Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_G21
         (1233 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.85 
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   3.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   6.0  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.5 bits (58), Expect = 0.85
 Identities = 11/28 (39%), Positives = 11/28 (39%)
 Frame = -1

Query: 411 DXXPXPXXPPPXPPPXRXKXTAPPXLXP 328
           D    P  PPP PPP       PP   P
Sbjct: 522 DLTGGPLGPPPPPPPGGAVLNIPPQFLP 549


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 3.4
 Identities = 14/41 (34%), Positives = 14/41 (34%)
 Frame = +1

Query: 496 GRGXXAXXGGGXXVXXPXGGXPXGXXXGXGGXSXGXXPXGR 618
           GRG     GGG       GG   G   G GG        GR
Sbjct: 68  GRGGRGGRGGGRGRGRGRGGRDGGGGFGGGGYGDRNGDGGR 108


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.6 bits (51), Expect = 6.0
 Identities = 19/74 (25%), Positives = 21/74 (28%)
 Frame = -1

Query: 588 PPXTXPXXAGXPPXXXGDXXXPPGXXXXPTPPXXPXXXXXXXXXRXGXXXKTXPXXXXAD 409
           PP T       PP   G    PPG      P   P         + G   +  P      
Sbjct: 200 PPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPP---GAVPGMQPGMQPR-PPSAQGMQ 255

Query: 408 XXPXPXXPPPXPPP 367
             P    PPP  PP
Sbjct: 256 RPPMMGQPPPIRPP 269


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.316    0.154    0.558 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 321,263
Number of Sequences: 2352
Number of extensions: 3831
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 140608968
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)