Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_H05
(1230 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y09951-1|CAA71082.1| 107|Anopheles gambiae histone H2a protein. 178 3e-46
AY146760-1|AAO12075.1| 313|Anopheles gambiae odorant-binding pr... 26 2.6
AY146732-1|AAO12092.1| 327|Anopheles gambiae odorant-binding pr... 26 2.6
AF393487-1|AAL60412.1| 304|Anopheles gambiae odorant binding pr... 25 3.4
AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein. 25 4.5
AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein. 25 4.5
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 25 4.5
AY146752-1|AAO12067.1| 277|Anopheles gambiae odorant-binding pr... 24 7.9
AY146751-1|AAO12066.1| 277|Anopheles gambiae odorant-binding pr... 24 7.9
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 24 7.9
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 24 7.9
>Y09951-1|CAA71082.1| 107|Anopheles gambiae histone H2a protein.
Length = 107
Score = 178 bits (433), Expect = 3e-46
Identities = 93/103 (90%), Positives = 94/103 (91%), Gaps = 1/103 (0%)
Frame = +3
Query: 195 NRAGLQFPVGRIHRLLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKK-TR 371
NRAGLQFPVGRIHRLLR GNYAERVG GAPVYLAAVMEYLAAEVLELAGN ARDNKK R
Sbjct: 4 NRAGLQFPVGRIHRLLRKGNYAERVGPGAPVYLAAVMEYLAAEVLELAGNRARDNKKERR 63
Query: 372 IIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 500
IIPR LQLAIRNDEE NKLL VTIAQGGVLPNIQAVLLPK+T
Sbjct: 64 IIPR-LQLAIRNDEEENKLLRRVTIAQGGVLPNIQAVLLPKRT 105
>AY146760-1|AAO12075.1| 313|Anopheles gambiae odorant-binding
protein AgamOBP31 protein.
Length = 313
Score = 25.8 bits (54), Expect = 2.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 103 FVCYIVNFFKLQTCPVAEKAEKLRARSSPVRTVPV 207
F CY F L TCP A KL+A + + + V
Sbjct: 131 FQCYFREFGNLVTCPQYVPATKLQATQAALDCLTV 165
>AY146732-1|AAO12092.1| 327|Anopheles gambiae odorant-binding
protein AgamOBP44 protein.
Length = 327
Score = 25.8 bits (54), Expect = 2.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 103 FVCYIVNFFKLQTCPVAEKAEKLRA 177
F CY F L TCP ++ KL+A
Sbjct: 131 FQCYFQEFGNLVTCPQYVRSTKLQA 155
>AF393487-1|AAL60412.1| 304|Anopheles gambiae odorant binding
protein 1 protein.
Length = 304
Score = 25.4 bits (53), Expect = 3.4
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +1
Query: 103 FVCYIVNFFKLQTCPVAEKAEKLRARSSPVRTVPV 207
F CY F L TCP A KL A + + + V
Sbjct: 131 FQCYFREFGNLVTCPQYVPATKLHATQAALDCLTV 165
>AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein.
Length = 259
Score = 25.0 bits (52), Expect = 4.5
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = -1
Query: 486 VVPLECL-VKLRLERLSHRKGVCSVPRRSL 400
+ P +CL ++LR ++ HRKGVC+ +L
Sbjct: 213 ITPEDCLAMELRRHKI-HRKGVCTASEINL 241
>AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein.
Length = 260
Score = 25.0 bits (52), Expect = 4.5
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = -1
Query: 486 VVPLECL-VKLRLERLSHRKGVCSVPRRSL 400
+ P +CL ++LR ++ HRKGVC+ +L
Sbjct: 214 ITPEDCLAMELRRHKI-HRKGVCTASEINL 242
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 25.0 bits (52), Expect = 4.5
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 291 LAAVMEYLAAEVLELAGNAARDNKKTRIIPRH 386
+AA M+YLA ++ LAG+A + +IP H
Sbjct: 2 IAAAMKYLALGLVLLAGSARAE--PGEVIPNH 31
>AY146752-1|AAO12067.1| 277|Anopheles gambiae odorant-binding
protein AgamOBP35 protein.
Length = 277
Score = 24.2 bits (50), Expect = 7.9
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1
Query: 100 AFVCYIVNFFKLQTCP 147
AF CY N+ L TCP
Sbjct: 129 AFQCYYQNYGTLTTCP 144
>AY146751-1|AAO12066.1| 277|Anopheles gambiae odorant-binding
protein AgamOBP36 protein.
Length = 277
Score = 24.2 bits (50), Expect = 7.9
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1
Query: 100 AFVCYIVNFFKLQTCP 147
AF CY N+ L TCP
Sbjct: 129 AFQCYYQNYGTLTTCP 144
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 24.2 bits (50), Expect = 7.9
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +1
Query: 256 TLNALVPVHRFTWPPSWNTWPLKFWNWPVTQQETT--RRLELFLDIF 390
T+ A+ +H+F +N W WN + ++ T RR EL L F
Sbjct: 104 TVMAVTGIHKFVIGGDFNAWSAS-WNNQLGERGETQKRRGELVLSTF 149
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 24.2 bits (50), Expect = 7.9
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 237 LLRNGNYAERVGAGAPVYLAAVMEYLAAEVLELA 338
LL G + V A A + +VME++A LELA
Sbjct: 664 LLVPGTTPDNVKAAAEEAIISVMEWMARHHLELA 697
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,568
Number of Sequences: 2352
Number of extensions: 12089
Number of successful extensions: 78
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 78
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 140200221
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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