXIPEIKLFGSWSCXAVQVSXXSLQASISVKAQYAKSLPHSAGRYAHKRFRKAQCPI 356
           P  A  P+IKLFG WS   VQ++  SLQ  I+VK +YAK LPHSAGRYA   FRKAQCPI
Sbjct: 9   PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAANAFRKAQCPI 68

Query: 357 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 536
           VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69  VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128

Query: 537 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSY 716
           GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSY
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSY 188

Query: 717 AIKKKDELERVAKSNR 764
           AIKKKDELERVAKSNR
Sbjct: 189 AIKKKDELERVAKSNR 204


>AB007149-1|BAA25815.1|   55|Homo sapiens ribosomal protein S5
           protein.
          Length = 55

 Score =  113 bits (272), Expect = 1e-24
 Identities = 54/55 (98%), Positives = 55/55 (100%)
 Frame = +3

Query: 600 AIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 764
           AIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 1   AIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 55


>AB209803-1|BAD93040.1|  107|Homo sapiens ribosomal protein S5
           variant protein.
          Length = 107

 Score = 92.3 bits (219), Expect = 3e-18
 Identities = 45/52 (86%), Positives = 46/52 (88%)
 Frame = +3

Query: 342 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 497
           AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE  L  LV A
Sbjct: 1   AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52


>AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein
            protein.
          Length = 1640

 Score = 34.3 bits (75), Expect = 0.89
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -1

Query: 405  CHCSDRASLESL*GAPRLGTGLYGNACVHTC 313
            C C + ++ E   G  R G G YG AC H C
Sbjct: 1423 CSCHNNSTCEPATGTCRCGPGFYGQACEHPC 1453


>AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domains 6
            protein.
          Length = 1229

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 405  CHCSDRASLESL*GAPRLGTGLYGNACVH 319
            C C + ++ E   G  R G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141


>AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domains 6
            protein.
          Length = 1229

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 405  CHCSDRASLESL*GAPRLGTGLYGNACVH 319
            C C + ++ E   G  R G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141


>AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.
          Length = 1246

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 405  CHCSDRASLESL*GAPRLGTGLYGNACVH 319
            C C + ++ E   G  R G G YG AC H
Sbjct: 1130 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1158


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,530,449
Number of Sequences: 237096
Number of extensions: 1995108
Number of successful extensions: 3842
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3836
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16954238840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)