Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_G07
         (1226 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0180 + 15502809-15503312,15503399-15503454,15503934-155040...    50   5e-06
01_07_0173 + 41708463-41708709,41709285-41709606,41710389-41710638     39   0.007
03_01_0359 - 2805094-2805175,2805256-2805347,2805443-2805517,280...    38   0.016
02_05_0251 - 27155905-27156127,27156228-27156697                       34   0.26 
01_06_0088 + 26305326-26306372                                         31   1.4  
06_03_1514 + 30696632-30696724,30696857-30697009,30697226-306973...    31   1.9  
11_01_0692 - 5700394-5700474,5700546-5702675,5705033-5706169,570...    30   4.3  

>10_08_0180 +
           15502809-15503312,15503399-15503454,15503934-15504053,
           15504190-15504260,15504603-15504696,15504772-15504978,
           15505406-15505657,15505781-15505889,15506112-15506179,
           15506278-15506347,15506429-15506503,15506600-15506691,
           15506779-15506860
          Length = 599

 Score = 49.6 bits (113), Expect = 5e-06
 Identities = 19/70 (27%), Positives = 45/70 (64%)
 Frame = +2

Query: 716 LNPDQLLKYLMFTLDKYVEQDYSVVYFHYGLNSKNKPPLSWLWKAYKAFDRKYKKNLKAL 895
           L+ ++ + +++   +  +++ YS+VYFH   + + +P L ++ +  +   RK+++NL A+
Sbjct: 460 LDLERFVLHVVKEFEPLIQKPYSIVYFHSAASLQPQPDLGFMKRLQQILGRKHQRNLHAI 519

Query: 896 YLVHPTNVIR 925
           Y++HPT  +R
Sbjct: 520 YVLHPTLGLR 529


>01_07_0173 + 41708463-41708709,41709285-41709606,41710389-41710638
          Length = 272

 Score = 39.1 bits (87), Expect = 0.007
 Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
 Frame = +2

Query: 704 PSNELNPDQLLKYLMFTL-DKYVEQDYSVVYFHYGLNSK-NKPPLSWLWKAYKAFDRKYK 877
           P+  +  D+L KY++  L  +  E  + ++Y H  + S  N P +S L   Y+    +YK
Sbjct: 101 PAPVIGGDRLKKYVLHKLRTELPEGPFCLLYMHSTVQSDDNNPGMSILRGVYEDLPPEYK 160

Query: 878 KNLKALYLVHP 910
           + L+ LY +HP
Sbjct: 161 ERLQILYFLHP 171


>03_01_0359 -
           2805094-2805175,2805256-2805347,2805443-2805517,
           2805582-2805675,2805769-2805872,2806777-2806885,
           2807397-2807609,2808170-2808289,2809060-2809115,
           2809210-2809287,2809374-2809733
          Length = 460

 Score = 37.9 bits (84), Expect = 0.016
 Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 8/61 (13%)
 Frame = +2

Query: 767 VEQDYSVVYFHYGLNSKNKPPLSWLWKAYKAFDRKYKKNL--------KALYLVHPTNVI 922
           +++ YS+VYFH   + + +P L ++ +  +   RK+++NL         A+Y++HPT  +
Sbjct: 330 IQKPYSIVYFHSAASLQVRPDLGFMKRLQQILGRKHQRNLHVGISYDHTAIYVLHPTLGL 389

Query: 923 R 925
           R
Sbjct: 390 R 390


>02_05_0251 - 27155905-27156127,27156228-27156697
          Length = 230

 Score = 33.9 bits (74), Expect = 0.26
 Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
 Frame = +2

Query: 770 EQDYSVVYFHYGLN-SKNKPPLSWLWKAYKAFDRKYKKNLKALYLVHP 910
           E+++ VVY H  ++   N P ++ +  AY+A     K+ L+A+Y VHP
Sbjct: 91  EREFVVVYVHSLVDRGDNFPGVAAIRAAYEALPAAAKERLRAVYFVHP 138


>01_06_0088 + 26305326-26306372
          Length = 348

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -1

Query: 626 CSNRRMLLRLIQTPQSQCK-PRVPGPIPLQNSLR*CRRWLFYLKVL 492
           C++  + LRL Q P +  + P  P P PL + LR C R  F+L  L
Sbjct: 96  CASLPIKLRLSQQPPAAKRSPSSPPPPPLADFLRPCARSFFFLSCL 141


>06_03_1514 +
           30696632-30696724,30696857-30697009,30697226-30697309,
           30697451-30697569,30697769-30697870,30699071-30699190,
           30699285-30699350,30699563-30699629,30699720-30699773,
           30700379-30700534,30701130-30701228
          Length = 370

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +2

Query: 761 KYVEQDYSVVYFHYGLNSKNKPPLSWLWKAYKAFDRKYKKNLKALYLVHP 910
           K++ Q+Y+V+ FHY  N      L W  KA     R   K   A   +HP
Sbjct: 110 KFLNQNYTVMLFHYDGNVDGWHNLEWSDKAIHILARNQTKWWFAKRFLHP 159


>11_01_0692 - 5700394-5700474,5700546-5702675,5705033-5706169,
            5709679-5709975
          Length = 1214

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +3

Query: 642  K*WAMMRSDGV*SSWQLAACHPATS 716
            K W ++RSDG+ SSW   A H +TS
Sbjct: 1076 KKWTIVRSDGIISSWAGNAPHTSTS 1100


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,307,727
Number of Sequences: 37544
Number of extensions: 529376
Number of successful extensions: 1052
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1052
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3771247248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)