Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_H01
(1225 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 36 0.058
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 32 0.72
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 32 0.72
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 0.95
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 31 1.3
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 31 1.3
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.9
Z75714-2|CAB00059.1| 474|Caenorhabditis elegans Hypothetical pr... 29 5.1
U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter... 29 5.1
U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter... 29 5.1
L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein. 29 5.1
AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical ... 29 8.8
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 35.9 bits (79), Expect = 0.058
Identities = 29/103 (28%), Positives = 31/103 (30%), Gaps = 5/103 (4%)
Frame = +1
Query: 913 PPFPLREAXPFXIAPRXXFPXRGXXXPPXXAGXPKPPXXXRXXXP----XPGXXSXXXPP 1080
PP P+ A P P PP G P+ P P PG PP
Sbjct: 367 PPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPP 426
Query: 1081 PGKTXXF-PPXAXXPGXXGXXKPGFFXXGXXXSXXGGAXPRXP 1206
G F PP PG G GF G GA P
Sbjct: 427 QGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGGNP 469
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical protein
C02C6.1a protein.
Length = 830
Score = 32.3 bits (70), Expect = 0.72
Identities = 21/75 (28%), Positives = 24/75 (32%), Gaps = 1/75 (1%)
Frame = +1
Query: 913 PPFPLREAXPFXIAPRXXFPXRGXXXPPXXAGXPKPPXXXRXXXPXPGXXSXXXPPPGKT 1092
PP P+ + P P R PP P PP P PG P G
Sbjct: 749 PPLPMSDYRPHPSGPSPV--PRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGG 806
Query: 1093 XXFPP-XAXXPGXXG 1134
+PP PG G
Sbjct: 807 GMYPPLIPTRPGPGG 821
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 32.3 bits (70), Expect = 0.72
Identities = 21/75 (28%), Positives = 24/75 (32%), Gaps = 1/75 (1%)
Frame = +1
Query: 913 PPFPLREAXPFXIAPRXXFPXRGXXXPPXXAGXPKPPXXXRXXXPXPGXXSXXXPPPGKT 1092
PP P+ + P P R PP P PP P PG P G
Sbjct: 749 PPLPMSDYRPHPSGPSPV--PRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGG 806
Query: 1093 XXFPP-XAXXPGXXG 1134
+PP PG G
Sbjct: 807 GMYPPLIPTRPGPGG 821
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 31.9 bits (69), Expect = 0.95
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +1
Query: 991 PPXXAGXPKPPXXXRXXXPXPGXXSXXXPPPGKTXXFPPXAXXPGXXG 1134
PP G P PP P P PPP PP P G
Sbjct: 77 PPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLG 124
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical protein
C02C6.1b protein.
Length = 838
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/65 (27%), Positives = 21/65 (32%)
Frame = +1
Query: 913 PPFPLREAXPFXIAPRXXFPXRGXXXPPXXAGXPKPPXXXRXXXPXPGXXSXXXPPPGKT 1092
PP P+ + P P R PP P PP P PG P G
Sbjct: 749 PPLPMSDYRPHPSGPSPV--PRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGG 806
Query: 1093 XXFPP 1107
+PP
Sbjct: 807 GMYPP 811
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical protein
F12F6.6 protein.
Length = 1126
Score = 31.5 bits (68), Expect = 1.3
Identities = 23/71 (32%), Positives = 24/71 (33%), Gaps = 3/71 (4%)
Frame = +1
Query: 994 PXXAGXPK--PPXXXRXXXPX-PGXXSXXXPPPGKTXXFPPXAXXPGXXGXXKPGFFXXG 1164
P G P+ PP P PG PG FPP A PG G PG F G
Sbjct: 260 PQGPGMPRAFPPGASAPVAPGMPGAFPPGQGGPGMPGSFPPGA--PGPGGPGMPGSFAPG 317
Query: 1165 XXXSXXGGAXP 1197
G P
Sbjct: 318 APGPGGPGGYP 328
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/65 (27%), Positives = 21/65 (32%)
Frame = +1
Query: 913 PPFPLREAXPFXIAPRXXFPXRGXXXPPXXAGXPKPPXXXRXXXPXPGXXSXXXPPPGKT 1092
PP P+ + P P R PP P PP P PG P G
Sbjct: 749 PPLPMSDYRPHPSGPSPV--PRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGG 806
Query: 1093 XXFPP 1107
+PP
Sbjct: 807 GMYPP 811
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 1.7
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +1
Query: 994 PXXAGXPKPPXXXRXXXPXPGXXSXXXPPPGKTXXFPPXAXXPGXXGXXKP 1146
P G P PP P G PPPG PP G G P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.7
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +1
Query: 994 PXXAGXPKPPXXXRXXXPXPGXXSXXXPPPGKTXXFPPXAXXPGXXGXXKP 1146
P G P PP P G PPPG PP G G P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 1.7
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +1
Query: 994 PXXAGXPKPPXXXRXXXPXPGXXSXXXPPPGKTXXFPPXAXXPGXXGXXKP 1146
P G P PP P G PPPG PP G G P
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 2.9
Identities = 25/101 (24%), Positives = 30/101 (29%)
Frame = +1
Query: 913 PPFPLREAXPFXIAPRXXFPXRGXXXPPXXAGXPKPPXXXRXXXPXPGXXSXXXPPPGKT 1092
PP P + + P + P PP G P PP P P S P G
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG-SPPPPPAGGSPPPPRAGSP 297
Query: 1093 XXFPPXAXXPGXXGXXKPGFFXXGXXXSXXGGAXPRXPXKK 1215
PP P P G G+ P P +K
Sbjct: 298 PPPPPPRGSPPTGSLPPPQ--AGGSPPPAGTGSPPPPPRQK 336
Score = 30.3 bits (65), Expect = 2.9
Identities = 23/82 (28%), Positives = 26/82 (31%)
Frame = +1
Query: 901 PETCPPFPLREAXPFXIAPRXXFPXRGXXXPPXXAGXPKPPXXXRXXXPXPGXXSXXXPP 1080
P+ PP + P A P R PP G P PP P P S PP
Sbjct: 243 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG-GSPPPPRAGSPPPPP 301
Query: 1081 PGKTXXFPPXAXXPGXXGXXKP 1146
P + PP P P
Sbjct: 302 PPR--GSPPTGSLPPPQAGGSP 321
Score = 29.1 bits (62), Expect = 6.7
Identities = 26/97 (26%), Positives = 27/97 (27%), Gaps = 3/97 (3%)
Frame = +1
Query: 862 APXXPXLXRPCRLPETCPPFPLREAXPFXIAPRXXFPXRGXXXPPXXAGXPKPPXXXRXX 1041
+P P P P P P R P P P G PP G P PP
Sbjct: 271 SPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP-PPAGTGSP 329
Query: 1042 XPXP---GXXSXXXPPPGKTXXFPPXAXXPGXXGXXK 1143
P P PP G P P G K
Sbjct: 330 PPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGK 366
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 2.9
Identities = 25/101 (24%), Positives = 30/101 (29%)
Frame = +1
Query: 913 PPFPLREAXPFXIAPRXXFPXRGXXXPPXXAGXPKPPXXXRXXXPXPGXXSXXXPPPGKT 1092
PP P + + P + P PP G P PP P P S P G
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG-SPPPPPAGGSPPPPRAGSP 318
Query: 1093 XXFPPXAXXPGXXGXXKPGFFXXGXXXSXXGGAXPRXPXKK 1215
PP P P G G+ P P +K
Sbjct: 319 PPPPPPRGSPPTGSLPPPQ--AGGSPPPAGTGSPPPPPRQK 357
Score = 30.3 bits (65), Expect = 2.9
Identities = 23/82 (28%), Positives = 26/82 (31%)
Frame = +1
Query: 901 PETCPPFPLREAXPFXIAPRXXFPXRGXXXPPXXAGXPKPPXXXRXXXPXPGXXSXXXPP 1080
P+ PP + P A P R PP G P PP P P S PP
Sbjct: 264 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG-GSPPPPRAGSPPPPP 322
Query: 1081 PGKTXXFPPXAXXPGXXGXXKP 1146
P + PP P P
Sbjct: 323 PPR--GSPPTGSLPPPQAGGSP 342
Score = 29.1 bits (62), Expect = 6.7
Identities = 26/97 (26%), Positives = 27/97 (27%), Gaps = 3/97 (3%)
Frame = +1
Query: 862 APXXPXLXRPCRLPETCPPFPLREAXPFXIAPRXXFPXRGXXXPPXXAGXPKPPXXXRXX 1041
+P P P P P P R P P P G PP G P PP
Sbjct: 292 SPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP-PPAGTGSP 350
Query: 1042 XPXP---GXXSXXXPPPGKTXXFPPXAXXPGXXGXXK 1143
P P PP G P P G K
Sbjct: 351 PPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGK 387
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 2.9
Identities = 25/101 (24%), Positives = 30/101 (29%)
Frame = +1
Query: 913 PPFPLREAXPFXIAPRXXFPXRGXXXPPXXAGXPKPPXXXRXXXPXPGXXSXXXPPPGKT 1092
PP P + + P + P PP G P PP P P S P G
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG-SPPPPPAGGSPPPPRAGSP 303
Query: 1093 XXFPPXAXXPGXXGXXKPGFFXXGXXXSXXGGAXPRXPXKK 1215
PP P P G G+ P P +K
Sbjct: 304 PPPPPPRGSPPTGSLPPPQ--AGGSPPPAGTGSPPPPPRQK 342
Score = 30.3 bits (65), Expect = 2.9
Identities = 23/82 (28%), Positives = 26/82 (31%)
Frame = +1
Query: 901 PETCPPFPLREAXPFXIAPRXXFPXRGXXXPPXXAGXPKPPXXXRXXXPXPGXXSXXXPP 1080
P+ PP + P A P R PP G P PP P P S PP
Sbjct: 249 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG-GSPPPPRAGSPPPPP 307
Query: 1081 PGKTXXFPPXAXXPGXXGXXKP 1146
P + PP P P
Sbjct: 308 PPR--GSPPTGSLPPPQAGGSP 327
Score = 29.1 bits (62), Expect = 6.7
Identities = 26/97 (26%), Positives = 27/97 (27%), Gaps = 3/97 (3%)
Frame = +1
Query: 862 APXXPXLXRPCRLPETCPPFPLREAXPFXIAPRXXFPXRGXXXPPXXAGXPKPPXXXRXX 1041
+P P P P P P R P P P G PP G P PP
Sbjct: 277 SPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP-PPAGTGSP 335
Query: 1042 XPXP---GXXSXXXPPPGKTXXFPPXAXXPGXXGXXK 1143
P P PP G P P G K
Sbjct: 336 PPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGK 372
>Z75714-2|CAB00059.1| 474|Caenorhabditis elegans Hypothetical
protein ZC434.3 protein.
Length = 474
Score = 29.5 bits (63), Expect = 5.1
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 958 GGLXGRAXLPEGGKADRFPVNGRVGTGXXTXXLSGGNAWXXYSP 827
GG+ + E G RFP++G V G + GNA+ SP
Sbjct: 381 GGIDFPLPIGENGAGVRFPLSGAVEQGTSPYAYAHGNAFNPVSP 424
>U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter than
wild-typeprotein 10, isoform a protein.
Length = 335
Score = 29.5 bits (63), Expect = 5.1
Identities = 22/84 (26%), Positives = 27/84 (32%), Gaps = 2/84 (2%)
Frame = +1
Query: 904 ETCPPFPLREAXPFXIAPRXXFPXRGXXXPPXXAGXPKPPXXXRXXXP--XPGXXSXXXP 1077
+TCP +RE P P+ +G P G P PP PG P
Sbjct: 139 QTCPLNQVREPPPCRPCPKGPPGIKGWPGFPGDVGPPGPPGLKGIDGEDGAPGETGPTGP 198
Query: 1078 PPGKTXXFPPXAXXPGXXGXXKPG 1149
P + P P G K G
Sbjct: 199 PGYRGGPGAPGDKGPTPEGDLKEG 222
>U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter than
wild-typeprotein 10, isoform b protein.
Length = 372
Score = 29.5 bits (63), Expect = 5.1
Identities = 22/84 (26%), Positives = 27/84 (32%), Gaps = 2/84 (2%)
Frame = +1
Query: 904 ETCPPFPLREAXPFXIAPRXXFPXRGXXXPPXXAGXPKPPXXXRXXXP--XPGXXSXXXP 1077
+TCP +RE P P+ +G P G P PP PG P
Sbjct: 176 QTCPLNQVREPPPCRPCPKGPPGIKGWPGFPGDVGPPGPPGLKGIDGEDGAPGETGPTGP 235
Query: 1078 PPGKTXXFPPXAXXPGXXGXXKPG 1149
P + P P G K G
Sbjct: 236 PGYRGGPGAPGDKGPTPEGDLKEG 259
>L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein.
Length = 356
Score = 29.5 bits (63), Expect = 5.1
Identities = 22/84 (26%), Positives = 27/84 (32%), Gaps = 2/84 (2%)
Frame = +1
Query: 904 ETCPPFPLREAXPFXIAPRXXFPXRGXXXPPXXAGXPKPPXXXRXXXP--XPGXXSXXXP 1077
+TCP +RE P P+ +G P G P PP PG P
Sbjct: 160 QTCPLNQVREPPPCRPCPKGPPGIKGWPGFPGDVGPPGPPGLKGIDGEDGAPGETGPTGP 219
Query: 1078 PPGKTXXFPPXAXXPGXXGXXKPG 1149
P + P P G K G
Sbjct: 220 PGYRGGPGAPGDKGPTPEGDLKEG 243
>AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical
protein Y47D3B.6 protein.
Length = 269
Score = 28.7 bits (61), Expect = 8.8
Identities = 19/76 (25%), Positives = 21/76 (27%), Gaps = 3/76 (3%)
Frame = +1
Query: 889 PCRLPETCPP---FPLREAXPFXIAPRXXFPXRGXXXPPXXAGXPKPPXXXRXXXPXPGX 1059
PC P C P A P +AP P P A P P P P
Sbjct: 32 PCAAPAVCQASVCIPTAAAPPMMMAPPAPLPAYAPAPLPAYAPAPLPAPVFAAPAPAPVF 91
Query: 1060 XSXXXPPPGKTXXFPP 1107
+ PP P
Sbjct: 92 AAPFAAPPAPVIAAQP 107
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,029,905
Number of Sequences: 27780
Number of extensions: 222477
Number of successful extensions: 474
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 388
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3380764392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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