Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_G08
         (1218 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0152 - 1168928-1169377                                          188   6e-48
11_01_0155 - 1287003-1287452                                          188   6e-48
07_03_1553 - 27653473-27653490,27653634-27653673,27653852-276539...    33   0.60 

>12_01_0152 - 1168928-1169377
          Length = 149

 Score =  188 bits (459), Expect = 6e-48
 Identities = 85/143 (59%), Positives = 106/143 (74%)
 Frame = -2

Query: 620 REPXQAVQVFGRKKTXXXVAYCKRGHGMLXVNGRPLDLVEPRLLQYXXQEPILLLGKEKX 441
           R P   VQ FGRKKT   V+YCK G G++ VNG P++L+ P +L+    EPILL G+ + 
Sbjct: 7   RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRF 66

Query: 440 XMVDIRVTVKGGGHVAQVYAIRQAISKAXIXFYQKYVDEASKKXIXDILVXYDRXLLVAD 261
             +D+R+ V+GGG  +Q+YAIRQAI+KA + +YQKYVDEASKK + DI   YDR LLVAD
Sbjct: 67  KDIDMRIRVRGGGKTSQIYAIRQAIAKALVAYYQKYVDEASKKEVKDIFARYDRTLLVAD 126

Query: 260 PRRCEPKKFGGPGARARYXKXYR 192
           PRRCEPKKFGG GARAR+ K YR
Sbjct: 127 PRRCEPKKFGGRGARARFQKSYR 149


>11_01_0155 - 1287003-1287452
          Length = 149

 Score =  188 bits (459), Expect = 6e-48
 Identities = 85/143 (59%), Positives = 106/143 (74%)
 Frame = -2

Query: 620 REPXQAVQVFGRKKTXXXVAYCKRGHGMLXVNGRPLDLVEPRLLQYXXQEPILLLGKEKX 441
           R P   VQ FGRKKT   V+YCK G G++ VNG P++L+ P +L+    EPILL G+ + 
Sbjct: 7   RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRF 66

Query: 440 XMVDIRVTVKGGGHVAQVYAIRQAISKAXIXFYQKYVDEASKKXIXDILVXYDRXLLVAD 261
             +D+R+ V+GGG  +Q+YAIRQAI+KA + +YQKYVDEASKK + DI   YDR LLVAD
Sbjct: 67  KDIDMRIRVRGGGKTSQIYAIRQAIAKALVAYYQKYVDEASKKEVKDIFARYDRTLLVAD 126

Query: 260 PRRCEPKKFGGPGARARYXKXYR 192
           PRRCEPKKFGG GARAR+ K YR
Sbjct: 127 PRRCEPKKFGGRGARARFQKSYR 149


>07_03_1553 -
           27653473-27653490,27653634-27653673,27653852-27653939,
           27654150-27654230,27654644-27655084,27655692-27656325
          Length = 433

 Score = 32.7 bits (71), Expect = 0.60
 Identities = 24/78 (30%), Positives = 34/78 (43%)
 Frame = -2

Query: 590 GRKKTXXXVAYCKRGHGMLXVNGRPLDLVEPRLLQYXXQEPILLLGKEKXXMVDIRVTVK 411
           G++K      + + G G   VN +  D   P +L +           +     D+  TVK
Sbjct: 295 GKRKCSIARVWIQPGDGKFIVNDKQFDSYFP-ILDHRADLLRPFTVTKTLGRWDVTCTVK 353

Query: 410 GGGHVAQVYAIRQAISKA 357
           GGG   QV AIR  IS+A
Sbjct: 354 GGGVSGQVGAIRLGISRA 371


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,113,037
Number of Sequences: 37544
Number of extensions: 304415
Number of successful extensions: 504
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 504
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3736328292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)