Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_G07
         (1226 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66521-13|CAA91403.1|  444|Caenorhabditis elegans Hypothetical p...   122   7e-28
U64842-1|AAB37083.2|  710|Caenorhabditis elegans Hypothetical pr...    33   0.41 

>Z66521-13|CAA91403.1|  444|Caenorhabditis elegans Hypothetical
           protein W02B12.8a protein.
          Length = 444

 Score =  122 bits (293), Expect = 7e-28
 Identities = 53/96 (55%), Positives = 73/96 (76%)
 Frame = +2

Query: 689 ACRLPPSNELNPDQLLKYLMFTLDKYVEQDYSVVYFHYGLNSKNKPPLSWLWKAYKAFDR 868
           A RLP S E++  +LL+YL+  +DK V+QDY++VYFHYGL S NKPP+ WL++AYK  DR
Sbjct: 100 AYRLPSSKEIDHARLLQYLVQIIDKIVDQDYTIVYFHYGLRSHNKPPVRWLFQAYKQLDR 159

Query: 869 KYKKNLKALYLVHPTNVIRVVWQMLRPAISVKSGRK 976
           ++KKNLKALY+VHPT  IR+++ + +  IS K   K
Sbjct: 160 RFKKNLKALYVVHPTRFIRIIFSLFKGFISSKFENK 195


>U64842-1|AAB37083.2|  710|Caenorhabditis elegans Hypothetical
           protein F25B4.5 protein.
          Length = 710

 Score = 33.1 bits (72), Expect = 0.41
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = -2

Query: 541 KILFDSAVVGCSI*KFFWNV*QLRWQWC*TRSMDQFRVIKFKA 413
           KILFD  ++ CS+ + FW +   RW W   +S  + R I  KA
Sbjct: 404 KILFDRCLIPCSLYEEFW-IKYARWTWKTYKSKTKSREIYMKA 445


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,947,403
Number of Sequences: 27780
Number of extensions: 496505
Number of successful extensions: 966
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3391198850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)