Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_H02
         (1156 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   4.4  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   4.4  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   7.6  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   7.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   7.6  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    22   7.6  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 568 AVAAGRAHTIILTDKEGVYTLGN 636
           +V   R  +I LT+ EG+  LGN
Sbjct: 323 SVTDERGRSITLTENEGIDILGN 345


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 734 MFSFPSFCMLWVTILPLYSSLTF 666
           +  F  FC LWV IL    +L F
Sbjct: 169 LHEFYGFCYLWVLILICNIALAF 191


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +2

Query: 953  GWGNSXYGQIRWRXXXPSQHALXPP 1027
            G+GN  + Q+      P  H + PP
Sbjct: 80   GYGNYYHPQLHSHHGPPIHHQIRPP 104


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
            Deformed protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +2

Query: 953  GWGNSXYGQIRWRXXXPSQHALXPP 1027
            G+GN  + Q+      P  H + PP
Sbjct: 80   GYGNYYHPQLHSHHGPPIHHQIRPP 104


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +2

Query: 953  GWGNSXYGQIRWRXXXPSQHALXPP 1027
            G+GN  + Q+      P  H + PP
Sbjct: 80   GYGNYYHPQLHSHHGPPIHHQIRPP 104


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcription
            factor TcDfd1 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +2

Query: 953  GWGNSXYGQIRWRXXXPSQHALXPP 1027
            G+GN  + Q+      P  H + PP
Sbjct: 80   GYGNYYHPQLHSHHGPPIHHQIRPP 104


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 251,691
Number of Sequences: 336
Number of extensions: 5744
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 33609622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)