Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_G07
         (1226 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   4.1  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   5.4  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    22   9.5  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +3

Query: 309 NPNLIRSGPFKFYMVVM-GKQRKITLVFLSTMTMNQALNLM 428
           NP L RS  +K Y+  M   + + T VFL  M  N  L+++
Sbjct: 678 NPKLARSVLYKIYLNTMESHEVRCTAVFL-LMKTNPPLSML 717


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 353 CNGETEENYTSLSEYHD 403
           CN E EENY  L + ++
Sbjct: 110 CNVEAEENYNLLEDIYE 126


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 755 LDKYVEQDYSVVYF 796
           + KY +QDY  +YF
Sbjct: 428 VQKYQDQDYQPIYF 441


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 298,897
Number of Sequences: 438
Number of extensions: 6981
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 41781924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)