Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_G21
(1233 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 39 0.008
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 39 0.008
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.059
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.059
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.059
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.078
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.078
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.078
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 35 0.10
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 35 0.10
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 32 0.96
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 32 0.96
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.3
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 31 1.3
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 30 2.9
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 30 2.9
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 30 2.9
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 30 2.9
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 2.9
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 5.1
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 29 5.1
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 5.1
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 5.1
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 29 6.8
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 29 8.9
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 38.7 bits (86), Expect = 0.008
Identities = 30/108 (27%), Positives = 33/108 (30%), Gaps = 2/108 (1%)
Frame = -2
Query: 608 GXXPXXXPPXPXX--LPXGXPPXGXXTXXPPPXXAXXPRPXXXPXXXXRXPXXXAGXPXK 435
G P PP P +P PP T PPP + P P R P G P
Sbjct: 258 GQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTP-GPPGMPGM 316
Query: 434 XXPXXXXRTXXXXPXXPPPXPPPXAKNXQXPXXWXPXXXPXXGXAXEG 291
P R PP PPP + P P P A G
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPP---GMRYPGGMPPPPPPRYPSAGPG 361
Score = 31.5 bits (68), Expect = 1.3
Identities = 21/80 (26%), Positives = 21/80 (26%)
Frame = -2
Query: 608 GXXPXXXPPXPXXLPXGXPPXGXXTXXPPPXXAXXPRPXXXPXXXXRXPXXXAGXPXKXX 429
G P PP P P G P PPP P P G P
Sbjct: 294 GMWPPPPPPPPGRTP-GPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 352
Query: 428 PXXXXRTXXXXPXXPPPXPP 369
P P PP PP
Sbjct: 353 PRYPSAGPGMYPPPPPSRPP 372
Score = 29.9 bits (64), Expect = 3.9
Identities = 22/86 (25%), Positives = 22/86 (25%)
Frame = -2
Query: 626 PGXRPXGXXPXXXPPXPXXLPXGXPPXGXXTXXPPPXXAXXPRPXXXPXXXXRXPXXXAG 447
PG P PP P G P G PPP P R P G
Sbjct: 304 PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYP--GGMPPPPPPRYPSAGPG 361
Query: 446 XPXKXXPXXXXRTXXXXPXXPPPXPP 369
P PPP PP
Sbjct: 362 MYPPPPPSRPPAPPSGHGMIPPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 38.7 bits (86), Expect = 0.008
Identities = 30/108 (27%), Positives = 33/108 (30%), Gaps = 2/108 (1%)
Frame = -2
Query: 608 GXXPXXXPPXPXX--LPXGXPPXGXXTXXPPPXXAXXPRPXXXPXXXXRXPXXXAGXPXK 435
G P PP P +P PP T PPP + P P R P G P
Sbjct: 268 GQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTP-GPPGMPGM 326
Query: 434 XXPXXXXRTXXXXPXXPPPXPPPXAKNXQXPXXWXPXXXPXXGXAXEG 291
P R PP PPP + P P P A G
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPP---GMRYPGGMPPPPPPRYPSAGPG 371
Score = 31.5 bits (68), Expect = 1.3
Identities = 21/80 (26%), Positives = 21/80 (26%)
Frame = -2
Query: 608 GXXPXXXPPXPXXLPXGXPPXGXXTXXPPPXXAXXPRPXXXPXXXXRXPXXXAGXPXKXX 429
G P PP P P G P PPP P P G P
Sbjct: 304 GMWPPPPPPPPGRTP-GPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 362
Query: 428 PXXXXRTXXXXPXXPPPXPP 369
P P PP PP
Sbjct: 363 PRYPSAGPGMYPPPPPSRPP 382
Score = 29.9 bits (64), Expect = 3.9
Identities = 22/86 (25%), Positives = 22/86 (25%)
Frame = -2
Query: 626 PGXRPXGXXPXXXPPXPXXLPXGXPPXGXXTXXPPPXXAXXPRPXXXPXXXXRXPXXXAG 447
PG P PP P G P G PPP P R P G
Sbjct: 314 PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYP--GGMPPPPPPRYPSAGPG 371
Query: 446 XPXKXXPXXXXRTXXXXPXXPPPXPP 369
P PPP PP
Sbjct: 372 MYPPPPPSRPPAPPSGHGMIPPPPPP 397
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.9 bits (79), Expect = 0.059
Identities = 25/86 (29%), Positives = 25/86 (29%)
Frame = -2
Query: 623 GXRPXGXXPXXXPPXPXXLPXGXPPXGXXTXXPPPXXAXXPRPXXXPXXXXRXPXXXAGX 444
G R P P P P G PP PPP A P P P G
Sbjct: 224 GFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSP----PPPRTGSPPPPPTGS 279
Query: 443 PXKXXPXXXXRTXXXXPXXPPPXPPP 366
P P PPP PPP
Sbjct: 280 P--PPPPAGGSPPPPRAGSPPPPPPP 303
Score = 35.5 bits (78), Expect = 0.078
Identities = 32/122 (26%), Positives = 33/122 (27%), Gaps = 10/122 (8%)
Frame = -2
Query: 626 PGXRPXGXXPXXXPPXPXXLPXGXPPXGXXTXXPPPXXAXXPRPXXXPXXXXRXPXXXAG 447
P P G P P P P T PPP P P P P AG
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP---PPAGGSPPPPRAG 295
Query: 446 XPXKXXPXXXXRTXXXXP-----XXPPP-----XPPPXAKNXQXPXXWXPXXXPXXGXAX 297
P P P PPP PPP + Q P P P G
Sbjct: 296 SPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPP 355
Query: 296 EG 291
G
Sbjct: 356 TG 357
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.9 bits (79), Expect = 0.059
Identities = 25/86 (29%), Positives = 25/86 (29%)
Frame = -2
Query: 623 GXRPXGXXPXXXPPXPXXLPXGXPPXGXXTXXPPPXXAXXPRPXXXPXXXXRXPXXXAGX 444
G R P P P P G PP PPP A P P P G
Sbjct: 245 GFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSP----PPPRTGSPPPPPTGS 300
Query: 443 PXKXXPXXXXRTXXXXPXXPPPXPPP 366
P P PPP PPP
Sbjct: 301 P--PPPPAGGSPPPPRAGSPPPPPPP 324
Score = 35.5 bits (78), Expect = 0.078
Identities = 32/122 (26%), Positives = 33/122 (27%), Gaps = 10/122 (8%)
Frame = -2
Query: 626 PGXRPXGXXPXXXPPXPXXLPXGXPPXGXXTXXPPPXXAXXPRPXXXPXXXXRXPXXXAG 447
P P G P P P P T PPP P P P P AG
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP---PPAGGSPPPPRAG 316
Query: 446 XPXKXXPXXXXRTXXXXP-----XXPPP-----XPPPXAKNXQXPXXWXPXXXPXXGXAX 297
P P P PPP PPP + Q P P P G
Sbjct: 317 SPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPP 376
Query: 296 EG 291
G
Sbjct: 377 TG 378
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.9 bits (79), Expect = 0.059
Identities = 25/86 (29%), Positives = 25/86 (29%)
Frame = -2
Query: 623 GXRPXGXXPXXXPPXPXXLPXGXPPXGXXTXXPPPXXAXXPRPXXXPXXXXRXPXXXAGX 444
G R P P P P G PP PPP A P P P G
Sbjct: 230 GFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSP----PPPRTGSPPPPPTGS 285
Query: 443 PXKXXPXXXXRTXXXXPXXPPPXPPP 366
P P PPP PPP
Sbjct: 286 P--PPPPAGGSPPPPRAGSPPPPPPP 309
Score = 35.5 bits (78), Expect = 0.078
Identities = 32/122 (26%), Positives = 33/122 (27%), Gaps = 10/122 (8%)
Frame = -2
Query: 626 PGXRPXGXXPXXXPPXPXXLPXGXPPXGXXTXXPPPXXAXXPRPXXXPXXXXRXPXXXAG 447
P P G P P P P T PPP P P P P AG
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP---PPAGGSPPPPRAG 301
Query: 446 XPXKXXPXXXXRTXXXXP-----XXPPP-----XPPPXAKNXQXPXXWXPXXXPXXGXAX 297
P P P PPP PPP + Q P P P G
Sbjct: 302 SPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPP 361
Query: 296 EG 291
G
Sbjct: 362 TG 363
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.5 bits (78), Expect = 0.078
Identities = 24/98 (24%), Positives = 24/98 (24%)
Frame = -2
Query: 626 PGXRPXGXXPXXXPPXPXXLPXGXPPXGXXTXXPPPXXAXXPRPXXXPXXXXRXPXXXAG 447
P P G P P P P G PP PPP P P P G
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPG----GFKGG 783
Query: 446 XPXKXXPXXXXRTXXXXPXXPPPXPPPXAKNXQXPXXW 333
P P P PP P W
Sbjct: 784 PPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGPMRKFPW 821
Score = 34.7 bits (76), Expect = 0.14
Identities = 24/83 (28%), Positives = 24/83 (28%)
Frame = -2
Query: 614 PXGXXPXXXPPXPXXLPXGXPPXGXXTXXPPPXXAXXPRPXXXPXXXXRXPXXXAGXPXK 435
P G P P P P G PP PPP P P P G P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP----PPPPPGGCPPP 771
Query: 434 XXPXXXXRTXXXXPXXPPPXPPP 366
P PPP PPP
Sbjct: 772 PPPP----PPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.5 bits (78), Expect = 0.078
Identities = 24/98 (24%), Positives = 24/98 (24%)
Frame = -2
Query: 626 PGXRPXGXXPXXXPPXPXXLPXGXPPXGXXTXXPPPXXAXXPRPXXXPXXXXRXPXXXAG 447
P P G P P P P G PP PPP P P P G
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPG----GFKGG 783
Query: 446 XPXKXXPXXXXRTXXXXPXXPPPXPPPXAKNXQXPXXW 333
P P P PP P W
Sbjct: 784 PPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGPMRKFPW 821
Score = 34.7 bits (76), Expect = 0.14
Identities = 24/83 (28%), Positives = 24/83 (28%)
Frame = -2
Query: 614 PXGXXPXXXPPXPXXLPXGXPPXGXXTXXPPPXXAXXPRPXXXPXXXXRXPXXXAGXPXK 435
P G P P P P G PP PPP P P P G P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP----PPPPPGGCPPP 771
Query: 434 XXPXXXXRTXXXXPXXPPPXPPP 366
P PPP PPP
Sbjct: 772 PPPP----PPGGFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.5 bits (78), Expect = 0.078
Identities = 24/98 (24%), Positives = 24/98 (24%)
Frame = -2
Query: 626 PGXRPXGXXPXXXPPXPXXLPXGXPPXGXXTXXPPPXXAXXPRPXXXPXXXXRXPXXXAG 447
P P G P P P P G PP PPP P P P G
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPG----GFKGG 366
Query: 446 XPXKXXPXXXXRTXXXXPXXPPPXPPPXAKNXQXPXXW 333
P P P PP P W
Sbjct: 367 PPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGPMRKFPW 404
Score = 34.7 bits (76), Expect = 0.14
Identities = 24/83 (28%), Positives = 24/83 (28%)
Frame = -2
Query: 614 PXGXXPXXXPPXPXXLPXGXPPXGXXTXXPPPXXAXXPRPXXXPXXXXRXPXXXAGXPXK 435
P G P P P P G PP PPP P P P G P
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP----PPPPPGGCPPP 354
Query: 434 XXPXXXXRTXXXXPXXPPPXPPP 366
P PPP PPP
Sbjct: 355 PPPP----PPGGFKGGPPPPPPP 373
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 35.1 bits (77), Expect = 0.10
Identities = 28/100 (28%), Positives = 30/100 (30%)
Frame = +1
Query: 328 GXQXXGXCXFXAXGGGXGGGXXGXWXXVRXXXXGXXFXGXPAXXXGXRSXXXGXXXGRGX 507
G G C GGG GGG G G G + G + G G
Sbjct: 156 GGGGGGGCG-GGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGG 214
Query: 508 XAXXGGGXXVXXPXGGXPXGXXXGXGGXSXGXXPXGRXPG 627
GGG P GG G GG S G G G
Sbjct: 215 GGSSGGGGYASAPSGG--GGYATSGGGGSGGYATGGSSGG 252
Score = 33.1 bits (72), Expect = 0.42
Identities = 26/100 (26%), Positives = 29/100 (29%)
Frame = +1
Query: 316 GXXXGXQXXGXCXFXAXGGGXGGGXXGXWXXVRXXXXGXXFXGXPAXXXGXRSXXXGXXX 495
G G G C + GG GGG G G G + G +
Sbjct: 136 GGGCGGGSSGGCGGGSSGGCGGGGGGGC------GGGGGGGCGGGSSGGGGYAVAPSGGG 189
Query: 496 GRGXXAXXGGGXXVXXPXGGXPXGXXXGXGGXSXGXXPXG 615
G G GGG P GG G GG P G
Sbjct: 190 GCGGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYASAPSG 229
Score = 31.9 bits (69), Expect = 0.96
Identities = 24/87 (27%), Positives = 24/87 (27%)
Frame = +1
Query: 367 GGGXGGGXXGXWXXVRXXXXGXXFXGXPAXXXGXRSXXXGXXXGRGXXAXXGGGXXVXXP 546
GGG GGG G G G G G G G G G
Sbjct: 87 GGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGG 146
Query: 547 XGGXPXGXXXGXGGXSXGXXPXGRXPG 627
GG G G GG G G G
Sbjct: 147 CGGGSSGGCGGGGGGGCGGGGGGGCGG 173
Score = 31.5 bits (68), Expect = 1.3
Identities = 26/87 (29%), Positives = 26/87 (29%)
Frame = +1
Query: 367 GGGXGGGXXGXWXXVRXXXXGXXFXGXPAXXXGXRSXXXGXXXGRGXXAXXGGGXXVXXP 546
GGG GGG G G G G G G G GGG
Sbjct: 80 GGGCGGGGGG----CGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 135
Query: 547 XGGXPXGXXXGXGGXSXGXXPXGRXPG 627
GG G G GG S G G G
Sbjct: 136 GGGCGGGSSGGCGGGSSGGCGGGGGGG 162
Score = 30.3 bits (65), Expect = 2.9
Identities = 24/88 (27%), Positives = 24/88 (27%), Gaps = 5/88 (5%)
Frame = +1
Query: 367 GGGXGGGXXGXWXXVRXXXXGXXFXGXPAXXXGXRSXXXGXXXGRG-----XXAXXGGGX 531
GGG GGG G G G G G G G GGG
Sbjct: 121 GGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGG 180
Query: 532 XVXXPXGGXPXGXXXGXGGXSXGXXPXG 615
P GG G GG P G
Sbjct: 181 YAVAPSGGGGCGGGGSSGGGGYAVAPSG 208
Score = 29.9 bits (64), Expect = 3.9
Identities = 27/91 (29%), Positives = 28/91 (30%)
Frame = +1
Query: 355 FXAXGGGXGGGXXGXWXXVRXXXXGXXFXGXPAXXXGXRSXXXGXXXGRGXXAXXGGGXX 534
F + GGG GGG G G PA G G G G GG
Sbjct: 22 FPSAGGGGGGGGCGGGCG-GGCGGGGGCAPPPAPCGG------GCGGGGGGCGGGGGCAP 74
Query: 535 VXXPXGGXPXGXXXGXGGXSXGXXPXGRXPG 627
P GG G G GG G G G
Sbjct: 75 PPAPCGGGCGGGGGGCGGGGGGCGGGGGCGG 105
Score = 29.5 bits (63), Expect = 5.1
Identities = 25/92 (27%), Positives = 25/92 (27%), Gaps = 1/92 (1%)
Frame = +1
Query: 343 GXCXFXAXGGGXG-GGXXGXWXXVRXXXXGXXFXGXPAXXXGXRSXXXGXXXGRGXXAXX 519
G C G G G GG G G G G S G G G
Sbjct: 108 GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGG 167
Query: 520 GGGXXVXXPXGGXPXGXXXGXGGXSXGXXPXG 615
GGG GG G GG G G
Sbjct: 168 GGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGG 199
Score = 29.1 bits (62), Expect = 6.8
Identities = 29/112 (25%), Positives = 30/112 (26%)
Frame = +1
Query: 265 GXCRXXXXPPSXAXPXXGXXXGXQXXGXCXFXAXGGGXGGGXXGXWXXVRXXXXGXXFXG 444
G C P G G G C GG GGG G G G
Sbjct: 70 GGCAPPPAPCGGGCGGGGGGCGG-GGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 128
Query: 445 XPAXXXGXRSXXXGXXXGRGXXAXXGGGXXVXXPXGGXPXGXXXGXGGXSXG 600
G G G G + G G GG G G GG S G
Sbjct: 129 GGCGGGGGGGCGGGSSGGCGGGSSGGCG---GGGGGGCGGGGGGGCGGGSSG 177
Score = 28.7 bits (61), Expect = 8.9
Identities = 24/91 (26%), Positives = 25/91 (27%)
Frame = +1
Query: 343 GXCXFXAXGGGXGGGXXGXWXXVRXXXXGXXFXGXPAXXXGXRSXXXGXXXGRGXXAXXG 522
G C G G GGG G G G G G G G + G
Sbjct: 88 GGCGGGGGGCGGGGGCGGGGGGCGGGGGGCG-GGGGGCGGGGGGCGGGGGGGCGGGSSGG 146
Query: 523 GGXXVXXPXGGXPXGXXXGXGGXSXGXXPXG 615
G GG G G GG G G
Sbjct: 147 CGGGSSGGCGGGGGGGCGGGGGGGCGGGSSG 177
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 35.1 bits (77), Expect = 0.10
Identities = 28/100 (28%), Positives = 30/100 (30%)
Frame = +1
Query: 328 GXQXXGXCXFXAXGGGXGGGXXGXWXXVRXXXXGXXFXGXPAXXXGXRSXXXGXXXGRGX 507
G G C GGG GGG G G G + G + G G
Sbjct: 156 GGGGGGGCG-GGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGG 214
Query: 508 XAXXGGGXXVXXPXGGXPXGXXXGXGGXSXGXXPXGRXPG 627
GGG P GG G GG S G G G
Sbjct: 215 GGSSGGGGYASAPSGG--GGYATSGGGGSGGYATGGSSGG 252
Score = 33.1 bits (72), Expect = 0.42
Identities = 26/100 (26%), Positives = 29/100 (29%)
Frame = +1
Query: 316 GXXXGXQXXGXCXFXAXGGGXGGGXXGXWXXVRXXXXGXXFXGXPAXXXGXRSXXXGXXX 495
G G G C + GG GGG G G G + G +
Sbjct: 136 GGGCGGGSSGGCGGGSSGGCGGGGGGGC------GGGGGGGCGGGSSGGGGYAVAPSGGG 189
Query: 496 GRGXXAXXGGGXXVXXPXGGXPXGXXXGXGGXSXGXXPXG 615
G G GGG P GG G GG P G
Sbjct: 190 GCGGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYASAPSG 229
Score = 31.9 bits (69), Expect = 0.96
Identities = 24/87 (27%), Positives = 24/87 (27%)
Frame = +1
Query: 367 GGGXGGGXXGXWXXVRXXXXGXXFXGXPAXXXGXRSXXXGXXXGRGXXAXXGGGXXVXXP 546
GGG GGG G G G G G G G G G
Sbjct: 87 GGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGG 146
Query: 547 XGGXPXGXXXGXGGXSXGXXPXGRXPG 627
GG G G GG G G G
Sbjct: 147 CGGGSSGGCGGGGGGGCGGGGGGGCGG 173
Score = 31.5 bits (68), Expect = 1.3
Identities = 26/87 (29%), Positives = 26/87 (29%)
Frame = +1
Query: 367 GGGXGGGXXGXWXXVRXXXXGXXFXGXPAXXXGXRSXXXGXXXGRGXXAXXGGGXXVXXP 546
GGG GGG G G G G G G G GGG
Sbjct: 80 GGGCGGGGGG----CGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 135
Query: 547 XGGXPXGXXXGXGGXSXGXXPXGRXPG 627
GG G G GG S G G G
Sbjct: 136 GGGCGGGSSGGCGGGSSGGCGGGGGGG 162
Score = 30.3 bits (65), Expect = 2.9
Identities = 24/88 (27%), Positives = 24/88 (27%), Gaps = 5/88 (5%)
Frame = +1
Query: 367 GGGXGGGXXGXWXXVRXXXXGXXFXGXPAXXXGXRSXXXGXXXGRG-----XXAXXGGGX 531
GGG GGG G G G G G G G GGG
Sbjct: 121 GGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGG 180
Query: 532 XVXXPXGGXPXGXXXGXGGXSXGXXPXG 615
P GG G GG P G
Sbjct: 181 YAVAPSGGGGCGGGGSSGGGGYAVAPSG 208
Score = 29.9 bits (64), Expect = 3.9
Identities = 27/91 (29%), Positives = 28/91 (30%)
Frame = +1
Query: 355 FXAXGGGXGGGXXGXWXXVRXXXXGXXFXGXPAXXXGXRSXXXGXXXGRGXXAXXGGGXX 534
F + GGG GGG G G PA G G G G GG
Sbjct: 22 FPSAGGGGGGGGCGGGCG-GGCGGGGGCAPPPAPCGG------GCGGGGGGCGGGGGCAP 74
Query: 535 VXXPXGGXPXGXXXGXGGXSXGXXPXGRXPG 627
P GG G G GG G G G
Sbjct: 75 PPAPCGGGCGGGGGGCGGGGGGCGGGGGCGG 105
Score = 29.5 bits (63), Expect = 5.1
Identities = 25/92 (27%), Positives = 25/92 (27%), Gaps = 1/92 (1%)
Frame = +1
Query: 343 GXCXFXAXGGGXG-GGXXGXWXXVRXXXXGXXFXGXPAXXXGXRSXXXGXXXGRGXXAXX 519
G C G G G GG G G G G S G G G
Sbjct: 108 GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGG 167
Query: 520 GGGXXVXXPXGGXPXGXXXGXGGXSXGXXPXG 615
GGG GG G GG G G
Sbjct: 168 GGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGG 199
Score = 29.1 bits (62), Expect = 6.8
Identities = 29/112 (25%), Positives = 30/112 (26%)
Frame = +1
Query: 265 GXCRXXXXPPSXAXPXXGXXXGXQXXGXCXFXAXGGGXGGGXXGXWXXVRXXXXGXXFXG 444
G C P G G G C GG GGG G G G
Sbjct: 70 GGCAPPPAPCGGGCGGGGGGCGG-GGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 128
Query: 445 XPAXXXGXRSXXXGXXXGRGXXAXXGGGXXVXXPXGGXPXGXXXGXGGXSXG 600
G G G G + G G GG G G GG S G
Sbjct: 129 GGCGGGGGGGCGGGSSGGCGGGSSGGCG---GGGGGGCGGGGGGGCGGGSSG 177
Score = 28.7 bits (61), Expect = 8.9
Identities = 24/91 (26%), Positives = 25/91 (27%)
Frame = +1
Query: 343 GXCXFXAXGGGXGGGXXGXWXXVRXXXXGXXFXGXPAXXXGXRSXXXGXXXGRGXXAXXG 522
G C G G GGG G G G G G G G + G
Sbjct: 88 GGCGGGGGGCGGGGGCGGGGGGCGGGGGGCG-GGGGGCGGGGGGCGGGGGGGCGGGSSGG 146
Query: 523 GGXXVXXPXGGXPXGXXXGXGGXSXGXXPXG 615
G GG G G GG G G
Sbjct: 147 CGGGSSGGCGGGGGGGCGGGGGGGCGGGSSG 177
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 31.9 bits (69), Expect = 0.96
Identities = 27/87 (31%), Positives = 27/87 (31%)
Frame = +1
Query: 367 GGGXGGGXXGXWXXVRXXXXGXXFXGXPAXXXGXRSXXXGXXXGRGXXAXXGGGXXVXXP 546
G G GGG G W R G G G G GRG GGG
Sbjct: 54 GWGRGGGGSG-WGGGRGGGWGNNGGGGNWGGNGGGGNGGG---GRGGGGGGGGGRGGGGG 109
Query: 547 XGGXPXGXXXGXGGXSXGXXPXGRXPG 627
G G G GG G GR G
Sbjct: 110 GRGGGGGGGGGRGGGGGGRGGGGRGRG 136
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 31.9 bits (69), Expect = 0.96
Identities = 21/74 (28%), Positives = 22/74 (29%)
Frame = +1
Query: 367 GGGXGGGXXGXWXXVRXXXXGXXFXGXPAXXXGXRSXXXGXXXGRGXXAXXGGGXXVXXP 546
GGG GGG G G + G G G G GGG
Sbjct: 106 GGGMGGGGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGY 165
Query: 547 XGGXPXGXXXGXGG 588
GG G G GG
Sbjct: 166 GGGGMGGGGYGGGG 179
Score = 31.9 bits (69), Expect = 0.96
Identities = 25/86 (29%), Positives = 25/86 (29%)
Frame = +1
Query: 367 GGGXGGGXXGXWXXVRXXXXGXXFXGXPAXXXGXRSXXXGXXXGRGXXAXXGGGXXVXXP 546
GGG GGG G G G G G G G GGG P
Sbjct: 167 GGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGG-GMGGGGYGGGGDGGYGP 225
Query: 547 XGGXPXGXXXGXGGXSXGXXPXGRXP 624
GG G G G G G P
Sbjct: 226 SGGYGGGYGPGGGYGMGGGGGGGGCP 251
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.5 bits (68), Expect = 1.3
Identities = 29/118 (24%), Positives = 30/118 (25%), Gaps = 1/118 (0%)
Frame = +1
Query: 265 GXCRXXXXPPSXAXPXXGXXXGXQXXGXCXFXAXGGGXGGGXXGXWXXVRXXXXG-XXFX 441
G C PP+ G G G G G GGG G G
Sbjct: 50 GGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGC 109
Query: 442 GXPAXXXGXRSXXXGXXXGRGXXAXXGGGXXVXXPXGGXPXGXXXGXGGXSXGXXPXG 615
P G G G GGG GG G G GG G G
Sbjct: 110 APPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGG 167
Score = 30.3 bits (65), Expect = 2.9
Identities = 24/83 (28%), Positives = 26/83 (31%), Gaps = 1/83 (1%)
Frame = +1
Query: 355 FXAXGG-GXGGGXXGXWXXVRXXXXGXXFXGXPAXXXGXRSXXXGXXXGRGXXAXXGGGX 531
F + GG G GGG G G G A + G G G GGG
Sbjct: 20 FPSGGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGC 79
Query: 532 XVXXPXGGXPXGXXXGXGGXSXG 600
GG G G GG G
Sbjct: 80 GGGGGCGGGGGGCGGGGGGCGGG 102
Score = 29.5 bits (63), Expect = 5.1
Identities = 23/76 (30%), Positives = 23/76 (30%)
Frame = +1
Query: 361 AXGGGXGGGXXGXWXXVRXXXXGXXFXGXPAXXXGXRSXXXGXXXGRGXXAXXGGGXXVX 540
A GGG GGG G G G G G G G GGG
Sbjct: 117 ACGGGCGGGGGGCGGGCGGGGGG----GCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGG 172
Query: 541 XPXGGXPXGXXXGXGG 588
GG G G GG
Sbjct: 173 GGGGGCGGGGGGGCGG 188
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 31.5 bits (68), Expect = 1.3
Identities = 24/83 (28%), Positives = 25/83 (30%), Gaps = 9/83 (10%)
Frame = +1
Query: 367 GGGXGGGXXGXWXXVRXXXXGXX---------FXGXPAXXXGXRSXXXGXXXGRGXXAXX 519
GGG GGG G W G + G G R GRG
Sbjct: 93 GGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPGSN 152
Query: 520 GGGXXVXXPXGGXPXGXXXGXGG 588
GGG GG G G GG
Sbjct: 153 GGGDWGGNGGGGRGGGGGRGGGG 175
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 30.3 bits (65), Expect = 2.9
Identities = 21/76 (27%), Positives = 23/76 (30%)
Frame = +1
Query: 361 AXGGGXGGGXXGXWXXVRXXXXGXXFXGXPAXXXGXRSXXXGXXXGRGXXAXXGGGXXVX 540
A GGG GGG + V G G + G G G GGG
Sbjct: 288 AMGGGGGGGATSAYFGVGSGAMGGGGAGAQSAYFGVGGGPVGGGGGGAKSGGGGGGIPGQ 347
Query: 541 XPXGGXPXGXXXGXGG 588
G G G GG
Sbjct: 348 SVYMGAGGGGGGGGGG 363
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 30.3 bits (65), Expect = 2.9
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 4/66 (6%)
Frame = -2
Query: 626 PGXRPXGXXPXXXPPXPXXLPXGXPPXGXXTXXPP----PXXAXXPRPXXXPXXXXRXPX 459
P RP G P P P G PP PP P + PRP P R P
Sbjct: 62 PAPRPSGQPPGPQGPSDLPGPSGAPPGPPHPSGPPHRPHPHPSRRPRPTRLP-RPSRSPH 120
Query: 458 XXAGXP 441
A P
Sbjct: 121 SDAPEP 126
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 30.3 bits (65), Expect = 2.9
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 402 PXPXXPPPXPPPXRXKXTAPP 340
P P PPP PPP +APP
Sbjct: 3 PPPPPPPPPPPPPPPAASAPP 23
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 30.3 bits (65), Expect = 2.9
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 402 PXPXXPPPXPPPXRXKXTAPP 340
P P PPP PPP +APP
Sbjct: 3 PPPPPPPPPPPPPPPAASAPP 23
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 30.3 bits (65), Expect = 2.9
Identities = 21/94 (22%), Positives = 27/94 (28%), Gaps = 1/94 (1%)
Frame = -1
Query: 618 PAXGXXXXRXPPXTXPXXAGX-PPXXXGDXXXPPGXXXXPTPPXXPXXXXXXXXXRXGXX 442
P + P T P + PP PP P+P P
Sbjct: 444 PPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPP----P 499
Query: 441 XKTXPXXXXADXXPXPXXPPPXPPPXRXKXTAPP 340
P + P P PPP PP + + PP
Sbjct: 500 PPLPPIATPSSVPPPPPPPPPPPPALEQEISGPP 533
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 5.1
Identities = 19/75 (25%), Positives = 20/75 (26%), Gaps = 1/75 (1%)
Frame = -2
Query: 587 PPXPXXLPXGXPPXGXXTXXPPPXXAXXPRPXXXPXXXX-RXPXXXAGXPXKXXPXXXXR 411
PP P PPP P P P P P + P R
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPR 181
Query: 410 TXXXXPXXPPPXPPP 366
P P P PPP
Sbjct: 182 NPPRTPPSPIPPPPP 196
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 29.5 bits (63), Expect = 5.1
Identities = 22/83 (26%), Positives = 24/83 (28%)
Frame = +1
Query: 361 AXGGGXGGGXXGXWXXVRXXXXGXXFXGXPAXXXGXRSXXXGXXXGRGXXAXXGGGXXVX 540
A GGG GGG + V G G + G G G GGG
Sbjct: 182 AMGGGGGGGATSAYFGVGSGAMGGGGAGAQSAYFGVGGGPVGGGGGGAKSGGGGGGIPGQ 241
Query: 541 XPXGGXPXGXXXGXGGXSXGXXP 609
G G G G S P
Sbjct: 242 SVYMGAGGGGGGGGGATSAYFAP 264
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 29.5 bits (63), Expect = 5.1
Identities = 22/82 (26%), Positives = 22/82 (26%), Gaps = 4/82 (4%)
Frame = -2
Query: 599 PXXXPPXPXX-LPXGXPPXGXXTXXPPPXXAXXPRPXXXPXXXXRXPXXXAGXP---XKX 432
P PP P LP PP PPP P P G P K
Sbjct: 69 PTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPVGIPLYSEKQ 128
Query: 431 XPXXXXRTXXXXPXXPPPXPPP 366
T P PP PP
Sbjct: 129 HQQQLRPTTAVSPPKPPSFAPP 150
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 29.5 bits (63), Expect = 5.1
Identities = 22/82 (26%), Positives = 22/82 (26%), Gaps = 4/82 (4%)
Frame = -2
Query: 599 PXXXPPXPXX-LPXGXPPXGXXTXXPPPXXAXXPRPXXXPXXXXRXPXXXAGXP---XKX 432
P PP P LP PP PPP P P G P K
Sbjct: 291 PTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPVGIPLYSEKQ 350
Query: 431 XPXXXXRTXXXXPXXPPPXPPP 366
T P PP PP
Sbjct: 351 HQQQLRPTTAVSPPKPPSFAPP 372
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 29.1 bits (62), Expect = 6.8
Identities = 28/98 (28%), Positives = 30/98 (30%), Gaps = 3/98 (3%)
Frame = +1
Query: 316 GXXXGXQXXGXCXFXAXG-GGXGGGXXGXWXXV-RXXXXGXXFXGXPAXXXGXRSXXX-G 486
G G + F G GG GGG G + R G G G R G
Sbjct: 17 GGRGGDRGGSRGGFGGGGRGGYGGGDRGSFGGGDRGGFRGGRGGGDRGGFRGGRGGGDRG 76
Query: 487 XXXGRGXXAXXGGGXXVXXPXGGXPXGXXXGXGGXSXG 600
GRG GG G P G G GG G
Sbjct: 77 GFGGRGSPRGGFGGRGSPRGGRGSPRGGRGGAGGMRGG 114
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 28.7 bits (61), Expect = 8.9
Identities = 26/83 (31%), Positives = 26/83 (31%)
Frame = +1
Query: 367 GGGXGGGXXGXWXXVRXXXXGXXFXGXPAXXXGXRSXXXGXXXGRGXXAXXGGGXXVXXP 546
GGG GGG G G F G G G G G GG
Sbjct: 21 GGGFGGGNNGGSGFGGGKNGGTGFGG---GNTGGSGFGGGNTGGSGFGGGKAGGSGF--- 74
Query: 547 XGGXPXGXXXGXGGXSXGXXPXG 615
GG G G GG S G P G
Sbjct: 75 GGGNTCG--SGFGGGSTGGSPYG 95
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.154 0.558
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,964,730
Number of Sequences: 27780
Number of extensions: 149992
Number of successful extensions: 1384
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3412067766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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