Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_G14
         (1272 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    31   0.072
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            29   0.22 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   0.88 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   8.2  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 31.1 bits (67), Expect = 0.072
 Identities = 21/77 (27%), Positives = 22/77 (28%)
 Frame = +2

Query: 707 GXXXGGXGXXPPXGGGGGXXXPXENPXXXRGGXGXXKGXNPXXAXXXGXPXGAXXRGGXS 886
           G   GG G   P GGGG    P   P    GG G  +          G   G    GG  
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGP--GPGGGGGGGGRDRDHRDRDREREGGGNGGGGGGGMQ 258

Query: 887 XKXXGGGXXGXXPXRGG 937
               G         R G
Sbjct: 259 LDGRGNAIPSMVVDRRG 275



 Score = 26.6 bits (56), Expect = 1.5
 Identities = 13/35 (37%), Positives = 13/35 (37%)
 Frame = +3

Query: 504 KXGXPXGGGXXKXGGXPLXXGGGXXPXXXGXGXGG 608
           K   P  GG    GG P   GG       G G GG
Sbjct: 196 KEDEPGAGGGGSGGGAPGGGGGSSGGPGPGGGGGG 230


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 29.5 bits (63), Expect = 0.22
 Identities = 17/49 (34%), Positives = 18/49 (36%)
 Frame = -3

Query: 1018 PXXPPXXXXXGGPPGXXXGGXXXGXXXXXPXGXXPXXPPPPXFXGXSPP 872
            P  PP     G PP    GG   G     P G  P  P    F G +PP
Sbjct: 582  PPAPPPPPPMGPPPSPLAGGPLGG-----PAGSRPPLPNLLGFGGAAPP 625



 Score = 26.6 bits (56), Expect = 1.5
 Identities = 12/32 (37%), Positives = 12/32 (37%)
 Frame = +3

Query: 948  PXXXPPXXXPGGPPXXXKXGGXXGXXXXXPPP 1043
            P   PP   P GPP     GG  G      PP
Sbjct: 581  PPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPP 612



 Score = 25.8 bits (54), Expect = 2.7
 Identities = 23/83 (27%), Positives = 24/83 (28%)
 Frame = -2

Query: 758 PPPPXXGXXNRSPPXXXRAXRXXVXVXGRAPXXPXPFPXXXXGSXXXGXLPPXPLXXXXG 579
           PPPP  G     PP         +    RAP     FP            P  P      
Sbjct: 532 PPPPPGGAVLNIPPQFLPPPLNLL----RAPF----FPLNPAQLRFPAGFPNLPNAQPPP 583

Query: 578 XXPPPXXKGXPPXFXXPPPXGPP 510
             PPP   G PP      P G P
Sbjct: 584 APPPPPPMGPPPSPLAGGPLGGP 606



 Score = 25.0 bits (52), Expect = 4.7
 Identities = 24/96 (25%), Positives = 26/96 (27%), Gaps = 1/96 (1%)
 Frame = -1

Query: 924 GXXPXXPPPXXFXXXPPRXXAPXGXPXXXAFXGXXPFXXPXPPRXXX-GFSXGXXXPPPP 748
           G  P  PP       PP+   P        F    P     P        +     PPPP
Sbjct: 529 GPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPP 588

Query: 747 PXGGXKPXPPXXXPXXXXXXXXXRKSPPXPXPLSXG 640
           P  G  P P    P            PP P  L  G
Sbjct: 589 PPMGPPPSPLAGGPLGGPAG----SRPPLPNLLGFG 620


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 27.5 bits (58), Expect = 0.88
 Identities = 19/61 (31%), Positives = 22/61 (36%)
 Frame = -2

Query: 932 PXGVXPPXXPPPXXXGXLPPGPXPXGXXPSXXXFXGXXPXXAPXXPGXFXGFPXVXGXPP 753
           P G+  P  PP    G  P GP P G  P+        P   P       G   + G PP
Sbjct: 291 PSGMVGPPRPPMPMQGGAPGGP-PQGMRPNFY----NRPMGDPQTSRPPSGNDNMGGGPP 345

Query: 752 P 750
           P
Sbjct: 346 P 346



 Score = 26.2 bits (55), Expect = 2.0
 Identities = 18/66 (27%), Positives = 18/66 (27%), Gaps = 3/66 (4%)
 Frame = -1

Query: 906 PPPXXFXXXPPRXXAPXGXPXXXAFXGXXPFXXPXPPRXXXGFSXGXXXPPPPP---XGG 736
           PP       PP    P          G  P   P       G   G   PP PP    GG
Sbjct: 248 PPSAQGMQRPPMMGQPPPIRPPNPMGGPRPQISPQNSNLSGGMPSGMVGPPRPPMPMQGG 307

Query: 735 XKPXPP 718
               PP
Sbjct: 308 APGGPP 313


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.2 bits (50), Expect = 8.2
 Identities = 13/37 (35%), Positives = 14/37 (37%)
 Frame = +2

Query: 650 RGXGXGGLFRXXXXXXXXXGXXXGGXGXXPPXGGGGG 760
           R  G GG+           G   GG G     GGGGG
Sbjct: 530 RTVGAGGMAGGGSDGPEYEGAGRGGVGSGIGGGGGGG 566


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.156    0.537 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,241
Number of Sequences: 2352
Number of extensions: 12306
Number of successful extensions: 57
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 145922679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)