Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_G06
         (1321 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            29   0.40 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   4.9  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   4.9  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    25   6.5  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 28.7 bits (61), Expect = 0.40
 Identities = 23/102 (22%), Positives = 26/102 (25%)
 Frame = +3

Query: 495 GPAAXGGGXGXXXGGXPVXXPXGGXPGXNLXGXGXXXXPPXGXXPXXXXFXXXPPPRWXX 674
           GP    G  G    G P+  P    PG  +        PP         F   P      
Sbjct: 511 GPPHGAGYDGRDLTGGPLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFP 570

Query: 675 XXGPSXXGGXPPXGXXXXPXXXPPXXLPGXXPXFXPWGXXXP 800
              P+     PP      P   PP       P   P G   P
Sbjct: 571 AGFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPP 612



 Score = 24.6 bits (51), Expect = 6.5
 Identities = 17/66 (25%), Positives = 18/66 (27%), Gaps = 2/66 (3%)
 Frame = -1

Query: 574 PGXPPXGXXTGXPPXXXPXPPPXAAGPXXEXKRGXXXXXG--PQNXXPRPPGWARFPNPX 401
           P  PP G     PP   P P      P               P     +PP     P P 
Sbjct: 532 PPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPPPM 591

Query: 400 XTPPXP 383
             PP P
Sbjct: 592 GPPPSP 597


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 4.9
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -3

Query: 758 GXPXGGXXPGXXXXPXGGXTPGXGG 684
           G   GG  PG      GG  PG GG
Sbjct: 204 GGGSGGGAPGGGGGSSGGPGPGGGG 228


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.0 bits (52), Expect = 4.9
 Identities = 15/62 (24%), Positives = 17/62 (27%)
 Frame = +1

Query: 697 GVXPPXGXXXXPGXXPPXGXPXXXPXSXRGXPXPXXXFPPXGXPGXXXXPXPXXXPXXXX 876
           G+    G    PG     G     P   +G P P     P G  G      P   P    
Sbjct: 687 GLPGMSGLNGAPGEKGQKGETPQLPPQRKGPPGPPGFNGPKGDKGLPGLAGPAGIPGAPG 746

Query: 877 GP 882
            P
Sbjct: 747 AP 748


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 24.6 bits (51), Expect = 6.5
 Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
 Frame = +2

Query: 650 GPPPP-VXXPXXXLXXRGXXPR-GVXXXXXGVPPLXAXRXXPRXPPVGXPXPXPXF--PL 817
           GPP P +  P   +      PR G+     G PPL      P  PP+    P P     +
Sbjct: 70  GPPKPNISIPPPTM---NMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPPMMVPTM 126

Query: 818 XVPP 829
            +PP
Sbjct: 127 GMPP 130


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,231
Number of Sequences: 2352
Number of extensions: 11475
Number of successful extensions: 32
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 152462631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)